ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0182:0403

Extra

PDB:
ATOM 1 O3' A A 181 77.594 94.950 19.802 1.00 44.87 O
ATOM 2 P A A 182 77.159 93.840 20.886 1.00 44.75 P
ATOM 3 OP1 A A 182 78.080 93.952 22.049 1.00 43.14 O
ATOM 4 OP2 A A 182 77.028 92.536 20.187 1.00 44.73 O
ATOM 5 O5' A A 182 75.698 94.306 21.314 1.00 40.95 O
ATOM 6 C5' A A 182 75.495 95.568 21.977 1.00 39.46 C
ATOM 7 C4' A A 182 74.024 95.808 22.214 1.00 38.13 C
ATOM 8 O4' A A 182 73.353 96.061 20.956 1.00 39.15 O
ATOM 9 C3' A A 182 73.255 94.647 22.821 1.00 37.89 C
ATOM 10 O3' A A 182 73.430 94.609 24.227 1.00 40.43 O
ATOM 11 C2' A A 182 71.828 94.976 22.412 1.00 37.36 C
ATOM 12 O2' A A 182 71.271 96.008 23.198 1.00 35.30 O
ATOM 13 C1' A A 182 72.047 95.498 20.989 1.00 39.25 C
ATOM 14 N9 A A 182 72.004 94.418 20.004 1.00 40.12 N
ATOM 15 C8 A A 182 73.065 93.866 19.327 1.00 38.96 C
ATOM 16 N7 A A 182 72.732 92.871 18.546 1.00 41.44 N
ATOM 17 C5 A A 182 71.357 92.766 18.707 1.00 40.60 C
ATOM 18 C6 A A 182 70.405 91.891 18.156 1.00 40.65 C
ATOM 19 N6 A A 182 70.711 90.906 17.302 1.00 39.43 N
ATOM 20 N1 A A 182 69.114 92.059 18.520 1.00 40.59 N
ATOM 21 C2 A A 182 68.814 93.034 19.385 1.00 38.57 C
ATOM 22 N3 A A 182 69.621 93.912 19.977 1.00 39.62 N
ATOM 23 C4 A A 182 70.893 93.722 19.591 1.00 39.55 C
ATOM 24 P C A 183 73.576 93.200 24.980 1.00 39.08 P
ATOM 25 OP1 C A 183 73.825 93.604 26.383 1.00 39.70 O
ATOM 26 OP2 C A 183 74.556 92.330 24.294 1.00 37.71 O
ATOM 27 O5' C A 183 72.128 92.543 24.820 1.00 39.54 O
TER

ATOM 1 O3' C B 402 84.673 91.967 23.904 1.00 44.34 O
ATOM 2 P A B 403 84.145 90.746 24.806 1.00 43.23 P
ATOM 3 OP1 A B 403 84.357 91.139 26.218 1.00 44.09 O
ATOM 4 OP2 A B 403 84.751 89.496 24.301 1.00 43.67 O
ATOM 5 O5' A B 403 82.579 90.700 24.523 1.00 39.89 O
ATOM 6 C5' A B 403 81.710 91.750 24.980 1.00 39.48 C
ATOM 7 C4' A B 403 80.287 91.459 24.570 1.00 41.28 C
ATOM 8 O4' A B 403 80.257 91.249 23.137 1.00 43.20 O
ATOM 9 C3' A B 403 79.684 90.187 25.146 1.00 42.26 C
ATOM 10 O3' A B 403 79.105 90.440 26.419 1.00 43.55 O
ATOM 11 C2' A B 403 78.619 89.830 24.121 1.00 43.34 C
ATOM 12 O2' A B 403 77.426 90.572 24.287 1.00 42.99 O
ATOM 13 C1' A B 403 79.306 90.247 22.819 1.00 43.19 C
ATOM 14 N9 A B 403 80.000 89.155 22.136 1.00 43.10 N
ATOM 15 C8 A B 403 81.354 88.915 22.067 1.00 43.14 C
ATOM 16 N7 A B 403 81.669 87.871 21.341 1.00 41.94 N
ATOM 17 C5 A B 403 80.442 87.388 20.904 1.00 42.41 C
ATOM 18 C6 A B 403 80.092 86.304 20.085 1.00 43.16 C
ATOM 19 N6 A B 403 80.986 85.481 19.524 1.00 41.95 N
ATOM 20 N1 A B 403 78.778 86.091 19.856 1.00 42.71 N
ATOM 21 C2 A B 403 77.886 86.915 20.415 1.00 41.95 C
ATOM 22 N3 A B 403 78.091 87.970 21.195 1.00 42.31 N
ATOM 23 C4 A B 403 79.406 88.158 21.401 1.00 42.40 C
ATOM 24 P G B 404 78.917 89.240 27.468 1.00 44.42 P
ATOM 25 OP1 G B 404 78.372 89.857 28.712 1.00 43.28 O
ATOM 26 OP2 G B 404 80.190 88.461 27.521 1.00 41.53 O
ATOM 27 O5' G B 404 77.777 88.333 26.826 1.00 41.71 O
TER

Atoms:
OP1: (78.080,93.952,22.049)
OP2: (77.028,92.536,20.187)
C3': (73.255,94.647,22.821)
C1': (72.047,95.498,20.989)
C5': (75.495,95.568,21.977)
O4': (73.353,96.061,20.956)
C8: (73.065,93.866,19.327)
O2': (71.271,96.008,23.198)
C6: (70.405,91.891,18.156)
C5: (71.357,92.766,18.707)
C4: (70.893,93.722,19.591)
P: (77.159,93.840,20.886)
C4': (74.024,95.808,22.214)
C2': (71.828,94.976,22.412)
C2: (68.814,93.034,19.385)
N1: (69.114,92.059,18.520)
N3: (69.621,93.912,19.977)
N6: (70.711,90.906,17.302)
N7: (72.732,92.871,18.546)
N9: (72.004,94.418,20.004)
O5': (75.698,94.306,21.314)
O3': (73.430,94.609,24.227)
OP1: (84.357,91.139,26.218)
OP2: (84.751,89.496,24.301)
C3': (79.684,90.187,25.146)
C1': (79.306,90.247,22.819)
C5': (81.710,91.750,24.980)
O4': (80.257,91.249,23.137)
C8: (81.354,88.915,22.067)
O2': (77.426,90.572,24.287)
C6: (80.092,86.304,20.085)
C5: (80.442,87.388,20.904)
C4: (79.406,88.158,21.401)
P: (84.145,90.746,24.806)
C4': (80.287,91.459,24.570)
C2': (78.619,89.830,24.121)
C2: (77.886,86.915,20.415)
N1: (78.778,86.091,19.856)
N3: (78.091,87.970,21.195)
N6: (80.986,85.481,19.524)
N7: (81.669,87.871,21.341)
N9: (80.000,89.155,22.136)
O5': (82.579,90.700,24.523)
O3': (79.105,90.440,26.419)
Image (generated by PyMOL):
PyMOL image
show in jmol