ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 437D:A5:A20

Extra

PDB:
ATOM 1 O3' C A 4 0.333 25.052 34.694 1.00 24.13 O
ATOM 2 P G A 5 0.908 24.802 36.183 1.00 24.77 P
ATOM 3 OP1 G A 5 -0.170 25.113 37.158 1.00 36.13 O
ATOM 4 OP2 G A 5 2.325 25.345 36.381 1.00 24.61 O
ATOM 5 O5' G A 5 1.171 23.244 36.249 1.00 21.80 O
ATOM 6 C5' G A 5 0.065 22.379 36.152 1.00 21.70 C
ATOM 7 C4' G A 5 0.538 21.010 35.814 1.00 21.15 C
ATOM 8 O4' G A 5 1.293 20.998 34.558 1.00 19.42 O
ATOM 9 C3' G A 5 1.473 20.371 36.824 1.00 22.68 C
ATOM 10 O3' G A 5 0.769 19.863 37.947 1.00 27.82 O
ATOM 11 C2' G A 5 2.075 19.257 35.997 1.00 27.22 C
ATOM 12 O2' G A 5 1.158 18.151 35.908 1.00 22.92 O
ATOM 13 C1' G A 5 2.274 19.960 34.642 1.00 23.91 C
ATOM 14 N9 G A 5 3.604 20.583 34.593 1.00 17.39 N
ATOM 15 C8 G A 5 3.927 21.918 34.689 1.00 19.78 C
ATOM 16 N7 G A 5 5.232 22.143 34.622 1.00 16.16 N
ATOM 17 C5 G A 5 5.788 20.880 34.449 1.00 16.15 C
ATOM 18 C6 G A 5 7.095 20.501 34.271 1.00 21.56 C
ATOM 19 O6 G A 5 8.089 21.233 34.252 1.00 19.95 O
ATOM 20 N1 G A 5 7.226 19.103 34.118 1.00 19.99 N
ATOM 21 C2 G A 5 6.185 18.196 34.193 1.00 22.55 C
ATOM 22 N2 G A 5 6.490 16.909 34.157 1.00 19.63 N
ATOM 23 N3 G A 5 4.919 18.564 34.336 1.00 16.92 N
ATOM 24 C4 G A 5 4.796 19.897 34.447 1.00 18.37 C
ATOM 25 P G A 6 1.549 19.635 39.345 1.00 26.32 P
ATOM 26 OP1 G A 6 0.602 19.050 40.357 1.00 28.30 O
ATOM 27 OP2 G A 6 2.294 20.862 39.676 1.00 24.68 O
ATOM 28 O5' G A 6 2.564 18.454 38.994 1.00 24.11 O
TER

ATOM 1 O3' A B 19 0.174 18.306 30.064 1.00 19.02 O
ATOM 2 P A B 20 0.446 17.866 31.557 1.00 22.10 P
ATOM 3 OP1 A B 20 -0.212 18.655 32.530 1.00 21.98 O
ATOM 4 OP2 A B 20 1.957 17.594 31.682 1.00 20.72 O
ATOM 5 O5' A B 20 -0.234 16.436 31.582 1.00 23.80 O
ATOM 6 C5' A B 20 -1.670 16.348 31.674 1.00 33.42 C
ATOM 7 C4' A B 20 -2.093 14.955 31.332 1.00 25.32 C
ATOM 8 O4' A B 20 -1.600 14.675 30.008 1.00 29.61 O
ATOM 9 C3' A B 20 -1.445 13.883 32.186 1.00 39.77 C
ATOM 10 O3' A B 20 -2.210 13.704 33.356 1.00 35.14 O
ATOM 11 C2' A B 20 -1.487 12.680 31.274 1.00 33.36 C
ATOM 12 O2' A B 20 -2.806 12.167 31.222 1.00 37.06 O
ATOM 13 C1' A B 20 -1.221 13.323 29.925 1.00 27.49 C
ATOM 14 N9 A B 20 0.188 13.256 29.664 1.00 22.94 N
ATOM 15 C8 A B 20 1.168 14.224 29.742 1.00 30.39 C
ATOM 16 N7 A B 20 2.355 13.776 29.446 1.00 24.55 N
ATOM 17 C5 A B 20 2.139 12.429 29.139 1.00 30.99 C
ATOM 18 C6 A B 20 2.984 11.409 28.700 1.00 37.62 C
ATOM 19 N6 A B 20 4.261 11.595 28.451 1.00 31.63 N
ATOM 20 N1 A B 20 2.453 10.174 28.510 1.00 42.70 N
ATOM 21 C2 A B 20 1.149 10.005 28.742 1.00 25.37 C
ATOM 22 N3 A B 20 0.251 10.887 29.138 1.00 32.15 N
ATOM 23 C4 A B 20 0.816 12.100 29.308 1.00 26.81 C
ATOM 24 P C B 21 -1.512 13.205 34.707 1.00 38.47 P
ATOM 25 OP1 C B 21 -2.605 13.399 35.746 1.00 39.59 O
ATOM 26 OP2 C B 21 -0.195 13.952 34.859 1.00 45.19 O
ATOM 27 O5' C B 21 -1.088 11.706 34.458 1.00 37.76 O
TER

Atoms:
OP1: (-0.170,25.113,37.158)
OP2: (2.325,25.345,36.381)
C3': (1.473,20.371,36.824)
C1': (2.274,19.960,34.642)
C5': (0.065,22.379,36.152)
O6: (8.089,21.233,34.252)
O4': (1.293,20.998,34.558)
C8: (3.927,21.918,34.689)
C2: (6.185,18.196,34.193)
C6: (7.095,20.501,34.271)
C5: (5.788,20.880,34.449)
C4: (4.796,19.897,34.447)
P: (0.908,24.802,36.183)
C4': (0.538,21.010,35.814)
C2': (2.075,19.257,35.997)
O2': (1.158,18.151,35.908)
N1: (7.226,19.103,34.118)
N2: (6.490,16.909,34.157)
N3: (4.919,18.564,34.336)
N7: (5.232,22.143,34.622)
N9: (3.604,20.583,34.593)
O5': (1.171,23.244,36.249)
O3': (0.769,19.863,37.947)
OP1: (-0.212,18.655,32.530)
OP2: (1.957,17.594,31.682)
C3': (-1.445,13.883,32.186)
C1': (-1.221,13.323,29.925)
C5': (-1.670,16.348,31.674)
O4': (-1.600,14.675,30.008)
C8: (1.168,14.224,29.742)
O2': (-2.806,12.167,31.222)
C6: (2.984,11.409,28.700)
C5: (2.139,12.429,29.139)
C4: (0.816,12.100,29.308)
P: (0.446,17.866,31.557)
C4': (-2.093,14.955,31.332)
C2': (-1.487,12.680,31.274)
C2: (1.149,10.005,28.742)
N1: (2.453,10.174,28.510)
N3: (0.251,10.887,29.138)
N6: (4.261,11.595,28.451)
N7: (2.355,13.776,29.446)
N9: (0.188,13.256,29.664)
O5': (-0.234,16.436,31.582)
O3': (-2.210,13.704,33.356)
Image (generated by PyMOL):
PyMOL image
show in jmol