ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0182:0403

Extra

PDB:
ATOM 1 O3' A A 181 77.546 94.655 19.775 1.00 37.41 O
ATOM 2 P A A 182 77.054 93.611 20.895 1.00 38.70 P
ATOM 3 OP1 A A 182 77.907 93.725 22.108 1.00 36.71 O
ATOM 4 OP2 A A 182 76.913 92.292 20.228 1.00 38.50 O
ATOM 5 O5' A A 182 75.590 94.138 21.245 1.00 34.93 O
ATOM 6 C5' A A 182 75.406 95.391 21.924 1.00 32.29 C
ATOM 7 C4' A A 182 73.942 95.649 22.176 1.00 31.26 C
ATOM 8 O4' A A 182 73.264 95.892 20.921 1.00 29.57 O
ATOM 9 C3' A A 182 73.162 94.505 22.796 1.00 31.25 C
ATOM 10 O3' A A 182 73.352 94.419 24.196 1.00 33.76 O
ATOM 11 C2' A A 182 71.736 94.846 22.400 1.00 29.96 C
ATOM 12 O2' A A 182 71.177 95.875 23.195 1.00 26.97 O
ATOM 13 C1' A A 182 71.955 95.346 20.970 1.00 29.73 C
ATOM 14 N9 A A 182 71.906 94.250 20.006 1.00 29.64 N
ATOM 15 C8 A A 182 72.969 93.678 19.353 1.00 29.48 C
ATOM 16 N7 A A 182 72.634 92.693 18.562 1.00 30.76 N
ATOM 17 C5 A A 182 71.256 92.611 18.695 1.00 31.16 C
ATOM 18 C6 A A 182 70.298 91.757 18.115 1.00 31.83 C
ATOM 19 N6 A A 182 70.597 90.785 17.248 1.00 30.81 N
ATOM 20 N1 A A 182 69.005 91.937 18.465 1.00 32.40 N
ATOM 21 C2 A A 182 68.709 92.906 19.339 1.00 31.49 C
ATOM 22 N3 A A 182 69.520 93.769 19.951 1.00 30.81 N
ATOM 23 C4 A A 182 70.794 93.567 19.580 1.00 30.27 C
ATOM 24 P C A 183 73.543 92.980 24.870 1.00 35.43 P
ATOM 25 OP1 C A 183 73.920 93.209 26.288 1.00 33.60 O
ATOM 26 OP2 C A 183 74.432 92.177 24.002 1.00 34.62 O
ATOM 27 O5' C A 183 72.086 92.339 24.768 1.00 37.11 O
TER

ATOM 1 O3' C B 402 84.575 91.789 23.883 1.00 39.01 O
ATOM 2 P A B 403 84.074 90.557 24.774 1.00 38.71 P
ATOM 3 OP1 A B 403 84.325 90.943 26.190 1.00 38.66 O
ATOM 4 OP2 A B 403 84.682 89.314 24.234 1.00 39.08 O
ATOM 5 O5' A B 403 82.508 90.507 24.499 1.00 32.98 O
ATOM 6 C5' A B 403 81.661 91.583 24.910 1.00 31.06 C
ATOM 7 C4' A B 403 80.246 91.308 24.494 1.00 32.22 C
ATOM 8 O4' A B 403 80.239 91.092 23.068 1.00 34.57 O
ATOM 9 C3' A B 403 79.627 90.042 25.060 1.00 32.97 C
ATOM 10 O3' A B 403 79.061 90.284 26.336 1.00 34.58 O
ATOM 11 C2' A B 403 78.559 89.715 24.032 1.00 33.46 C
ATOM 12 O2' A B 403 77.403 90.511 24.185 1.00 32.18 O
ATOM 13 C1' A B 403 79.266 90.117 22.739 1.00 35.13 C
ATOM 14 N9 A B 403 79.931 89.019 22.037 1.00 35.58 N
ATOM 15 C8 A B 403 81.278 88.769 21.936 1.00 36.00 C
ATOM 16 N7 A B 403 81.566 87.727 21.196 1.00 36.44 N
ATOM 17 C5 A B 403 80.327 87.254 20.789 1.00 35.73 C
ATOM 18 C6 A B 403 79.951 86.179 19.980 1.00 36.46 C
ATOM 19 N6 A B 403 80.824 85.357 19.392 1.00 38.70 N
ATOM 20 N1 A B 403 78.632 85.972 19.783 1.00 36.34 N
ATOM 21 C2 A B 403 77.761 86.801 20.362 1.00 34.87 C
ATOM 22 N3 A B 403 77.990 87.852 21.133 1.00 35.07 N
ATOM 23 C4 A B 403 79.311 88.029 21.311 1.00 35.28 C
ATOM 24 P G B 404 78.875 89.074 27.372 1.00 35.13 P
ATOM 25 OP1 G B 404 78.344 89.699 28.617 1.00 35.39 O
ATOM 26 OP2 G B 404 80.117 88.261 27.426 1.00 33.02 O
ATOM 27 O5' G B 404 77.729 88.187 26.717 1.00 36.45 O
TER

Atoms:
OP1: (77.907,93.725,22.108)
OP2: (76.913,92.292,20.228)
C3': (73.162,94.505,22.796)
C1': (71.955,95.346,20.970)
C5': (75.406,95.391,21.924)
O4': (73.264,95.892,20.921)
C8: (72.969,93.678,19.353)
O2': (71.177,95.875,23.195)
C6: (70.298,91.757,18.115)
C5: (71.256,92.611,18.695)
C4: (70.794,93.567,19.580)
P: (77.054,93.611,20.895)
C4': (73.942,95.649,22.176)
C2': (71.736,94.846,22.400)
C2: (68.709,92.906,19.339)
N1: (69.005,91.937,18.465)
N3: (69.520,93.769,19.951)
N6: (70.597,90.785,17.248)
N7: (72.634,92.693,18.562)
N9: (71.906,94.250,20.006)
O5': (75.590,94.138,21.245)
O3': (73.352,94.419,24.196)
OP1: (84.325,90.943,26.190)
OP2: (84.682,89.314,24.234)
C3': (79.627,90.042,25.060)
C1': (79.266,90.117,22.739)
C5': (81.661,91.583,24.910)
O4': (80.239,91.092,23.068)
C8: (81.278,88.769,21.936)
O2': (77.403,90.511,24.185)
C6: (79.951,86.179,19.980)
C5: (80.327,87.254,20.789)
C4: (79.311,88.029,21.311)
P: (84.074,90.557,24.774)
C4': (80.246,91.308,24.494)
C2': (78.559,89.715,24.032)
C2: (77.761,86.801,20.362)
N1: (78.632,85.972,19.783)
N3: (77.990,87.852,21.133)
N6: (80.824,85.357,19.392)
N7: (81.566,87.727,21.196)
N9: (79.931,89.019,22.037)
O5': (82.508,90.507,24.499)
O3': (79.061,90.284,26.336)
Image (generated by PyMOL):
PyMOL image
show in jmol