Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:C10:C14
Extra
PDB:
ATOM 1 O3' G A 9 -30.719 -40.269 1.750 1.00 22.65 O
ATOM 2 P C A 10 -29.461 -40.594 0.820 1.00 21.78 P
ATOM 3 OP1 C A 10 -29.966 -41.277 -0.390 1.00 28.17 O
ATOM 4 OP2 C A 10 -28.473 -41.285 1.687 1.00 20.40 O
ATOM 5 O5' C A 10 -28.960 -39.147 0.377 1.00 19.54 O
ATOM 6 C5' C A 10 -28.869 -38.798 -0.997 1.00 20.20 C
ATOM 7 C4' C A 10 -29.644 -37.530 -1.288 1.00 22.25 C
ATOM 8 O4' C A 10 -29.154 -36.448 -0.475 1.00 23.21 O
ATOM 9 C3' C A 10 -29.477 -36.997 -2.704 1.00 24.27 C
ATOM 10 O3' C A 10 -30.442 -37.589 -3.562 1.00 27.70 O
ATOM 11 C2' C A 10 -29.828 -35.511 -2.566 1.00 23.53 C
ATOM 12 O2' C A 10 -31.184 -35.252 -2.848 1.00 22.85 O
ATOM 13 C1' C A 10 -29.567 -35.238 -1.080 1.00 24.86 C
ATOM 14 N1 C A 10 -28.622 -34.159 -0.749 1.00 26.01 N
ATOM 15 C2 C A 10 -29.141 -32.897 -0.444 1.00 25.74 C
ATOM 16 O2 C A 10 -30.361 -32.710 -0.540 1.00 26.21 O
ATOM 17 N3 C A 10 -28.307 -31.920 -0.058 1.00 24.39 N
ATOM 18 C4 C A 10 -27.000 -32.158 0.020 1.00 26.28 C
ATOM 19 N4 C A 10 -26.217 -31.176 0.447 1.00 28.20 N
ATOM 20 C5 C A 10 -26.437 -33.418 -0.328 1.00 26.29 C
ATOM 21 C6 C A 10 -27.275 -34.380 -0.709 1.00 26.56 C
ATOM 22 P G A 11 -30.328 -39.140 -3.958 1.00 30.97 P
ATOM 23 OP1 G A 11 -31.367 -39.842 -3.147 1.00 28.44 O
ATOM 24 OP2 G A 11 -28.902 -39.590 -3.896 1.00 27.78 O
ATOM 25 O5' G A 11 -30.788 -39.131 -5.483 1.00 27.71 O
TER
ATOM 1 O3' A B 13 -24.658 -35.497 -3.174 1.00 8.19 O
ATOM 2 P U B 14 -24.596 -36.997 -2.620 1.00 13.76 P
ATOM 3 OP1 U B 14 -23.295 -37.600 -3.016 1.00 12.03 O
ATOM 4 OP2 U B 14 -25.868 -37.698 -2.950 1.00 11.94 O
ATOM 5 O5' U B 14 -24.553 -36.785 -1.041 1.00 17.88 O
ATOM 6 C5' U B 14 -23.433 -36.147 -0.416 1.00 15.32 C
ATOM 7 C4' U B 14 -23.552 -36.217 1.088 1.00 11.82 C
ATOM 8 O4' U B 14 -24.498 -35.217 1.547 1.00 13.00 O
ATOM 9 C3' U B 14 -24.073 -37.542 1.627 1.00 11.07 C
ATOM 10 O3' U B 14 -23.486 -37.783 2.889 1.00 11.40 O
ATOM 11 C2' U B 14 -25.530 -37.222 1.909 1.00 12.15 C
ATOM 12 O2' U B 14 -26.069 -38.121 2.849 1.00 14.19 O
ATOM 13 C1' U B 14 -25.366 -35.816 2.477 1.00 14.34 C
ATOM 14 N1 U B 14 -26.540 -34.948 2.679 1.00 16.66 N
ATOM 15 C2 U B 14 -26.373 -33.833 3.476 1.00 18.75 C
ATOM 16 O2 U B 14 -25.325 -33.566 4.030 1.00 23.74 O
ATOM 17 N3 U B 14 -27.476 -33.041 3.611 1.00 20.79 N
ATOM 18 C4 U B 14 -28.712 -33.241 3.052 1.00 22.18 C
ATOM 19 O4 U B 14 -29.610 -32.406 3.233 1.00 23.80 O
ATOM 20 C5 U B 14 -28.816 -34.427 2.263 1.00 21.51 C
ATOM 21 C6 U B 14 -27.750 -35.218 2.108 1.00 17.91 C
