Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2680:A2498
Extra
PDB:
ATOM 1 O3' A A2679 47.366 161.729 111.285 1.00 38.32 O
ATOM 2 P A A2680 45.790 161.955 111.557 1.00 38.22 P
ATOM 3 OP1 A A2680 45.588 163.408 111.467 1.00 38.15 O
ATOM 4 OP2 A A2680 45.372 161.243 112.777 1.00 36.54 O
ATOM 5 O5' A A2680 45.046 161.328 110.292 1.00 36.70 O
ATOM 6 C5' A A2680 45.109 161.988 109.005 1.00 38.33 C
ATOM 7 C4' A A2680 44.085 161.418 108.051 1.00 39.47 C
ATOM 8 O4' A A2680 44.364 160.018 107.857 1.00 39.44 O
ATOM 9 C3' A A2680 42.641 161.466 108.518 1.00 40.13 C
ATOM 10 O3' A A2680 42.010 162.704 108.214 1.00 38.52 O
ATOM 11 C2' A A2680 42.013 160.312 107.755 1.00 40.97 C
ATOM 12 O2' A A2680 41.724 160.643 106.407 1.00 43.00 O
ATOM 13 C1' A A2680 43.152 159.294 107.781 1.00 40.65 C
ATOM 14 N9 A A2680 43.130 158.355 108.901 1.00 40.43 N
ATOM 15 C8 A A2680 43.834 158.424 110.076 1.00 41.44 C
ATOM 16 N7 A A2680 43.637 157.401 110.867 1.00 41.69 N
ATOM 17 C5 A A2680 42.738 156.612 110.168 1.00 40.80 C
ATOM 18 C6 A A2680 42.145 155.384 110.458 1.00 40.55 C
ATOM 19 N6 A A2680 42.374 154.707 111.582 1.00 40.43 N
ATOM 20 N1 A A2680 41.299 154.867 109.547 1.00 40.88 N
ATOM 21 C2 A A2680 41.079 155.553 108.423 1.00 40.89 C
ATOM 22 N3 A A2680 41.580 156.715 108.037 1.00 40.88 N
ATOM 23 C4 A A2680 42.411 157.195 108.965 1.00 40.22 C
ATOM 24 P G A2681 41.358 163.560 109.391 1.00 41.09 P
ATOM 25 OP1 G A2681 40.572 164.641 108.765 1.00 43.66 O
ATOM 26 OP2 G A2681 42.465 163.909 110.314 1.00 38.13 O
ATOM 27 O5' G A2681 40.331 162.563 110.104 1.00 39.65 O
TER
ATOM 1 O3' G B2497 44.629 150.731 119.915 1.00 33.92 O
ATOM 2 P G B2498 43.086 151.138 119.892 1.00 36.98 P
ATOM 3 OP1 G B2498 42.888 152.063 121.026 1.00 38.56 O
ATOM 4 OP2 G B2498 42.288 149.891 119.822 1.00 35.67 O
ATOM 5 O5' G B2498 42.948 151.939 118.522 1.00 35.66 O
ATOM 6 C5' G B2498 43.811 153.044 118.227 1.00 34.24 C
ATOM 7 C4' G B2498 43.482 153.632 116.873 1.00 35.86 C
ATOM 8 O4' G B2498 43.857 152.716 115.801 1.00 34.82 O
ATOM 9 C3' G B2498 42.010 153.886 116.606 1.00 36.07 C
ATOM 10 O3' G B2498 41.507 155.043 117.254 1.00 39.67 O
ATOM 11 C2' G B2498 42.017 154.024 115.095 1.00 35.34 C
ATOM 12 O2' G B2498 42.585 155.260 114.708 1.00 32.28 O
ATOM 13 C1' G B2498 42.963 152.878 114.702 1.00 35.33 C
ATOM 14 N9 G B2498 42.266 151.607 114.466 1.00 34.44 N
ATOM 15 C8 G B2498 42.261 150.508 115.290 1.00 34.46 C
ATOM 16 N7 G B2498 41.500 149.541 114.856 1.00 33.52 N
ATOM 17 C5 G B2498 40.985 150.012 113.656 1.00 33.75 C
ATOM 18 C6 G B2498 40.084 149.401 112.734 1.00 34.20 C
ATOM 19 O6 G B2498 39.541 148.290 112.798 1.00 36.62 O
ATOM 20 N1 G B2498 39.815 150.233 111.658 1.00 33.12 N
ATOM 21 C2 G B2498 40.319 151.490 111.488 1.00 32.55 C
ATOM 22 N2 G B2498 39.908 152.138 110.398 1.00 32.24 N
ATOM 23 N3 G B2498 41.157 152.074 112.329 1.00 32.75 N
ATOM 24 C4 G B2498 41.448 151.282 113.389 1.00 33.60 C
