Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:A10:A14
Extra
PDB:
ATOM 1 O3' G A 9 22.001 -16.283 13.674 1.00 27.16 O
ATOM 2 P C A 10 20.988 -16.932 12.628 1.00 31.03 P
ATOM 3 OP1 C A 10 19.902 -17.559 13.433 1.00 32.05 O
ATOM 4 OP2 C A 10 21.777 -17.753 11.666 1.00 27.22 O
ATOM 5 O5' C A 10 20.374 -15.684 11.855 1.00 32.60 O
ATOM 6 C5' C A 10 18.974 -15.602 11.588 1.00 31.54 C
ATOM 7 C4' C A 10 18.405 -14.359 12.220 1.00 31.90 C
ATOM 8 O4' C A 10 19.092 -13.201 11.701 1.00 34.70 O
ATOM 9 C3' C A 10 16.946 -14.073 11.911 1.00 30.96 C
ATOM 10 O3' C A 10 16.134 -14.808 12.824 1.00 28.96 O
ATOM 11 C2' C A 10 16.837 -12.565 12.192 1.00 30.93 C
ATOM 12 O2' C A 10 16.576 -12.291 13.561 1.00 27.50 O
ATOM 13 C1' C A 10 18.256 -12.066 11.853 1.00 32.70 C
ATOM 14 N1 C A 10 18.484 -11.159 10.702 1.00 31.76 N
ATOM 15 C2 C A 10 18.991 -9.857 10.947 1.00 30.10 C
ATOM 16 O2 C A 10 19.143 -9.471 12.118 1.00 29.24 O
ATOM 17 N3 C A 10 19.306 -9.066 9.901 1.00 29.39 N
ATOM 18 C4 C A 10 19.138 -9.511 8.657 1.00 30.81 C
ATOM 19 N4 C A 10 19.534 -8.725 7.664 1.00 29.26 N
ATOM 20 C5 C A 10 18.572 -10.796 8.378 1.00 32.00 C
ATOM 21 C6 C A 10 18.258 -11.577 9.421 1.00 32.46 C
ATOM 22 P G A 11 15.824 -16.368 12.569 1.00 22.45 P
ATOM 23 OP1 G A 11 16.667 -17.077 13.558 1.00 22.55 O
ATOM 24 OP2 G A 11 15.940 -16.715 11.129 1.00 21.20 O
ATOM 25 O5' G A 11 14.295 -16.472 13.007 1.00 21.36 O
TER
ATOM 1 O3' A B 13 16.348 -13.129 7.200 1.00 22.18 O
ATOM 2 P U B 14 17.031 -14.542 6.880 1.00 25.57 P
ATOM 3 OP1 U B 14 16.661 -14.965 5.496 1.00 23.28 O
ATOM 4 OP2 U B 14 16.709 -15.425 8.029 1.00 22.93 O
ATOM 5 O5' U B 14 18.589 -14.193 6.891 1.00 26.02 O
ATOM 6 C5' U B 14 19.218 -13.638 5.737 1.00 24.82 C
ATOM 7 C4' U B 14 20.717 -13.479 5.942 1.00 25.32 C
ATOM 8 O4' U B 14 21.019 -12.322 6.771 1.00 24.38 O
ATOM 9 C3' U B 14 21.451 -14.648 6.592 1.00 24.80 C
ATOM 10 O3' U B 14 22.706 -14.790 5.951 1.00 27.27 O
ATOM 11 C2' U B 14 21.789 -14.101 7.970 1.00 23.18 C
ATOM 12 O2' U B 14 22.959 -14.693 8.467 1.00 23.54 O
ATOM 13 C1' U B 14 22.090 -12.655 7.612 1.00 22.43 C
ATOM 14 N1 U B 14 22.144 -11.692 8.716 1.00 21.78 N
ATOM 15 C2 U B 14 22.630 -10.439 8.426 1.00 24.65 C
ATOM 16 O2 U B 14 22.992 -10.120 7.307 1.00 30.18 O
ATOM 17 N3 U B 14 22.669 -9.567 9.484 1.00 23.28 N
ATOM 18 C4 U B 14 22.264 -9.814 10.778 1.00 21.91 C
ATOM 19 O4 U B 14 22.276 -8.899 11.607 1.00 18.35 O
ATOM 20 C5 U B 14 21.777 -11.142 11.000 1.00 21.87 C
ATOM 21 C6 U B 14 21.735 -12.013 9.982 1.00 21.03 C