ATOM 22 P A B 15 -21.934 -38.175 2.988 1.00 16.46 P
ATOM 23 OP1 A B 15 -21.424 -38.369 1.606 1.00 13.01 O
ATOM 24 OP2 A B 15 -21.785 -39.266 3.992 1.00 14.10 O
ATOM 25 O5' A B 15 -21.236 -36.862 3.576 1.00 17.27 O
TER
ATOM 2 P C A 10 -29.461 -40.594 0.820 1.00 21.78 P
ATOM 3 OP1 C A 10 -29.966 -41.277 -0.390 1.00 28.17 O
ATOM 4 OP2 C A 10 -28.473 -41.285 1.687 1.00 20.40 O
ATOM 5 O5' C A 10 -28.960 -39.147 0.377 1.00 19.54 O
ATOM 6 C5' C A 10 -28.869 -38.798 -0.997 1.00 20.20 C
ATOM 7 C4' C A 10 -29.644 -37.530 -1.288 1.00 22.25 C
ATOM 8 O4' C A 10 -29.154 -36.448 -0.475 1.00 23.21 O
ATOM 9 C3' C A 10 -29.477 -36.997 -2.704 1.00 24.27 C
ATOM 10 O3' C A 10 -30.442 -37.589 -3.562 1.00 27.70 O
ATOM 11 C2' C A 10 -29.828 -35.511 -2.566 1.00 23.53 C
ATOM 12 O2' C A 10 -31.184 -35.252 -2.848 1.00 22.85 O
ATOM 13 C1' C A 10 -29.567 -35.238 -1.080 1.00 24.86 C
ATOM 14 N1 C A 10 -28.622 -34.159 -0.749 1.00 26.01 N
ATOM 15 C2 C A 10 -29.141 -32.897 -0.444 1.00 25.74 C
ATOM 16 O2 C A 10 -30.361 -32.710 -0.540 1.00 26.21 O
ATOM 17 N3 C A 10 -28.307 -31.920 -0.058 1.00 24.39 N
ATOM 18 C4 C A 10 -27.000 -32.158 0.020 1.00 26.28 C
ATOM 19 N4 C A 10 -26.217 -31.176 0.447 1.00 28.20 N
ATOM 20 C5 C A 10 -26.437 -33.418 -0.328 1.00 26.29 C
ATOM 21 C6 C A 10 -27.275 -34.380 -0.709 1.00 26.56 C
ATOM 22 P G A 11 -30.328 -39.140 -3.958 1.00 30.97 P
ATOM 23 OP1 G A 11 -31.367 -39.842 -3.147 1.00 28.44 O
ATOM 24 OP2 G A 11 -28.902 -39.590 -3.896 1.00 27.78 O
ATOM 25 O5' G A 11 -30.788 -39.131 -5.483 1.00 27.71 O
TER
ATOM 1 O3' A B 13 -24.658 -35.497 -3.174 1.00 8.19 O
ATOM 2 P U B 14 -24.596 -36.997 -2.620 1.00 13.76 P
ATOM 3 OP1 U B 14 -23.295 -37.600 -3.016 1.00 12.03 O
ATOM 4 OP2 U B 14 -25.868 -37.698 -2.950 1.00 11.94 O
ATOM 5 O5' U B 14 -24.553 -36.785 -1.041 1.00 17.88 O
ATOM 6 C5' U B 14 -23.433 -36.147 -0.416 1.00 15.32 C
ATOM 7 C4' U B 14 -23.552 -36.217 1.088 1.00 11.82 C
ATOM 8 O4' U B 14 -24.498 -35.217 1.547 1.00 13.00 O
ATOM 9 C3' U B 14 -24.073 -37.542 1.627 1.00 11.07 C
ATOM 10 O3' U B 14 -23.486 -37.783 2.889 1.00 11.40 O
ATOM 11 C2' U B 14 -25.530 -37.222 1.909 1.00 12.15 C
ATOM 12 O2' U B 14 -26.069 -38.121 2.849 1.00 14.19 O
ATOM 13 C1' U B 14 -25.366 -35.816 2.477 1.00 14.34 C
ATOM 14 N1 U B 14 -26.540 -34.948 2.679 1.00 16.66 N
ATOM 15 C2 U B 14 -26.373 -33.833 3.476 1.00 18.75 C
ATOM 16 O2 U B 14 -25.325 -33.566 4.030 1.00 23.74 O
ATOM 17 N3 U B 14 -27.476 -33.041 3.611 1.00 20.79 N
ATOM 18 C4 U B 14 -28.712 -33.241 3.052 1.00 22.18 C
ATOM 19 O4 U B 14 -29.610 -32.406 3.233 1.00 23.80 O
ATOM 20 C5 U B 14 -28.816 -34.427 2.263 1.00 21.51 C
