Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C51:C23
Extra
PDB:
ATOM 1 O3' A A 50 13.330 -18.842 -82.621 1.00 73.05 O
ATOM 2 P A A 51 14.815 -19.211 -82.128 1.00 76.82 P
ATOM 3 OP1 A A 51 15.747 -18.289 -82.821 1.00 62.55 O
ATOM 4 OP2 A A 51 14.988 -20.673 -82.313 1.00 75.90 O
ATOM 5 O5' A A 51 14.767 -18.863 -80.574 1.00 74.65 O
ATOM 6 C5' A A 51 14.115 -19.724 -79.652 1.00 68.91 C
ATOM 7 C4' A A 51 13.378 -18.944 -78.593 1.00 63.37 C
ATOM 8 O4' A A 51 11.986 -18.776 -78.982 1.00 61.89 O
ATOM 9 C3' A A 51 13.290 -19.599 -77.225 1.00 56.87 C
ATOM 10 O3' A A 51 14.469 -19.457 -76.455 1.00 63.17 O
ATOM 11 C2' A A 51 12.075 -18.915 -76.621 1.00 57.22 C
ATOM 12 O2' A A 51 12.390 -17.587 -76.230 1.00 60.01 O
ATOM 13 C1' A A 51 11.158 -18.853 -77.837 1.00 59.97 C
ATOM 14 N9 A A 51 10.325 -20.065 -77.946 1.00 62.53 N
ATOM 15 C8 A A 51 10.531 -21.146 -78.766 1.00 60.51 C
ATOM 16 N7 A A 51 9.628 -22.087 -78.634 1.00 61.87 N
ATOM 17 C5 A A 51 8.774 -21.596 -77.656 1.00 56.37 C
ATOM 18 C6 A A 51 7.615 -22.126 -77.066 1.00 53.93 C
ATOM 19 N6 A A 51 7.098 -23.313 -77.389 1.00 56.79 N
ATOM 20 N1 A A 51 6.998 -21.384 -76.121 1.00 56.01 N
ATOM 21 C2 A A 51 7.520 -20.194 -75.799 1.00 55.46 C
ATOM 22 N3 A A 51 8.603 -19.591 -76.282 1.00 58.51 N
ATOM 23 C4 A A 51 9.192 -20.352 -77.221 1.00 58.12 C
ATOM 24 P U A 52 14.977 -20.675 -75.539 1.00 70.44 P
ATOM 25 OP1 U A 52 15.953 -20.117 -74.570 1.00 63.73 O
ATOM 26 OP2 U A 52 15.419 -21.755 -76.455 1.00 58.58 O
ATOM 27 O5' U A 52 13.651 -21.121 -74.778 1.00 57.85 O
TER
ATOM 1 O3' A B 22 6.881 -31.884 -76.016 1.00 60.05 O
ATOM 2 P G B 23 7.627 -31.769 -74.599 1.00 60.08 P
ATOM 3 OP1 G B 23 8.748 -32.740 -74.615 1.00 58.22 O
ATOM 4 OP2 G B 23 6.588 -31.895 -73.548 1.00 61.93 O
ATOM 5 O5' G B 23 8.198 -30.282 -74.620 1.00 67.56 O
ATOM 6 C5' G B 23 9.164 -29.882 -75.582 1.00 68.19 C
ATOM 7 C4' G B 23 9.492 -28.415 -75.457 1.00 63.92 C
ATOM 8 O4' G B 23 8.368 -27.620 -75.922 1.00 61.65 O
ATOM 9 C3' G B 23 9.746 -27.906 -74.046 1.00 64.05 C
ATOM 10 O3' G B 23 11.062 -28.166 -73.589 1.00 69.33 O
ATOM 11 C2' G B 23 9.418 -26.426 -74.166 1.00 59.58 C
ATOM 12 O2' G B 23 10.476 -25.727 -74.807 1.00 60.63 O
ATOM 13 C1' G B 23 8.225 -26.469 -75.117 1.00 55.06 C
ATOM 14 N9 G B 23 6.949 -26.573 -74.386 1.00 54.06 N
ATOM 15 C8 G B 23 6.397 -27.723 -73.880 1.00 57.14 C
ATOM 16 N7 G B 23 5.260 -27.522 -73.276 1.00 56.67 N
ATOM 17 C5 G B 23 5.049 -26.156 -73.389 1.00 54.56 C
ATOM 18 C6 G B 23 3.979 -25.353 -72.922 1.00 56.36 C
ATOM 19 O6 G B 23 2.971 -25.704 -72.297 1.00 60.01 O
ATOM 20 N1 G B 23 4.159 -24.014 -73.252 1.00 55.12 N
ATOM 21 C2 G B 23 5.232 -23.507 -73.940 1.00 55.44 C
ATOM 22 N2 G B 23 5.224 -22.184 -74.159 1.00 51.01 N
ATOM 23 N3 G B 23 6.238 -24.246 -74.380 1.00 59.08 N
ATOM 24 C4 G B 23 6.083 -25.553 -74.072 1.00 58.46 C
