ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MZP:B41:B10

Extra

PDB:
ATOM 1 O3' A A 40 17.355 64.238 9.085 1.00 36.55 O
ATOM 2 P A A 41 16.081 63.868 8.181 1.00 36.33 P
ATOM 3 OP1 A A 41 16.512 62.860 7.185 1.00 39.71 O
ATOM 4 OP2 A A 41 15.538 65.163 7.713 1.00 37.10 O
ATOM 5 O5' A A 41 15.060 63.166 9.193 1.00 37.42 O
ATOM 6 C5' A A 41 15.245 61.818 9.658 1.00 37.74 C
ATOM 7 C4' A A 41 13.901 61.221 10.047 1.00 41.15 C
ATOM 8 O4' A A 41 13.284 62.129 10.983 1.00 41.20 O
ATOM 9 C3' A A 41 12.909 61.133 8.889 1.00 42.76 C
ATOM 10 O3' A A 41 12.765 59.830 8.276 1.00 45.12 O
ATOM 11 C2' A A 41 11.544 61.463 9.488 1.00 43.05 C
ATOM 12 O2' A A 41 10.718 60.327 9.591 1.00 49.81 O
ATOM 13 C1' A A 41 11.889 62.008 10.873 1.00 42.25 C
ATOM 14 N9 A A 41 11.253 63.265 11.246 1.00 38.61 N
ATOM 15 C8 A A 41 11.015 64.385 10.494 1.00 37.81 C
ATOM 16 N7 A A 41 10.415 65.345 11.156 1.00 37.20 N
ATOM 17 C5 A A 41 10.253 64.818 12.431 1.00 35.09 C
ATOM 18 C6 A A 41 9.697 65.342 13.610 1.00 35.53 C
ATOM 19 N6 A A 41 9.190 66.574 13.704 1.00 33.82 N
ATOM 20 N1 A A 41 9.685 64.546 14.709 1.00 33.93 N
ATOM 21 C2 A A 41 10.205 63.318 14.612 1.00 30.97 C
ATOM 22 N3 A A 41 10.762 62.720 13.562 1.00 30.74 N
ATOM 23 C4 A A 41 10.755 63.535 12.494 1.00 34.61 C
ATOM 24 P U A 42 13.087 58.452 9.084 1.00 42.95 P
ATOM 25 OP1 U A 42 14.483 58.401 9.586 1.00 41.05 O
ATOM 26 OP2 U A 42 12.611 57.412 8.144 1.00 42.58 O
ATOM 27 O5' U A 42 12.062 58.378 10.304 1.00 42.83 O
TER

ATOM 1 O3' A B 9 5.954 74.801 16.348 1.00 40.93 O
ATOM 2 P G B 10 4.650 73.868 16.376 1.00 43.91 P
ATOM 3 OP1 G B 10 3.637 74.508 15.497 1.00 43.21 O
ATOM 4 OP2 G B 10 4.303 73.545 17.788 1.00 42.43 O
ATOM 5 O5' G B 10 5.130 72.507 15.705 1.00 45.71 O
ATOM 6 C5' G B 10 5.304 72.387 14.297 1.00 46.40 C
ATOM 7 C4' G B 10 5.678 70.969 13.961 1.00 48.70 C
ATOM 8 O4' G B 10 6.951 70.659 14.583 1.00 48.30 O
ATOM 9 C3' G B 10 4.722 69.916 14.502 1.00 51.11 C
ATOM 10 O3' G B 10 3.703 69.694 13.532 1.00 55.99 O
ATOM 11 C2' G B 10 5.619 68.688 14.608 1.00 49.04 C
ATOM 12 O2' G B 10 5.761 68.020 13.375 1.00 50.06 O
ATOM 13 C1' G B 10 6.962 69.306 15.004 1.00 47.50 C
ATOM 14 N9 G B 10 7.177 69.275 16.445 1.00 44.95 N
ATOM 15 C8 G B 10 6.882 70.272 17.341 1.00 43.81 C
ATOM 16 N7 G B 10 7.091 69.924 18.580 1.00 42.57 N
ATOM 17 C5 G B 10 7.568 68.624 18.497 1.00 41.52 C
ATOM 18 C6 G B 10 7.929 67.716 19.520 1.00 40.30 C
ATOM 19 O6 G B 10 7.881 67.878 20.741 1.00 41.51 O
ATOM 20 N1 G B 10 8.372 66.505 18.999 1.00 39.95 N
ATOM 21 C2 G B 10 8.452 66.202 17.664 1.00 40.72 C
ATOM 22 N2 G B 10 8.914 64.977 17.372 1.00 42.51 N
ATOM 23 N3 G B 10 8.105 67.037 16.693 1.00 40.24 N
ATOM 24 C4 G B 10 7.666 68.221 17.182 1.00 43.05 C
ATOM 25 P G B 11 2.178 69.433 13.981 1.00 59.18 P
ATOM 26 OP1 G B 11 1.846 68.032 13.598 1.00 57.59 O
ATOM 27 OP2 G B 11 1.370 70.566 13.446 1.00 57.81 O
ATOM 28 O5' G B 11 2.150 69.505 15.571 1.00 58.88 O
TER

Atoms:
OP1: (16.512,62.860,7.185)
OP2: (15.538,65.163,7.713)
C3': (12.909,61.133,8.889)
C1': (11.889,62.008,10.873)
C5': (15.245,61.818,9.658)
O4': (13.284,62.129,10.983)
C8: (11.015,64.385,10.494)
O2': (10.718,60.327,9.591)
C6: (9.697,65.342,13.610)
C5: (10.253,64.818,12.431)
C4: (10.755,63.535,12.494)
P: (16.081,63.868,8.181)
C4': (13.901,61.221,10.047)
C2': (11.544,61.463,9.488)
C2: (10.205,63.318,14.612)
N1: (9.685,64.546,14.709)
N3: (10.762,62.720,13.562)
N6: (9.190,66.574,13.704)
N7: (10.415,65.345,11.156)
N9: (11.253,63.265,11.246)
O5': (15.060,63.166,9.193)
O3': (12.765,59.830,8.276)
OP1: (3.637,74.508,15.497)
OP2: (4.303,73.545,17.788)
C3': (4.722,69.916,14.502)
C1': (6.962,69.306,15.004)
C5': (5.304,72.387,14.297)
O6: (7.881,67.878,20.741)
O4': (6.951,70.659,14.583)
C8: (6.882,70.272,17.341)
C2: (8.452,66.202,17.664)
C6: (7.929,67.716,19.520)
C5: (7.568,68.624,18.497)
C4: (7.666,68.221,17.182)
P: (4.650,73.868,16.376)
C4': (5.678,70.969,13.961)
C2': (5.619,68.688,14.608)
O2': (5.761,68.020,13.375)
N1: (8.372,66.505,18.999)
N2: (8.914,64.977,17.372)
N3: (8.105,67.037,16.693)
N7: (7.091,69.924,18.580)
N9: (7.177,69.275,16.445)
O5': (5.130,72.507,15.705)
O3': (3.703,69.694,13.532)
Image (generated by PyMOL):
PyMOL image
show in jmol