Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0617:02016
Extra
PDB:
ATOM 1 P A A 617 39.261 111.855 95.466 1.00 35.17 P
ATOM 2 OP1 A A 617 39.093 110.659 96.318 1.00 34.96 O
ATOM 3 OP2 A A 617 38.562 111.918 94.157 1.00 35.91 O
ATOM 4 O5' A A 617 38.900 113.155 96.321 1.00 33.06 O
ATOM 5 C5' A A 617 38.383 114.356 95.698 1.00 32.42 C
ATOM 6 C4' A A 617 38.991 115.596 96.338 1.00 32.93 C
ATOM 7 O4' A A 617 38.685 115.599 97.760 1.00 36.40 O
ATOM 8 C3' A A 617 40.510 115.731 96.281 1.00 35.04 C
ATOM 9 O3' A A 617 40.953 116.348 95.074 1.00 32.13 O
ATOM 10 C2' A A 617 40.805 116.637 97.472 1.00 35.35 C
ATOM 11 O2' A A 617 40.550 118.000 97.192 1.00 34.39 O
ATOM 12 C1' A A 617 39.781 116.140 98.492 1.00 37.03 C
ATOM 13 N9 A A 617 40.308 115.110 99.398 1.00 37.72 N
ATOM 14 C8 A A 617 39.905 113.801 99.502 1.00 39.41 C
ATOM 15 N7 A A 617 40.554 113.118 100.410 1.00 40.69 N
ATOM 16 C5 A A 617 41.446 114.035 100.945 1.00 40.12 C
ATOM 17 C6 A A 617 42.415 113.929 101.962 1.00 41.40 C
ATOM 18 N6 A A 617 42.631 112.816 102.669 1.00 41.06 N
ATOM 19 N1 A A 617 43.154 115.020 102.237 1.00 38.31 N
ATOM 20 C2 A A 617 42.913 116.142 101.553 1.00 39.22 C
ATOM 21 N3 A A 617 42.022 116.373 100.595 1.00 38.69 N
ATOM 22 C4 A A 617 41.312 115.264 100.329 1.00 38.64 C
ATOM 23 P A A 618 42.301 115.849 94.353 1.00 35.72 P
ATOM 24 OP1 A A 618 42.381 116.669 93.128 1.00 41.18 O
ATOM 25 OP2 A A 618 42.338 114.373 94.244 1.00 36.88 O
ATOM 26 O5' A A 618 43.520 116.182 95.325 1.00 37.44 O
TER
ATOM 1 O3' U B2015 42.248 107.634 109.892 1.00 36.01 O
ATOM 2 P G B2016 43.470 106.899 109.153 1.00 35.96 P
ATOM 3 OP1 G B2016 43.086 105.470 108.971 1.00 35.52 O
ATOM 4 OP2 G B2016 44.734 107.228 109.859 1.00 40.82 O
ATOM 5 O5' G B2016 43.513 107.586 107.710 1.00 38.97 O
ATOM 6 C5' G B2016 42.402 107.487 106.800 1.00 36.07 C
ATOM 7 C4' G B2016 42.555 108.487 105.672 1.00 37.31 C
ATOM 8 O4' G B2016 42.481 109.836 106.195 1.00 37.78 O
ATOM 9 C3' G B2016 43.884 108.441 104.942 1.00 36.96 C
ATOM 10 O3' G B2016 43.843 107.414 103.958 1.00 38.23 O
ATOM 11 C2' G B2016 43.984 109.845 104.350 1.00 35.99 C
ATOM 12 O2' G B2016 43.240 110.044 103.173 1.00 35.50 O
ATOM 13 C1' G B2016 43.335 110.688 105.448 1.00 36.90 C
ATOM 14 N9 G B2016 44.318 111.293 106.346 1.00 37.72 N
ATOM 15 C8 G B2016 44.875 110.740 107.474 1.00 36.00 C
ATOM 16 N7 G B2016 45.778 111.505 108.025 1.00 37.01 N
ATOM 17 C5 G B2016 45.807 112.637 107.226 1.00 36.52 C
ATOM 18 C6 G B2016 46.597 113.807 107.322 1.00 37.99 C
ATOM 19 O6 G B2016 47.461 114.085 108.156 1.00 40.02 O
ATOM 20 N1 G B2016 46.301 114.709 106.304 1.00 36.94 N
ATOM 21 C2 G B2016 45.366 114.509 105.322 1.00 35.09 C
ATOM 22 N2 G B2016 45.214 115.493 104.440 1.00 34.26 N
ATOM 23 N3 G B2016 44.631 113.421 105.218 1.00 35.82 N
ATOM 24 C4 G B2016 44.901 112.532 106.195 1.00 36.79 C
ATOM 25 P C B2017 45.104 106.433 103.757 1.00 40.47 P
