Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L2X:A5:A20
Extra
PDB:
ATOM 1 O3' C A 4 0.409 25.115 34.749 1.00 19.14 O
ATOM 2 P G A 5 0.999 24.797 36.211 1.00 20.64 P
ATOM 3 OP1 G A 5 -0.090 25.148 37.167 1.00 22.70 O
ATOM 4 OP2 G A 5 2.321 25.440 36.390 1.00 21.67 O
ATOM 5 O5' G A 5 1.221 23.224 36.230 1.00 18.26 O
ATOM 6 C5' G A 5 0.106 22.341 36.039 1.00 16.89 C
ATOM 7 C4' G A 5 0.604 20.956 35.742 1.00 16.28 C
ATOM 8 O4' G A 5 1.435 20.949 34.554 1.00 17.51 O
ATOM 9 C3' G A 5 1.521 20.345 36.794 1.00 17.59 C
ATOM 10 O3' G A 5 0.827 19.844 37.914 1.00 18.30 O
ATOM 11 C2' G A 5 2.178 19.225 36.015 1.00 15.71 C
ATOM 12 O2' G A 5 1.236 18.187 35.795 1.00 18.25 O
ATOM 13 C1' G A 5 2.429 19.930 34.702 1.00 14.82 C
ATOM 14 N9 G A 5 3.726 20.591 34.626 1.00 15.49 N
ATOM 15 C8 G A 5 4.019 21.926 34.686 1.00 15.03 C
ATOM 16 N7 G A 5 5.296 22.162 34.583 1.00 14.87 N
ATOM 17 C5 G A 5 5.880 20.917 34.426 1.00 14.32 C
ATOM 18 C6 G A 5 7.230 20.520 34.259 1.00 14.68 C
ATOM 19 O6 G A 5 8.211 21.270 34.210 1.00 14.78 O
ATOM 20 N1 G A 5 7.383 19.141 34.132 1.00 14.60 N
ATOM 21 C2 G A 5 6.338 18.244 34.189 1.00 13.55 C
ATOM 22 N2 G A 5 6.663 16.947 34.060 1.00 15.52 N
ATOM 23 N3 G A 5 5.073 18.592 34.339 1.00 14.46 N
ATOM 24 C4 G A 5 4.923 19.930 34.452 1.00 12.70 C
ATOM 25 P G A 6 1.590 19.628 39.306 1.00 20.29 P
ATOM 26 OP1 G A 6 0.595 19.133 40.297 1.00 23.90 O
ATOM 27 OP2 G A 6 2.425 20.820 39.632 1.00 20.45 O
ATOM 28 O5' G A 6 2.618 18.451 39.004 1.00 19.58 O
TER
ATOM 1 O3' A B 19 0.330 18.338 30.013 1.00 15.01 O
ATOM 2 P A B 20 0.570 17.851 31.514 1.00 15.65 P
ATOM 3 OP1 A B 20 -0.183 18.700 32.468 1.00 16.85 O
ATOM 4 OP2 A B 20 2.022 17.609 31.755 1.00 14.78 O
ATOM 5 O5' A B 20 -0.110 16.400 31.534 1.00 18.13 O
ATOM 6 C5' A B 20 -1.521 16.218 31.482 1.00 23.19 C
ATOM 7 C4' A B 20 -1.823 14.783 31.142 1.00 27.19 C
ATOM 8 O4' A B 20 -1.237 14.441 29.851 1.00 26.49 O
ATOM 9 C2' A B 20 -1.327 12.488 31.217 1.00 27.66 C
ATOM 10 O2' A B 20 -2.647 12.011 31.043 1.00 31.77 O
ATOM 11 C1' A B 20 -0.894 13.053 29.866 1.00 27.15 C
ATOM 12 N9 A B 20 0.542 12.937 29.609 1.00 25.30 N
ATOM 13 C8 A B 20 1.547 13.864 29.684 1.00 26.52 C
ATOM 14 N7 A B 20 2.730 13.390 29.371 1.00 26.75 N
ATOM 15 C5 A B 20 2.480 12.066 29.034 1.00 26.95 C
ATOM 16 C6 A B 20 3.309 11.020 28.604 1.00 25.88 C
ATOM 17 N6 A B 20 4.621 11.153 28.419 1.00 26.52 N
ATOM 18 N1 A B 20 2.739 9.821 28.355 1.00 27.24 N
ATOM 19 C2 A B 20 1.419 9.689 28.544 1.00 24.71 C
ATOM 20 N3 A B 20 0.530 10.592 28.951 1.00 27.33 N
ATOM 21 C4 A B 20 1.139 11.774 29.170 1.00 26.08 C
ATOM 22 C3' A B 20 -1.258 13.726 32.085 0.50 29.67 C
ATOM 23 O3' A B 20 -2.014 13.620 33.282 0.50 32.76 O