ATOM 22 P A B 15 22.802 -15.544 4.537 1.00 31.92 P
ATOM 23 OP1 A B 15 21.426 -15.912 4.091 1.00 29.91 O
ATOM 24 OP2 A B 15 23.838 -16.605 4.668 1.00 31.19 O
ATOM 25 O5' A B 15 23.361 -14.414 3.556 1.00 34.06 O
TER
ATOM 2 P C A 10 20.988 -16.932 12.628 1.00 31.03 P
ATOM 3 OP1 C A 10 19.902 -17.559 13.433 1.00 32.05 O
ATOM 4 OP2 C A 10 21.777 -17.753 11.666 1.00 27.22 O
ATOM 5 O5' C A 10 20.374 -15.684 11.855 1.00 32.60 O
ATOM 6 C5' C A 10 18.974 -15.602 11.588 1.00 31.54 C
ATOM 7 C4' C A 10 18.405 -14.359 12.220 1.00 31.90 C
ATOM 8 O4' C A 10 19.092 -13.201 11.701 1.00 34.70 O
ATOM 9 C3' C A 10 16.946 -14.073 11.911 1.00 30.96 C
ATOM 10 O3' C A 10 16.134 -14.808 12.824 1.00 28.96 O
ATOM 11 C2' C A 10 16.837 -12.565 12.192 1.00 30.93 C
ATOM 12 O2' C A 10 16.576 -12.291 13.561 1.00 27.50 O
ATOM 13 C1' C A 10 18.256 -12.066 11.853 1.00 32.70 C
ATOM 14 N1 C A 10 18.484 -11.159 10.702 1.00 31.76 N
ATOM 15 C2 C A 10 18.991 -9.857 10.947 1.00 30.10 C
ATOM 16 O2 C A 10 19.143 -9.471 12.118 1.00 29.24 O
ATOM 17 N3 C A 10 19.306 -9.066 9.901 1.00 29.39 N
ATOM 18 C4 C A 10 19.138 -9.511 8.657 1.00 30.81 C
ATOM 19 N4 C A 10 19.534 -8.725 7.664 1.00 29.26 N
ATOM 20 C5 C A 10 18.572 -10.796 8.378 1.00 32.00 C
ATOM 21 C6 C A 10 18.258 -11.577 9.421 1.00 32.46 C
ATOM 22 P G A 11 15.824 -16.368 12.569 1.00 22.45 P
ATOM 23 OP1 G A 11 16.667 -17.077 13.558 1.00 22.55 O
ATOM 24 OP2 G A 11 15.940 -16.715 11.129 1.00 21.20 O
ATOM 25 O5' G A 11 14.295 -16.472 13.007 1.00 21.36 O
TER
ATOM 1 O3' A B 13 16.348 -13.129 7.200 1.00 22.18 O
ATOM 2 P U B 14 17.031 -14.542 6.880 1.00 25.57 P
ATOM 3 OP1 U B 14 16.661 -14.965 5.496 1.00 23.28 O
ATOM 4 OP2 U B 14 16.709 -15.425 8.029 1.00 22.93 O
ATOM 5 O5' U B 14 18.589 -14.193 6.891 1.00 26.02 O
ATOM 6 C5' U B 14 19.218 -13.638 5.737 1.00 24.82 C
ATOM 7 C4' U B 14 20.717 -13.479 5.942 1.00 25.32 C
ATOM 8 O4' U B 14 21.019 -12.322 6.771 1.00 24.38 O
ATOM 9 C3' U B 14 21.451 -14.648 6.592 1.00 24.80 C
ATOM 10 O3' U B 14 22.706 -14.790 5.951 1.00 27.27 O
ATOM 11 C2' U B 14 21.789 -14.101 7.970 1.00 23.18 C
ATOM 12 O2' U B 14 22.959 -14.693 8.467 1.00 23.54 O
ATOM 13 C1' U B 14 22.090 -12.655 7.612 1.00 22.43 C
ATOM 14 N1 U B 14 22.144 -11.692 8.716 1.00 21.78 N
ATOM 15 C2 U B 14 22.630 -10.439 8.426 1.00 24.65 C
ATOM 16 O2 U B 14 22.992 -10.120 7.307 1.00 30.18 O
ATOM 17 N3 U B 14 22.669 -9.567 9.484 1.00 23.28 N
ATOM 18 C4 U B 14 22.264 -9.814 10.778 1.00 21.91 C
ATOM 19 O4 U B 14 22.276 -8.899 11.607 1.00 18.35 O