ATOM 26 OP1 C B2017 44.635 105.424 102.789 1.00 37.32 O
ATOM 27 OP2 C B2017 45.627 105.987 105.079 1.00 39.64 O
ATOM 28 O5' C B2017 46.201 107.367 103.065 1.00 41.27 O
TER
ATOM 2 OP1 A A 617 39.093 110.659 96.318 1.00 34.96 O
ATOM 3 OP2 A A 617 38.562 111.918 94.157 1.00 35.91 O
ATOM 4 O5' A A 617 38.900 113.155 96.321 1.00 33.06 O
ATOM 5 C5' A A 617 38.383 114.356 95.698 1.00 32.42 C
ATOM 6 C4' A A 617 38.991 115.596 96.338 1.00 32.93 C
ATOM 7 O4' A A 617 38.685 115.599 97.760 1.00 36.40 O
ATOM 8 C3' A A 617 40.510 115.731 96.281 1.00 35.04 C
ATOM 9 O3' A A 617 40.953 116.348 95.074 1.00 32.13 O
ATOM 10 C2' A A 617 40.805 116.637 97.472 1.00 35.35 C
ATOM 11 O2' A A 617 40.550 118.000 97.192 1.00 34.39 O
ATOM 12 C1' A A 617 39.781 116.140 98.492 1.00 37.03 C
ATOM 13 N9 A A 617 40.308 115.110 99.398 1.00 37.72 N
ATOM 14 C8 A A 617 39.905 113.801 99.502 1.00 39.41 C
ATOM 15 N7 A A 617 40.554 113.118 100.410 1.00 40.69 N
ATOM 16 C5 A A 617 41.446 114.035 100.945 1.00 40.12 C
ATOM 17 C6 A A 617 42.415 113.929 101.962 1.00 41.40 C
ATOM 18 N6 A A 617 42.631 112.816 102.669 1.00 41.06 N
ATOM 19 N1 A A 617 43.154 115.020 102.237 1.00 38.31 N
ATOM 20 C2 A A 617 42.913 116.142 101.553 1.00 39.22 C
ATOM 21 N3 A A 617 42.022 116.373 100.595 1.00 38.69 N
ATOM 22 C4 A A 617 41.312 115.264 100.329 1.00 38.64 C
ATOM 23 P A A 618 42.301 115.849 94.353 1.00 35.72 P
ATOM 24 OP1 A A 618 42.381 116.669 93.128 1.00 41.18 O
ATOM 25 OP2 A A 618 42.338 114.373 94.244 1.00 36.88 O
ATOM 26 O5' A A 618 43.520 116.182 95.325 1.00 37.44 O
TER
ATOM 1 O3' U B2015 42.248 107.634 109.892 1.00 36.01 O
ATOM 2 P G B2016 43.470 106.899 109.153 1.00 35.96 P
ATOM 3 OP1 G B2016 43.086 105.470 108.971 1.00 35.52 O
ATOM 4 OP2 G B2016 44.734 107.228 109.859 1.00 40.82 O
ATOM 5 O5' G B2016 43.513 107.586 107.710 1.00 38.97 O
ATOM 6 C5' G B2016 42.402 107.487 106.800 1.00 36.07 C
ATOM 7 C4' G B2016 42.555 108.487 105.672 1.00 37.31 C
ATOM 8 O4' G B2016 42.481 109.836 106.195 1.00 37.78 O
ATOM 9 C3' G B2016 43.884 108.441 104.942 1.00 36.96 C
ATOM 10 O3' G B2016 43.843 107.414 103.958 1.00 38.23 O
ATOM 11 C2' G B2016 43.984 109.845 104.350 1.00 35.99 C
ATOM 12 O2' G B2016 43.240 110.044 103.173 1.00 35.50 O
ATOM 13 C1' G B2016 43.335 110.688 105.448 1.00 36.90 C
ATOM 14 N9 G B2016 44.318 111.293 106.346 1.00 37.72 N
ATOM 15 C8 G B2016 44.875 110.740 107.474 1.00 36.00 C
ATOM 16 N7 G B2016 45.778 111.505 108.025 1.00 37.01 N
ATOM 17 C5 G B2016 45.807 112.637 107.226 1.00 36.52 C
ATOM 18 C6 G B2016 46.597 113.807 107.322 1.00 37.99 C
ATOM 19 O6 G B2016 47.461 114.085 108.156 1.00 40.02 O
ATOM 20 N1 G B2016 46.301 114.709 106.304 1.00 36.94 N
ATOM 21 C2 G B2016 45.366 114.509 105.322 1.00 35.09 C
ATOM 22 N2 G B2016 45.214 115.493 104.440 1.00 34.26 N
ATOM 23 N3 G B2016 44.631 113.421 105.218 1.00 35.82 N