ATOM 24 P C B 21 -1.253 13.321 34.673 0.50 35.14 P
ATOM 25 OP1 C B 21 -2.186 13.531 35.815 0.50 42.46 O
ATOM 26 OP2 C B 21 0.058 14.024 34.691 0.50 37.97 O
ATOM 27 O5' C B 21 -0.961 11.754 34.563 0.50 32.70 O
TER
ATOM 2 P G A 5 0.999 24.797 36.211 1.00 20.64 P
ATOM 3 OP1 G A 5 -0.090 25.148 37.167 1.00 22.70 O
ATOM 4 OP2 G A 5 2.321 25.440 36.390 1.00 21.67 O
ATOM 5 O5' G A 5 1.221 23.224 36.230 1.00 18.26 O
ATOM 6 C5' G A 5 0.106 22.341 36.039 1.00 16.89 C
ATOM 7 C4' G A 5 0.604 20.956 35.742 1.00 16.28 C
ATOM 8 O4' G A 5 1.435 20.949 34.554 1.00 17.51 O
ATOM 9 C3' G A 5 1.521 20.345 36.794 1.00 17.59 C
ATOM 10 O3' G A 5 0.827 19.844 37.914 1.00 18.30 O
ATOM 11 C2' G A 5 2.178 19.225 36.015 1.00 15.71 C
ATOM 12 O2' G A 5 1.236 18.187 35.795 1.00 18.25 O
ATOM 13 C1' G A 5 2.429 19.930 34.702 1.00 14.82 C
ATOM 14 N9 G A 5 3.726 20.591 34.626 1.00 15.49 N
ATOM 15 C8 G A 5 4.019 21.926 34.686 1.00 15.03 C
ATOM 16 N7 G A 5 5.296 22.162 34.583 1.00 14.87 N
ATOM 17 C5 G A 5 5.880 20.917 34.426 1.00 14.32 C
ATOM 18 C6 G A 5 7.230 20.520 34.259 1.00 14.68 C
ATOM 19 O6 G A 5 8.211 21.270 34.210 1.00 14.78 O
ATOM 20 N1 G A 5 7.383 19.141 34.132 1.00 14.60 N
ATOM 21 C2 G A 5 6.338 18.244 34.189 1.00 13.55 C
ATOM 22 N2 G A 5 6.663 16.947 34.060 1.00 15.52 N
ATOM 23 N3 G A 5 5.073 18.592 34.339 1.00 14.46 N
ATOM 24 C4 G A 5 4.923 19.930 34.452 1.00 12.70 C
ATOM 25 P G A 6 1.590 19.628 39.306 1.00 20.29 P
ATOM 26 OP1 G A 6 0.595 19.133 40.297 1.00 23.90 O
ATOM 27 OP2 G A 6 2.425 20.820 39.632 1.00 20.45 O
ATOM 28 O5' G A 6 2.618 18.451 39.004 1.00 19.58 O
TER
ATOM 1 O3' A B 19 0.330 18.338 30.013 1.00 15.01 O
ATOM 2 P A B 20 0.570 17.851 31.514 1.00 15.65 P
ATOM 3 OP1 A B 20 -0.183 18.700 32.468 1.00 16.85 O
ATOM 4 OP2 A B 20 2.022 17.609 31.755 1.00 14.78 O
ATOM 5 O5' A B 20 -0.110 16.400 31.534 1.00 18.13 O
ATOM 6 C5' A B 20 -1.521 16.218 31.482 1.00 23.19 C
ATOM 7 C4' A B 20 -1.823 14.783 31.142 1.00 27.19 C
ATOM 8 O4' A B 20 -1.237 14.441 29.851 1.00 26.49 O
ATOM 9 C2' A B 20 -1.327 12.488 31.217 1.00 27.66 C
ATOM 10 O2' A B 20 -2.647 12.011 31.043 1.00 31.77 O
ATOM 11 C1' A B 20 -0.894 13.053 29.866 1.00 27.15 C
ATOM 12 N9 A B 20 0.542 12.937 29.609 1.00 25.30 N
ATOM 13 C8 A B 20 1.547 13.864 29.684 1.00 26.52 C
ATOM 14 N7 A B 20 2.730 13.390 29.371 1.00 26.75 N
ATOM 15 C5 A B 20 2.480 12.066 29.034 1.00 26.95 C
ATOM 16 C6 A B 20 3.309 11.020 28.604 1.00 25.88 C
ATOM 17 N6 A B 20 4.621 11.153 28.419 1.00 26.52 N
ATOM 18 N1 A B 20 2.739 9.821 28.355 1.00 27.24 N
ATOM 19 C2 A B 20 1.419 9.689 28.544 1.00 24.71 C
ATOM 20 N3 A B 20 0.530 10.592 28.951 1.00 27.33 N
ATOM 21 C4 A B 20 1.139 11.774 29.170 1.00 26.08 C