ATOM 25 P G B2499 39.926 155.203 117.466 1.00 41.06 P
ATOM 26 OP1 G B2499 39.800 156.274 118.475 1.00 39.39 O
ATOM 27 OP2 G B2499 39.328 153.863 117.735 1.00 40.90 O
ATOM 28 O5' G B2499 39.417 155.717 116.039 1.00 41.77 O
TER
ATOM 2 P A A2680 45.790 161.955 111.557 1.00 38.22 P
ATOM 3 OP1 A A2680 45.588 163.408 111.467 1.00 38.15 O
ATOM 4 OP2 A A2680 45.372 161.243 112.777 1.00 36.54 O
ATOM 5 O5' A A2680 45.046 161.328 110.292 1.00 36.70 O
ATOM 6 C5' A A2680 45.109 161.988 109.005 1.00 38.33 C
ATOM 7 C4' A A2680 44.085 161.418 108.051 1.00 39.47 C
ATOM 8 O4' A A2680 44.364 160.018 107.857 1.00 39.44 O
ATOM 9 C3' A A2680 42.641 161.466 108.518 1.00 40.13 C
ATOM 10 O3' A A2680 42.010 162.704 108.214 1.00 38.52 O
ATOM 11 C2' A A2680 42.013 160.312 107.755 1.00 40.97 C
ATOM 12 O2' A A2680 41.724 160.643 106.407 1.00 43.00 O
ATOM 13 C1' A A2680 43.152 159.294 107.781 1.00 40.65 C
ATOM 14 N9 A A2680 43.130 158.355 108.901 1.00 40.43 N
ATOM 15 C8 A A2680 43.834 158.424 110.076 1.00 41.44 C
ATOM 16 N7 A A2680 43.637 157.401 110.867 1.00 41.69 N
ATOM 17 C5 A A2680 42.738 156.612 110.168 1.00 40.80 C
ATOM 18 C6 A A2680 42.145 155.384 110.458 1.00 40.55 C
ATOM 19 N6 A A2680 42.374 154.707 111.582 1.00 40.43 N
ATOM 20 N1 A A2680 41.299 154.867 109.547 1.00 40.88 N
ATOM 21 C2 A A2680 41.079 155.553 108.423 1.00 40.89 C
ATOM 22 N3 A A2680 41.580 156.715 108.037 1.00 40.88 N
ATOM 23 C4 A A2680 42.411 157.195 108.965 1.00 40.22 C
ATOM 24 P G A2681 41.358 163.560 109.391 1.00 41.09 P
ATOM 25 OP1 G A2681 40.572 164.641 108.765 1.00 43.66 O
ATOM 26 OP2 G A2681 42.465 163.909 110.314 1.00 38.13 O
ATOM 27 O5' G A2681 40.331 162.563 110.104 1.00 39.65 O
TER
ATOM 1 O3' G B2497 44.629 150.731 119.915 1.00 33.92 O
ATOM 2 P G B2498 43.086 151.138 119.892 1.00 36.98 P
ATOM 3 OP1 G B2498 42.888 152.063 121.026 1.00 38.56 O
ATOM 4 OP2 G B2498 42.288 149.891 119.822 1.00 35.67 O
ATOM 5 O5' G B2498 42.948 151.939 118.522 1.00 35.66 O
ATOM 6 C5' G B2498 43.811 153.044 118.227 1.00 34.24 C
ATOM 7 C4' G B2498 43.482 153.632 116.873 1.00 35.86 C
ATOM 8 O4' G B2498 43.857 152.716 115.801 1.00 34.82 O
ATOM 9 C3' G B2498 42.010 153.886 116.606 1.00 36.07 C
ATOM 10 O3' G B2498 41.507 155.043 117.254 1.00 39.67 O
ATOM 11 C2' G B2498 42.017 154.024 115.095 1.00 35.34 C
ATOM 12 O2' G B2498 42.585 155.260 114.708 1.00 32.28 O
ATOM 13 C1' G B2498 42.963 152.878 114.702 1.00 35.33 C
ATOM 14 N9 G B2498 42.266 151.607 114.466 1.00 34.44 N
ATOM 15 C8 G B2498 42.261 150.508 115.290 1.00 34.46 C
ATOM 16 N7 G B2498 41.500 149.541 114.856 1.00 33.52 N
ATOM 17 C5 G B2498 40.985 150.012 113.656 1.00 33.75 C
ATOM 18 C6 G B2498 40.084 149.401 112.734 1.00 34.20 C
ATOM 19 O6 G B2498 39.541 148.290 112.798 1.00 36.62 O
ATOM 20 N1 G B2498 39.815 150.233 111.658 1.00 33.12 N
ATOM 21 C2 G B2498 40.319 151.490 111.488 1.00 32.55 C
ATOM 22 N2 G B2498 39.908 152.138 110.398 1.00 32.24 N
ATOM 23 N3 G B2498 41.157 152.074 112.329 1.00 32.75 N