ATOM 21 C6 U B 14 -27.750 -35.218 2.108 1.00 17.91 C
ATOM 22 P A B 15 -21.934 -38.175 2.988 1.00 16.46 P
ATOM 23 OP1 A B 15 -21.424 -38.369 1.606 1.00 13.01 O
ATOM 24 OP2 A B 15 -21.785 -39.266 3.992 1.00 14.10 O
ATOM 25 O5' A B 15 -21.236 -36.862 3.576 1.00 17.27 O
TER
Atoms:
C2: (-29.141,-32.897,-0.444)
OP1: (-29.966,-41.277,-0.390)
OP2: (-28.473,-41.285,1.687)
C4: (-27.000,-32.158,0.020)
O5': (-28.960,-39.147,0.377)
C3': (-29.477,-36.997,-2.704)
C1': (-29.567,-35.238,-1.080)
O4': (-29.154,-36.448,-0.475)
C5': (-28.869,-38.798,-0.997)
P: (-29.461,-40.594,0.820)
O2: (-30.361,-32.710,-0.540)
C4': (-29.644,-37.530,-1.288)
C2': (-29.828,-35.511,-2.566)
O2': (-31.184,-35.252,-2.848)
N1: (-28.622,-34.159,-0.749)
N3: (-28.307,-31.920,-0.058)
N4: (-26.217,-31.176,0.447)
C6: (-27.275,-34.380,-0.709)
C5: (-26.437,-33.418,-0.328)
O3': (-30.442,-37.589,-3.562)
OP1: (-29.966,-41.277,-0.390)
OP2: (-28.473,-41.285,1.687)
C4: (-27.000,-32.158,0.020)
O5': (-28.960,-39.147,0.377)
C3': (-29.477,-36.997,-2.704)
C1': (-29.567,-35.238,-1.080)
O4': (-29.154,-36.448,-0.475)
C5': (-28.869,-38.798,-0.997)
P: (-29.461,-40.594,0.820)
O2: (-30.361,-32.710,-0.540)
C4': (-29.644,-37.530,-1.288)
C2': (-29.828,-35.511,-2.566)
O2': (-31.184,-35.252,-2.848)
N1: (-28.622,-34.159,-0.749)
N3: (-28.307,-31.920,-0.058)
N4: (-26.217,-31.176,0.447)
C6: (-27.275,-34.380,-0.709)
C5: (-26.437,-33.418,-0.328)
O3': (-30.442,-37.589,-3.562)
C4: (-28.712,-33.241,3.052)
N3: (-27.476,-33.041,3.611)
OP1: (-23.295,-37.600,-3.016)
OP2: (-25.868,-37.698,-2.950)
C2: (-26.373,-33.833,3.476)
C1': (-25.366,-35.816,2.477)
C3': (-24.073,-37.542,1.627)
O5': (-24.553,-36.785,-1.041)
O4': (-24.498,-35.217,1.547)
C5': (-23.433,-36.147,-0.416)
P: (-24.596,-36.997,-2.620)
C4': (-23.552,-36.217,1.088)
C2': (-25.530,-37.222,1.909)
O2': (-26.069,-38.121,2.849)
N1: (-26.540,-34.948,2.679)
O4: (-29.610,-32.406,3.233)
O2: (-25.325,-33.566,4.030)
C6: (-27.750,-35.218,2.108)
C5: (-28.816,-34.427,2.263)
O3': (-23.486,-37.783,2.889)
N3: (-27.476,-33.041,3.611)
OP1: (-23.295,-37.600,-3.016)
OP2: (-25.868,-37.698,-2.950)
C2: (-26.373,-33.833,3.476)
C1': (-25.366,-35.816,2.477)
C3': (-24.073,-37.542,1.627)
O5': (-24.553,-36.785,-1.041)
O4': (-24.498,-35.217,1.547)
C5': (-23.433,-36.147,-0.416)
P: (-24.596,-36.997,-2.620)
C4': (-23.552,-36.217,1.088)
C2': (-25.530,-37.222,1.909)
O2': (-26.069,-38.121,2.849)
N1: (-26.540,-34.948,2.679)
O4: (-29.610,-32.406,3.233)
O2: (-25.325,-33.566,4.030)
C6: (-27.750,-35.218,2.108)
C5: (-28.816,-34.427,2.263)
O3': (-23.486,-37.783,2.889)
Image (generated by PyMOL):