ATOM 25 P C B 24 11.304 -28.704 -72.093 1.00 65.43 P
ATOM 26 OP1 C B 24 10.017 -29.275 -71.622 1.00 61.46 O
ATOM 27 OP2 C B 24 11.915 -27.594 -71.323 1.00 73.29 O
ATOM 28 O5' C B 24 12.369 -29.868 -72.302 1.00 62.63 O
TER
ATOM 2 P A A 51 14.815 -19.211 -82.128 1.00 76.82 P
ATOM 3 OP1 A A 51 15.747 -18.289 -82.821 1.00 62.55 O
ATOM 4 OP2 A A 51 14.988 -20.673 -82.313 1.00 75.90 O
ATOM 5 O5' A A 51 14.767 -18.863 -80.574 1.00 74.65 O
ATOM 6 C5' A A 51 14.115 -19.724 -79.652 1.00 68.91 C
ATOM 7 C4' A A 51 13.378 -18.944 -78.593 1.00 63.37 C
ATOM 8 O4' A A 51 11.986 -18.776 -78.982 1.00 61.89 O
ATOM 9 C3' A A 51 13.290 -19.599 -77.225 1.00 56.87 C
ATOM 10 O3' A A 51 14.469 -19.457 -76.455 1.00 63.17 O
ATOM 11 C2' A A 51 12.075 -18.915 -76.621 1.00 57.22 C
ATOM 12 O2' A A 51 12.390 -17.587 -76.230 1.00 60.01 O
ATOM 13 C1' A A 51 11.158 -18.853 -77.837 1.00 59.97 C
ATOM 14 N9 A A 51 10.325 -20.065 -77.946 1.00 62.53 N
ATOM 15 C8 A A 51 10.531 -21.146 -78.766 1.00 60.51 C
ATOM 16 N7 A A 51 9.628 -22.087 -78.634 1.00 61.87 N
ATOM 17 C5 A A 51 8.774 -21.596 -77.656 1.00 56.37 C
ATOM 18 C6 A A 51 7.615 -22.126 -77.066 1.00 53.93 C
ATOM 19 N6 A A 51 7.098 -23.313 -77.389 1.00 56.79 N
ATOM 20 N1 A A 51 6.998 -21.384 -76.121 1.00 56.01 N
ATOM 21 C2 A A 51 7.520 -20.194 -75.799 1.00 55.46 C
ATOM 22 N3 A A 51 8.603 -19.591 -76.282 1.00 58.51 N
ATOM 23 C4 A A 51 9.192 -20.352 -77.221 1.00 58.12 C
ATOM 24 P U A 52 14.977 -20.675 -75.539 1.00 70.44 P
ATOM 25 OP1 U A 52 15.953 -20.117 -74.570 1.00 63.73 O
ATOM 26 OP2 U A 52 15.419 -21.755 -76.455 1.00 58.58 O
ATOM 27 O5' U A 52 13.651 -21.121 -74.778 1.00 57.85 O
TER
ATOM 1 O3' A B 22 6.881 -31.884 -76.016 1.00 60.05 O
ATOM 2 P G B 23 7.627 -31.769 -74.599 1.00 60.08 P
ATOM 3 OP1 G B 23 8.748 -32.740 -74.615 1.00 58.22 O
ATOM 4 OP2 G B 23 6.588 -31.895 -73.548 1.00 61.93 O
ATOM 5 O5' G B 23 8.198 -30.282 -74.620 1.00 67.56 O
ATOM 6 C5' G B 23 9.164 -29.882 -75.582 1.00 68.19 C
ATOM 7 C4' G B 23 9.492 -28.415 -75.457 1.00 63.92 C
ATOM 8 O4' G B 23 8.368 -27.620 -75.922 1.00 61.65 O
ATOM 9 C3' G B 23 9.746 -27.906 -74.046 1.00 64.05 C
ATOM 10 O3' G B 23 11.062 -28.166 -73.589 1.00 69.33 O
ATOM 11 C2' G B 23 9.418 -26.426 -74.166 1.00 59.58 C
ATOM 12 O2' G B 23 10.476 -25.727 -74.807 1.00 60.63 O
ATOM 13 C1' G B 23 8.225 -26.469 -75.117 1.00 55.06 C
ATOM 14 N9 G B 23 6.949 -26.573 -74.386 1.00 54.06 N
ATOM 15 C8 G B 23 6.397 -27.723 -73.880 1.00 57.14 C
ATOM 16 N7 G B 23 5.260 -27.522 -73.276 1.00 56.67 N
ATOM 17 C5 G B 23 5.049 -26.156 -73.389 1.00 54.56 C
ATOM 18 C6 G B 23 3.979 -25.353 -72.922 1.00 56.36 C
ATOM 19 O6 G B 23 2.971 -25.704 -72.297 1.00 60.01 O
ATOM 20 N1 G B 23 4.159 -24.014 -73.252 1.00 55.12 N
ATOM 21 C2 G B 23 5.232 -23.507 -73.940 1.00 55.44 C
ATOM 22 N2 G B 23 5.224 -22.184 -74.159 1.00 51.01 N
ATOM 23 N3 G B 23 6.238 -24.246 -74.380 1.00 59.08 N