ATOM 24 C4 G B2498 41.448 151.282 113.389 1.00 33.60 C
ATOM 25 P G B2499 39.926 155.203 117.466 1.00 41.06 P
ATOM 26 OP1 G B2499 39.800 156.274 118.475 1.00 39.39 O
ATOM 27 OP2 G B2499 39.328 153.863 117.735 1.00 40.90 O
ATOM 28 O5' G B2499 39.417 155.717 116.039 1.00 41.77 O
TER
Atoms:
OP1: (45.588,163.408,111.467)
OP2: (45.372,161.243,112.777)
C3': (42.641,161.466,108.518)
C1': (43.152,159.294,107.781)
C5': (45.109,161.988,109.005)
O4': (44.364,160.018,107.857)
C8: (43.834,158.424,110.076)
O2': (41.724,160.643,106.407)
C6: (42.145,155.384,110.458)
C5: (42.738,156.612,110.168)
C4: (42.411,157.195,108.965)
P: (45.790,161.955,111.557)
C4': (44.085,161.418,108.051)
C2': (42.013,160.312,107.755)
C2: (41.079,155.553,108.423)
N1: (41.299,154.867,109.547)
N3: (41.580,156.715,108.037)
N6: (42.374,154.707,111.582)
N7: (43.637,157.401,110.867)
N9: (43.130,158.355,108.901)
O5': (45.046,161.328,110.292)
O3': (42.010,162.704,108.214)
OP2: (45.372,161.243,112.777)
C3': (42.641,161.466,108.518)
C1': (43.152,159.294,107.781)
C5': (45.109,161.988,109.005)
O4': (44.364,160.018,107.857)
C8: (43.834,158.424,110.076)
O2': (41.724,160.643,106.407)
C6: (42.145,155.384,110.458)
C5: (42.738,156.612,110.168)
C4: (42.411,157.195,108.965)
P: (45.790,161.955,111.557)
C4': (44.085,161.418,108.051)
C2': (42.013,160.312,107.755)
C2: (41.079,155.553,108.423)
N1: (41.299,154.867,109.547)
N3: (41.580,156.715,108.037)
N6: (42.374,154.707,111.582)
N7: (43.637,157.401,110.867)
N9: (43.130,158.355,108.901)
O5': (45.046,161.328,110.292)
O3': (42.010,162.704,108.214)
OP1: (42.888,152.063,121.026)
OP2: (42.288,149.891,119.822)
C3': (42.010,153.886,116.606)
C1': (42.963,152.878,114.702)
C5': (43.811,153.044,118.227)
O6: (39.541,148.290,112.798)
O4': (43.857,152.716,115.801)
C8: (42.261,150.508,115.290)
C2: (40.319,151.490,111.488)
C6: (40.084,149.401,112.734)
C5: (40.985,150.012,113.656)
C4: (41.448,151.282,113.389)
P: (43.086,151.138,119.892)
C4': (43.482,153.632,116.873)
C2': (42.017,154.024,115.095)
O2': (42.585,155.260,114.708)
N1: (39.815,150.233,111.658)
N2: (39.908,152.138,110.398)
N3: (41.157,152.074,112.329)
N7: (41.500,149.541,114.856)
N9: (42.266,151.607,114.466)
O5': (42.948,151.939,118.522)
O3': (41.507,155.043,117.254)
OP2: (42.288,149.891,119.822)
C3': (42.010,153.886,116.606)
C1': (42.963,152.878,114.702)
C5': (43.811,153.044,118.227)
O6: (39.541,148.290,112.798)
O4': (43.857,152.716,115.801)
C8: (42.261,150.508,115.290)
C2: (40.319,151.490,111.488)
C6: (40.084,149.401,112.734)
C5: (40.985,150.012,113.656)
C4: (41.448,151.282,113.389)
P: (43.086,151.138,119.892)
C4': (43.482,153.632,116.873)
C2': (42.017,154.024,115.095)
O2': (42.585,155.260,114.708)
N1: (39.815,150.233,111.658)
N2: (39.908,152.138,110.398)
N3: (41.157,152.074,112.329)
N7: (41.500,149.541,114.856)
N9: (42.266,151.607,114.466)
O5': (42.948,151.939,118.522)
O3': (41.507,155.043,117.254)
Image (generated by PyMOL):