ATOM 24 C4 G B2016 44.901 112.532 106.195 1.00 36.79 C
ATOM 25 P C B2017 45.104 106.433 103.757 1.00 40.47 P
ATOM 26 OP1 C B2017 44.635 105.424 102.789 1.00 37.32 O
ATOM 27 OP2 C B2017 45.627 105.987 105.079 1.00 39.64 O
ATOM 28 O5' C B2017 46.201 107.367 103.065 1.00 41.27 O
TER
Atoms:
OP1: (39.093,110.659,96.318)
OP2: (38.562,111.918,94.157)
C3': (40.510,115.731,96.281)
C1': (39.781,116.140,98.492)
C5': (38.383,114.356,95.698)
O4': (38.685,115.599,97.760)
C8: (39.905,113.801,99.502)
O2': (40.550,118.000,97.192)
C6: (42.415,113.929,101.962)
C5: (41.446,114.035,100.945)
C4: (41.312,115.264,100.329)
P: (39.261,111.855,95.466)
C4': (38.991,115.596,96.338)
C2': (40.805,116.637,97.472)
C2: (42.913,116.142,101.553)
N1: (43.154,115.020,102.237)
N3: (42.022,116.373,100.595)
N6: (42.631,112.816,102.669)
N7: (40.554,113.118,100.410)
N9: (40.308,115.110,99.398)
O5': (38.900,113.155,96.321)
O3': (40.953,116.348,95.074)
OP2: (38.562,111.918,94.157)
C3': (40.510,115.731,96.281)
C1': (39.781,116.140,98.492)
C5': (38.383,114.356,95.698)
O4': (38.685,115.599,97.760)
C8: (39.905,113.801,99.502)
O2': (40.550,118.000,97.192)
C6: (42.415,113.929,101.962)
C5: (41.446,114.035,100.945)
C4: (41.312,115.264,100.329)
P: (39.261,111.855,95.466)
C4': (38.991,115.596,96.338)
C2': (40.805,116.637,97.472)
C2: (42.913,116.142,101.553)
N1: (43.154,115.020,102.237)
N3: (42.022,116.373,100.595)
N6: (42.631,112.816,102.669)
N7: (40.554,113.118,100.410)
N9: (40.308,115.110,99.398)
O5': (38.900,113.155,96.321)
O3': (40.953,116.348,95.074)
OP1: (43.086,105.470,108.971)
OP2: (44.734,107.228,109.859)
C3': (43.884,108.441,104.942)
C1': (43.335,110.688,105.448)
C5': (42.402,107.487,106.800)
O6: (47.461,114.085,108.156)
O4': (42.481,109.836,106.195)
C8: (44.875,110.740,107.474)
C2: (45.366,114.509,105.322)
C6: (46.597,113.807,107.322)
C5: (45.807,112.637,107.226)
C4: (44.901,112.532,106.195)
P: (43.470,106.899,109.153)
C4': (42.555,108.487,105.672)
C2': (43.984,109.845,104.350)
O2': (43.240,110.044,103.173)
N1: (46.301,114.709,106.304)
N2: (45.214,115.493,104.440)
N3: (44.631,113.421,105.218)
N7: (45.778,111.505,108.025)
N9: (44.318,111.293,106.346)
O5': (43.513,107.586,107.710)
O3': (43.843,107.414,103.958)
OP2: (44.734,107.228,109.859)
C3': (43.884,108.441,104.942)
C1': (43.335,110.688,105.448)
C5': (42.402,107.487,106.800)
O6: (47.461,114.085,108.156)
O4': (42.481,109.836,106.195)
C8: (44.875,110.740,107.474)
C2: (45.366,114.509,105.322)
C6: (46.597,113.807,107.322)
C5: (45.807,112.637,107.226)
C4: (44.901,112.532,106.195)
P: (43.470,106.899,109.153)
C4': (42.555,108.487,105.672)
C2': (43.984,109.845,104.350)
O2': (43.240,110.044,103.173)
N1: (46.301,114.709,106.304)
N2: (45.214,115.493,104.440)
N3: (44.631,113.421,105.218)
N7: (45.778,111.505,108.025)
N9: (44.318,111.293,106.346)
O5': (43.513,107.586,107.710)
O3': (43.843,107.414,103.958)
Image (generated by PyMOL):