ATOM 24 C4 G B 23 6.083 -25.553 -74.072 1.00 58.46 C
ATOM 25 P C B 24 11.304 -28.704 -72.093 1.00 65.43 P
ATOM 26 OP1 C B 24 10.017 -29.275 -71.622 1.00 61.46 O
ATOM 27 OP2 C B 24 11.915 -27.594 -71.323 1.00 73.29 O
ATOM 28 O5' C B 24 12.369 -29.868 -72.302 1.00 62.63 O
TER
Atoms:
OP1: (15.747,-18.289,-82.821)
OP2: (14.988,-20.673,-82.313)
C3': (13.290,-19.599,-77.225)
C1': (11.158,-18.853,-77.837)
C5': (14.115,-19.724,-79.652)
O4': (11.986,-18.776,-78.982)
C8: (10.531,-21.146,-78.766)
O2': (12.390,-17.587,-76.230)
C6: (7.615,-22.126,-77.066)
C5: (8.774,-21.596,-77.656)
C4: (9.192,-20.352,-77.221)
P: (14.815,-19.211,-82.128)
C4': (13.378,-18.944,-78.593)
C2': (12.075,-18.915,-76.621)
C2: (7.520,-20.194,-75.799)
N1: (6.998,-21.384,-76.121)
N3: (8.603,-19.591,-76.282)
N6: (7.098,-23.313,-77.389)
N7: (9.628,-22.087,-78.634)
N9: (10.325,-20.065,-77.946)
O5': (14.767,-18.863,-80.574)
O3': (14.469,-19.457,-76.455)
OP2: (14.988,-20.673,-82.313)
C3': (13.290,-19.599,-77.225)
C1': (11.158,-18.853,-77.837)
C5': (14.115,-19.724,-79.652)
O4': (11.986,-18.776,-78.982)
C8: (10.531,-21.146,-78.766)
O2': (12.390,-17.587,-76.230)
C6: (7.615,-22.126,-77.066)
C5: (8.774,-21.596,-77.656)
C4: (9.192,-20.352,-77.221)
P: (14.815,-19.211,-82.128)
C4': (13.378,-18.944,-78.593)
C2': (12.075,-18.915,-76.621)
C2: (7.520,-20.194,-75.799)
N1: (6.998,-21.384,-76.121)
N3: (8.603,-19.591,-76.282)
N6: (7.098,-23.313,-77.389)
N7: (9.628,-22.087,-78.634)
N9: (10.325,-20.065,-77.946)
O5': (14.767,-18.863,-80.574)
O3': (14.469,-19.457,-76.455)
OP1: (8.748,-32.740,-74.615)
OP2: (6.588,-31.895,-73.548)
C3': (9.746,-27.906,-74.046)
C1': (8.225,-26.469,-75.117)
C5': (9.164,-29.882,-75.582)
O6: (2.971,-25.704,-72.297)
O4': (8.368,-27.620,-75.922)
C8: (6.397,-27.723,-73.880)
C2: (5.232,-23.507,-73.940)
C6: (3.979,-25.353,-72.922)
C5: (5.049,-26.156,-73.389)
C4: (6.083,-25.553,-74.072)
P: (7.627,-31.769,-74.599)
C4': (9.492,-28.415,-75.457)
C2': (9.418,-26.426,-74.166)
O2': (10.476,-25.727,-74.807)
N1: (4.159,-24.014,-73.252)
N2: (5.224,-22.184,-74.159)
N3: (6.238,-24.246,-74.380)
N7: (5.260,-27.522,-73.276)
N9: (6.949,-26.573,-74.386)
O5': (8.198,-30.282,-74.620)
O3': (11.062,-28.166,-73.589)
OP2: (6.588,-31.895,-73.548)
C3': (9.746,-27.906,-74.046)
C1': (8.225,-26.469,-75.117)
C5': (9.164,-29.882,-75.582)
O6: (2.971,-25.704,-72.297)
O4': (8.368,-27.620,-75.922)
C8: (6.397,-27.723,-73.880)
C2: (5.232,-23.507,-73.940)
C6: (3.979,-25.353,-72.922)
C5: (5.049,-26.156,-73.389)
C4: (6.083,-25.553,-74.072)
P: (7.627,-31.769,-74.599)
C4': (9.492,-28.415,-75.457)
C2': (9.418,-26.426,-74.166)
O2': (10.476,-25.727,-74.807)
N1: (4.159,-24.014,-73.252)
N2: (5.224,-22.184,-74.159)
N3: (6.238,-24.246,-74.380)
N7: (5.260,-27.522,-73.276)
N9: (6.949,-26.573,-74.386)
O5': (8.198,-30.282,-74.620)
O3': (11.062,-28.166,-73.589)
Image (generated by PyMOL):