ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCL:0617:02016

Extra

PDB:
ATOM 1 P A A 617 39.735 112.818 95.805 1.00 38.30 P
ATOM 2 OP1 A A 617 39.553 111.666 96.708 1.00 38.76 O
ATOM 3 OP2 A A 617 39.008 112.849 94.518 1.00 40.87 O
ATOM 4 O5' A A 617 39.413 114.161 96.603 1.00 38.73 O
ATOM 5 C5' A A 617 38.976 115.358 95.920 1.00 38.86 C
ATOM 6 C4' A A 617 39.503 116.589 96.629 1.00 39.64 C
ATOM 7 O4' A A 617 39.138 116.502 98.029 1.00 40.32 O
ATOM 8 C3' A A 617 41.017 116.768 96.656 1.00 39.70 C
ATOM 9 O3' A A 617 41.499 117.435 95.494 1.00 39.48 O
ATOM 10 C2' A A 617 41.214 117.647 97.878 1.00 39.92 C
ATOM 11 O2' A A 617 40.915 119.000 97.609 1.00 42.85 O
ATOM 12 C1' A A 617 40.160 117.080 98.826 1.00 41.00 C
ATOM 13 N9 A A 617 40.699 116.050 99.713 1.00 41.36 N
ATOM 14 C8 A A 617 40.414 114.705 99.731 1.00 41.77 C
ATOM 15 N7 A A 617 41.083 114.036 100.638 1.00 41.18 N
ATOM 16 C5 A A 617 41.856 115.005 101.263 1.00 40.38 C
ATOM 17 C6 A A 617 42.788 114.938 102.306 1.00 40.13 C
ATOM 18 N6 A A 617 43.113 113.808 102.940 1.00 39.80 N
ATOM 19 N1 A A 617 43.384 116.087 102.684 1.00 40.26 N
ATOM 20 C2 A A 617 43.053 117.219 102.058 1.00 38.55 C
ATOM 21 N3 A A 617 42.194 117.410 101.070 1.00 38.43 N
ATOM 22 C4 A A 617 41.624 116.249 100.710 1.00 40.02 C
ATOM 23 P A A 618 42.735 116.821 94.668 1.00 42.13 P
ATOM 24 OP1 A A 618 42.771 117.595 93.404 1.00 40.27 O
ATOM 25 OP2 A A 618 42.587 115.344 94.619 1.00 42.44 O
ATOM 26 O5' A A 618 44.039 117.119 95.547 1.00 41.01 O
TER

ATOM 1 O3' U B2015 42.729 108.628 110.235 1.00 42.52 O
ATOM 2 P G B2016 43.945 107.968 109.418 1.00 44.18 P
ATOM 3 OP1 G B2016 43.594 106.533 109.202 1.00 44.47 O
ATOM 4 OP2 G B2016 45.221 108.313 110.105 1.00 42.21 O
ATOM 5 O5' G B2016 43.906 108.700 108.002 1.00 41.97 O
ATOM 6 C5' G B2016 42.842 108.450 107.069 1.00 41.00 C
ATOM 7 C4' G B2016 42.921 109.418 105.916 1.00 41.54 C
ATOM 8 O4' G B2016 42.783 110.774 106.414 1.00 42.56 O
ATOM 9 C3' G B2016 44.244 109.432 105.178 1.00 42.31 C
ATOM 10 O3' G B2016 44.304 108.389 104.220 1.00 44.62 O
ATOM 11 C2' G B2016 44.239 110.814 104.544 1.00 43.02 C
ATOM 12 O2' G B2016 43.423 110.909 103.402 1.00 42.83 O
ATOM 13 C1' G B2016 43.601 111.647 105.654 1.00 43.78 C
ATOM 14 N9 G B2016 44.604 112.233 106.538 1.00 45.60 N
ATOM 15 C8 G B2016 45.162 111.666 107.657 1.00 45.44 C
ATOM 16 N7 G B2016 46.053 112.429 108.227 1.00 46.67 N
ATOM 17 C5 G B2016 46.086 113.571 107.436 1.00 46.12 C
ATOM 18 C6 G B2016 46.870 114.748 107.547 1.00 45.98 C
ATOM 19 O6 G B2016 47.742 115.021 108.380 1.00 46.61 O
ATOM 20 N1 G B2016 46.567 115.657 106.542 1.00 44.97 N
ATOM 21 C2 G B2016 45.647 115.460 105.550 1.00 44.20 C
ATOM 22 N2 G B2016 45.498 116.463 104.674 1.00 44.61 N
ATOM 23 N3 G B2016 44.925 114.366 105.424 1.00 45.11 N
ATOM 24 C4 G B2016 45.191 113.470 106.396 1.00 45.48 C
ATOM 25 P C B2017 45.617 107.468 104.127 1.00 47.51 P
ATOM 26 OP1 C B2017 45.256 106.323 103.261 1.00 47.44 O
ATOM 27 OP2 C B2017 46.144 107.212 105.491 1.00 48.96 O
ATOM 28 O5' C B2017 46.672 108.381 103.364 1.00 46.89 O
TER

Atoms:
OP1: (39.553,111.666,96.708)
OP2: (39.008,112.849,94.518)
C3': (41.017,116.768,96.656)
C1': (40.160,117.080,98.826)
C5': (38.976,115.358,95.920)
O4': (39.138,116.502,98.029)
C8: (40.414,114.705,99.731)
O2': (40.915,119.000,97.609)
C6: (42.788,114.938,102.306)
C5: (41.856,115.005,101.263)
C4: (41.624,116.249,100.710)
P: (39.735,112.818,95.805)
C4': (39.503,116.589,96.629)
C2': (41.214,117.647,97.878)
C2: (43.053,117.219,102.058)
N1: (43.384,116.087,102.684)
N3: (42.194,117.410,101.070)
N6: (43.113,113.808,102.940)
N7: (41.083,114.036,100.638)
N9: (40.699,116.050,99.713)
O5': (39.413,114.161,96.603)
O3': (41.499,117.435,95.494)
OP1: (43.594,106.533,109.202)
OP2: (45.221,108.313,110.105)
C3': (44.244,109.432,105.178)
C1': (43.601,111.647,105.654)
C5': (42.842,108.450,107.069)
O6: (47.742,115.021,108.380)
O4': (42.783,110.774,106.414)
C8: (45.162,111.666,107.657)
C2: (45.647,115.460,105.550)
C6: (46.870,114.748,107.547)
C5: (46.086,113.571,107.436)
C4: (45.191,113.470,106.396)
P: (43.945,107.968,109.418)
C4': (42.921,109.418,105.916)
C2': (44.239,110.814,104.544)
O2': (43.423,110.909,103.402)
N1: (46.567,115.657,106.542)
N2: (45.498,116.463,104.674)
N3: (44.925,114.366,105.424)
N7: (46.053,112.429,108.227)
N9: (44.604,112.233,106.538)
O5': (43.906,108.700,108.002)
O3': (44.304,108.389,104.220)
Image (generated by PyMOL):
PyMOL image
show in jmol