ATOM 20 C5 U B 14 21.777 -11.142 11.000 1.00 21.87 C
ATOM 21 C6 U B 14 21.735 -12.013 9.982 1.00 21.03 C
ATOM 22 P A B 15 22.802 -15.544 4.537 1.00 31.92 P
ATOM 23 OP1 A B 15 21.426 -15.912 4.091 1.00 29.91 O
ATOM 24 OP2 A B 15 23.838 -16.605 4.668 1.00 31.19 O
ATOM 25 O5' A B 15 23.361 -14.414 3.556 1.00 34.06 O
TER
Atoms:
C2: (18.991,-9.857,10.947)
OP1: (19.902,-17.559,13.433)
OP2: (21.777,-17.753,11.666)
C4: (19.138,-9.511,8.657)
O5': (20.374,-15.684,11.855)
C3': (16.946,-14.073,11.911)
C1': (18.256,-12.066,11.853)
O4': (19.092,-13.201,11.701)
C5': (18.974,-15.602,11.588)
P: (20.988,-16.932,12.628)
O2: (19.143,-9.471,12.118)
C4': (18.405,-14.359,12.220)
C2': (16.837,-12.565,12.192)
O2': (16.576,-12.291,13.561)
N1: (18.484,-11.159,10.702)
N3: (19.306,-9.066,9.901)
N4: (19.534,-8.725,7.664)
C6: (18.258,-11.577,9.421)
C5: (18.572,-10.796,8.378)
O3': (16.134,-14.808,12.824)
OP1: (19.902,-17.559,13.433)
OP2: (21.777,-17.753,11.666)
C4: (19.138,-9.511,8.657)
O5': (20.374,-15.684,11.855)
C3': (16.946,-14.073,11.911)
C1': (18.256,-12.066,11.853)
O4': (19.092,-13.201,11.701)
C5': (18.974,-15.602,11.588)
P: (20.988,-16.932,12.628)
O2: (19.143,-9.471,12.118)
C4': (18.405,-14.359,12.220)
C2': (16.837,-12.565,12.192)
O2': (16.576,-12.291,13.561)
N1: (18.484,-11.159,10.702)
N3: (19.306,-9.066,9.901)
N4: (19.534,-8.725,7.664)
C6: (18.258,-11.577,9.421)
C5: (18.572,-10.796,8.378)
O3': (16.134,-14.808,12.824)
C4: (22.264,-9.814,10.778)
N3: (22.669,-9.567,9.484)
OP1: (16.661,-14.965,5.496)
OP2: (16.709,-15.425,8.029)
C2: (22.630,-10.439,8.426)
C1': (22.090,-12.655,7.612)
C3': (21.451,-14.648,6.592)
O5': (18.589,-14.193,6.891)
O4': (21.019,-12.322,6.771)
C5': (19.218,-13.638,5.737)
P: (17.031,-14.542,6.880)
C4': (20.717,-13.479,5.942)
C2': (21.789,-14.101,7.970)
O2': (22.959,-14.693,8.467)
N1: (22.144,-11.692,8.716)
O4: (22.276,-8.899,11.607)
O2: (22.992,-10.120,7.307)
C6: (21.735,-12.013,9.982)
C5: (21.777,-11.142,11.000)
O3': (22.706,-14.790,5.951)
N3: (22.669,-9.567,9.484)
OP1: (16.661,-14.965,5.496)
OP2: (16.709,-15.425,8.029)
C2: (22.630,-10.439,8.426)
C1': (22.090,-12.655,7.612)
C3': (21.451,-14.648,6.592)
O5': (18.589,-14.193,6.891)
O4': (21.019,-12.322,6.771)
C5': (19.218,-13.638,5.737)
P: (17.031,-14.542,6.880)
C4': (20.717,-13.479,5.942)
C2': (21.789,-14.101,7.970)
O2': (22.959,-14.693,8.467)
N1: (22.144,-11.692,8.716)
O4: (22.276,-8.899,11.607)
O2: (22.992,-10.120,7.307)
C6: (21.735,-12.013,9.982)
C5: (21.777,-11.142,11.000)
O3': (22.706,-14.790,5.951)
Image (generated by PyMOL):