ATOM 22 C3' A B 20 -1.258 13.726 32.085 0.50 29.67 C
ATOM 23 O3' A B 20 -2.014 13.620 33.282 0.50 32.76 O
ATOM 24 P C B 21 -1.253 13.321 34.673 0.50 35.14 P
ATOM 25 OP1 C B 21 -2.186 13.531 35.815 0.50 42.46 O
ATOM 26 OP2 C B 21 0.058 14.024 34.691 0.50 37.97 O
ATOM 27 O5' C B 21 -0.961 11.754 34.563 0.50 32.70 O
TER
Atoms:
OP1: (-0.090,25.148,37.167)
OP2: (2.321,25.440,36.390)
C3': (1.521,20.345,36.794)
C1': (2.429,19.930,34.702)
C5': (0.106,22.341,36.039)
O6: (8.211,21.270,34.210)
O4': (1.435,20.949,34.554)
C8: (4.019,21.926,34.686)
C2: (6.338,18.244,34.189)
C6: (7.230,20.520,34.259)
C5: (5.880,20.917,34.426)
C4: (4.923,19.930,34.452)
P: (0.999,24.797,36.211)
C4': (0.604,20.956,35.742)
C2': (2.178,19.225,36.015)
O2': (1.236,18.187,35.795)
N1: (7.383,19.141,34.132)
N2: (6.663,16.947,34.060)
N3: (5.073,18.592,34.339)
N7: (5.296,22.162,34.583)
N9: (3.726,20.591,34.626)
O5': (1.221,23.224,36.230)
O3': (0.827,19.844,37.914)
OP2: (2.321,25.440,36.390)
C3': (1.521,20.345,36.794)
C1': (2.429,19.930,34.702)
C5': (0.106,22.341,36.039)
O6: (8.211,21.270,34.210)
O4': (1.435,20.949,34.554)
C8: (4.019,21.926,34.686)
C2: (6.338,18.244,34.189)
C6: (7.230,20.520,34.259)
C5: (5.880,20.917,34.426)
C4: (4.923,19.930,34.452)
P: (0.999,24.797,36.211)
C4': (0.604,20.956,35.742)
C2': (2.178,19.225,36.015)
O2': (1.236,18.187,35.795)
N1: (7.383,19.141,34.132)
N2: (6.663,16.947,34.060)
N3: (5.073,18.592,34.339)
N7: (5.296,22.162,34.583)
N9: (3.726,20.591,34.626)
O5': (1.221,23.224,36.230)
O3': (0.827,19.844,37.914)
OP1: (-0.183,18.700,32.468)
OP2: (2.022,17.609,31.755)
C3': (-1.258,13.726,32.085)
C1': (-0.894,13.053,29.866)
C5': (-1.521,16.218,31.482)
O4': (-1.237,14.441,29.851)
C8: (1.547,13.864,29.684)
O2': (-2.647,12.011,31.043)
C6: (3.309,11.020,28.604)
C5: (2.480,12.066,29.034)
C4: (1.139,11.774,29.170)
P: (0.570,17.851,31.514)
C4': (-1.823,14.783,31.142)
C2': (-1.327,12.488,31.217)
C2: (1.419,9.689,28.544)
N1: (2.739,9.821,28.355)
N3: (0.530,10.592,28.951)
N6: (4.621,11.153,28.419)
N7: (2.730,13.390,29.371)
N9: (0.542,12.937,29.609)
O5': (-0.110,16.400,31.534)
O3': (-2.014,13.620,33.282)
OP2: (2.022,17.609,31.755)
C3': (-1.258,13.726,32.085)
C1': (-0.894,13.053,29.866)
C5': (-1.521,16.218,31.482)
O4': (-1.237,14.441,29.851)
C8: (1.547,13.864,29.684)
O2': (-2.647,12.011,31.043)
C6: (3.309,11.020,28.604)
C5: (2.480,12.066,29.034)
C4: (1.139,11.774,29.170)
P: (0.570,17.851,31.514)
C4': (-1.823,14.783,31.142)
C2': (-1.327,12.488,31.217)
C2: (1.419,9.689,28.544)
N1: (2.739,9.821,28.355)
N3: (0.530,10.592,28.951)
N6: (4.621,11.153,28.419)
N7: (2.730,13.390,29.371)
N9: (0.542,12.937,29.609)
O5': (-0.110,16.400,31.534)
O3': (-2.014,13.620,33.282)
Image (generated by PyMOL):