ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GER:A51:A23

Extra

PDB:
ATOM 1 O3' A A 50 40.028 21.865 3.922 1.00 19.24 O
ATOM 2 P A A 51 38.752 22.586 3.269 1.00 19.29 P
ATOM 3 OP1 A A 51 39.126 23.009 1.884 1.00 21.44 O
ATOM 4 OP2 A A 51 38.213 23.585 4.221 1.00 20.25 O
ATOM 5 O5' A A 51 37.694 21.401 3.149 1.00 19.86 O
ATOM 6 C5' A A 51 37.363 20.596 4.285 1.00 17.41 C
ATOM 7 C4' A A 51 37.654 19.140 3.994 1.00 15.50 C
ATOM 8 O4' A A 51 38.999 18.795 4.431 1.00 15.02 O
ATOM 9 C3' A A 51 36.806 18.132 4.741 1.00 14.27 C
ATOM 10 O3' A A 51 35.499 18.024 4.209 1.00 13.10 O
ATOM 11 C2' A A 51 37.637 16.875 4.550 1.00 14.04 C
ATOM 12 O2' A A 51 37.582 16.360 3.231 1.00 15.24 O
ATOM 13 C1' A A 51 39.022 17.435 4.864 1.00 14.52 C
ATOM 14 N9 A A 51 39.212 17.404 6.314 1.00 12.37 N
ATOM 15 C8 A A 51 39.127 18.420 7.233 1.00 12.76 C
ATOM 16 N7 A A 51 39.262 18.020 8.478 1.00 12.67 N
ATOM 17 C5 A A 51 39.468 16.651 8.365 1.00 11.83 C
ATOM 18 C6 A A 51 39.657 15.639 9.322 1.00 13.43 C
ATOM 19 N6 A A 51 39.660 15.855 10.644 1.00 13.47 N
ATOM 20 N1 A A 51 39.836 14.377 8.871 1.00 14.44 N
ATOM 21 C2 A A 51 39.813 14.156 7.552 1.00 13.45 C
ATOM 22 N3 A A 51 39.631 15.022 6.556 1.00 12.82 N
ATOM 23 C4 A A 51 39.461 16.264 7.037 1.00 12.39 C
ATOM 24 P U A 52 34.242 18.061 5.203 1.00 12.62 P
ATOM 25 OP1 U A 52 32.998 17.746 4.465 1.00 13.16 O
ATOM 26 OP2 U A 52 34.332 19.334 5.972 1.00 14.40 O
ATOM 27 O5' U A 52 34.547 16.876 6.225 1.00 13.53 O
TER

ATOM 1 O3' G B 22 37.133 16.248 19.015 1.00 12.19 O
ATOM 2 P G B 23 35.753 15.471 18.752 1.00 13.20 P
ATOM 3 OP1 G B 23 34.655 16.303 19.290 1.00 14.29 O
ATOM 4 OP2 G B 23 35.891 14.046 19.184 1.00 14.86 O
ATOM 5 O5' G B 23 35.630 15.446 17.164 1.00 12.47 O
ATOM 6 C5' G B 23 35.426 16.654 16.431 1.00 12.92 C
ATOM 7 C4' G B 23 35.551 16.383 14.950 1.00 12.40 C
ATOM 8 O4' G B 23 36.913 15.992 14.665 1.00 11.87 O
ATOM 9 C3' G B 23 34.693 15.243 14.424 1.00 12.95 C
ATOM 10 O3' G B 23 33.400 15.739 14.085 1.00 14.17 O
ATOM 11 C2' G B 23 35.477 14.803 13.188 1.00 12.15 C
ATOM 12 O2' G B 23 35.229 15.594 12.039 1.00 13.09 O
ATOM 13 C1' G B 23 36.926 15.013 13.642 1.00 13.17 C
ATOM 14 N9 G B 23 37.496 13.781 14.178 1.00 13.95 N
ATOM 15 C8 G B 23 37.255 13.214 15.410 1.00 15.53 C
ATOM 16 N7 G B 23 37.791 12.029 15.538 1.00 14.57 N
ATOM 17 C5 G B 23 38.449 11.818 14.335 1.00 13.66 C
ATOM 18 C6 G B 23 39.165 10.687 13.865 1.00 14.25 C
ATOM 19 O6 G B 23 39.355 9.607 14.432 1.00 12.58 O
ATOM 20 N1 G B 23 39.667 10.894 12.588 1.00 12.53 N
ATOM 21 C2 G B 23 39.499 12.039 11.849 1.00 13.70 C
ATOM 22 N2 G B 23 40.071 12.046 10.637 1.00 12.13 N
ATOM 23 N3 G B 23 38.820 13.094 12.267 1.00 13.37 N
ATOM 24 C4 G B 23 38.318 12.912 13.506 1.00 14.16 C
ATOM 25 P C B 24 32.077 14.879 14.418 1.00 17.14 P
ATOM 26 OP1 C B 24 32.442 13.767 15.338 1.00 17.12 O
ATOM 27 OP2 C B 24 31.424 14.572 13.129 1.00 18.61 O
ATOM 28 O5' C B 24 31.065 15.956 15.050 1.00 20.82 O
TER

Atoms:
OP1: (39.126,23.009,1.884)
OP2: (38.213,23.585,4.221)
C3': (36.806,18.132,4.741)
C1': (39.022,17.435,4.864)
C5': (37.363,20.596,4.285)
O4': (38.999,18.795,4.431)
C8: (39.127,18.420,7.233)
O2': (37.582,16.360,3.231)
C6: (39.657,15.639,9.322)
C5: (39.468,16.651,8.365)
C4: (39.461,16.264,7.037)
P: (38.752,22.586,3.269)
C4': (37.654,19.140,3.994)
C2': (37.637,16.875,4.550)
C2: (39.813,14.156,7.552)
N1: (39.836,14.377,8.871)
N3: (39.631,15.022,6.556)
N6: (39.660,15.855,10.644)
N7: (39.262,18.020,8.478)
N9: (39.212,17.404,6.314)
O5': (37.694,21.401,3.149)
O3': (35.499,18.024,4.209)
OP1: (34.655,16.303,19.290)
OP2: (35.891,14.046,19.184)
C3': (34.693,15.243,14.424)
C1': (36.926,15.013,13.642)
C5': (35.426,16.654,16.431)
O6: (39.355,9.607,14.432)
O4': (36.913,15.992,14.665)
C8: (37.255,13.214,15.410)
C2: (39.499,12.039,11.849)
C6: (39.165,10.687,13.865)
C5: (38.449,11.818,14.335)
C4: (38.318,12.912,13.506)
P: (35.753,15.471,18.752)
C4': (35.551,16.383,14.950)
C2': (35.477,14.803,13.188)
O2': (35.229,15.594,12.039)
N1: (39.667,10.894,12.588)
N2: (40.071,12.046,10.637)
N3: (38.820,13.094,12.267)
N7: (37.791,12.029,15.538)
N9: (37.496,13.781,14.178)
O5': (35.630,15.446,17.164)
O3': (33.400,15.739,14.085)
Image (generated by PyMOL):
PyMOL image
show in jmol