ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GX5:A61:A22

Extra

PDB:
ATOM 1 O3' A A 60 16.497 -7.752 24.306 1.00 40.49 O
ATOM 2 P A A 61 16.502 -8.939 23.240 1.00 45.90 P
ATOM 3 OP1 A A 61 17.773 -8.828 22.484 1.00 49.76 O
ATOM 4 OP2 A A 61 15.170 -8.919 22.584 1.00 40.98 O
ATOM 5 O5' A A 61 16.595 -10.286 24.108 1.00 36.85 O
ATOM 6 C5' A A 61 17.694 -10.501 24.963 1.00 35.12 C
ATOM 7 C4' A A 61 17.394 -11.635 25.909 1.00 34.26 C
ATOM 8 O4' A A 61 16.288 -11.258 26.763 1.00 36.91 O
ATOM 9 C3' A A 61 16.915 -12.889 25.204 1.00 38.48 C
ATOM 10 O3' A A 61 18.041 -13.636 24.768 1.00 37.88 O
ATOM 11 C2' A A 61 16.177 -13.572 26.347 1.00 37.66 C
ATOM 12 O2' A A 61 17.091 -14.140 27.254 1.00 36.26 O
ATOM 13 C1' A A 61 15.474 -12.397 27.017 1.00 37.17 C
ATOM 14 N9 A A 61 14.129 -12.151 26.494 1.00 38.70 N
ATOM 15 C8 A A 61 13.788 -11.408 25.387 1.00 40.08 C
ATOM 16 N7 A A 61 12.492 -11.354 25.160 1.00 38.82 N
ATOM 17 C5 A A 61 11.946 -12.117 26.183 1.00 39.05 C
ATOM 18 C6 A A 61 10.617 -12.463 26.514 1.00 42.39 C
ATOM 19 N6 A A 61 9.546 -12.063 25.814 1.00 42.97 N
ATOM 20 N1 A A 61 10.418 -13.238 27.606 1.00 41.80 N
ATOM 21 C2 A A 61 11.482 -13.635 28.306 1.00 41.20 C
ATOM 22 N3 A A 61 12.770 -13.376 28.093 1.00 40.67 N
ATOM 23 C4 A A 61 12.939 -12.609 27.009 1.00 37.10 C
ATOM 24 P U A 62 17.862 -15.065 24.069 1.00 41.09 P
ATOM 25 OP1 U A 62 16.699 -15.769 24.661 1.00 40.75 O
ATOM 26 OP2 U A 62 19.205 -15.679 24.029 1.00 42.51 O
ATOM 27 O5' U A 62 17.456 -14.706 22.574 1.00 49.10 O
TER

ATOM 1 O3' G B 21 1.764 -6.631 24.138 1.00 58.77 O
ATOM 2 P G B 22 1.811 -8.047 23.400 1.00 63.10 P
ATOM 3 OP1 G B 22 1.995 -7.779 21.954 1.00 67.01 O
ATOM 4 OP2 G B 22 0.677 -8.877 23.878 1.00 59.63 O
ATOM 5 O5' G B 22 3.187 -8.672 23.903 1.00 56.95 O
ATOM 6 C5' G B 22 4.352 -8.391 23.152 1.00 56.96 C
ATOM 7 C4' G B 22 5.491 -9.314 23.540 1.00 56.92 C
ATOM 8 O4' G B 22 5.568 -9.387 24.987 1.00 58.97 O
ATOM 9 C3' G B 22 5.344 -10.774 23.139 1.00 53.00 C
ATOM 10 O3' G B 22 5.660 -10.991 21.775 1.00 45.70 O
ATOM 11 C2' G B 22 6.395 -11.394 24.054 1.00 51.78 C
ATOM 12 O2' G B 22 7.710 -11.096 23.644 1.00 48.45 O
ATOM 13 C1' G B 22 6.079 -10.658 25.351 1.00 57.31 C
ATOM 14 N9 G B 22 5.095 -11.384 26.148 1.00 61.74 N
ATOM 15 C8 G B 22 3.729 -11.228 26.182 1.00 66.36 C
ATOM 16 N7 G B 22 3.131 -12.058 26.999 1.00 66.42 N
ATOM 17 C5 G B 22 4.175 -12.805 27.531 1.00 61.88 C
ATOM 18 C6 G B 22 4.156 -13.853 28.469 1.00 61.84 C
ATOM 19 O6 G B 22 3.168 -14.338 29.037 1.00 62.17 O
ATOM 20 N1 G B 22 5.442 -14.336 28.725 1.00 61.36 N
ATOM 21 C2 G B 22 6.602 -13.864 28.152 1.00 56.20 C
ATOM 22 N2 G B 22 7.760 -14.443 28.511 1.00 49.18 N
ATOM 23 N3 G B 22 6.623 -12.877 27.274 1.00 57.20 N
ATOM 24 C4 G B 22 5.382 -12.404 27.018 1.00 59.24 C
ATOM 25 P A B 23 5.406 -12.446 21.163 1.00 67.34 P
ATOM 26 OP1 A B 23 5.021 -13.358 22.261 1.00 73.72 O
ATOM 27 OP2 A B 23 6.541 -12.816 20.290 1.00 65.43 O
ATOM 28 O5' A B 23 4.107 -12.190 20.276 1.00 62.26 O
TER

Atoms:
OP1: (17.773,-8.828,22.484)
OP2: (15.170,-8.919,22.584)
C3': (16.915,-12.889,25.204)
C1': (15.474,-12.397,27.017)
C5': (17.694,-10.501,24.963)
O4': (16.288,-11.258,26.763)
C8: (13.788,-11.408,25.387)
O2': (17.091,-14.140,27.254)
C6: (10.617,-12.463,26.514)
C5: (11.946,-12.117,26.183)
C4: (12.939,-12.609,27.009)
P: (16.502,-8.939,23.240)
C4': (17.394,-11.635,25.909)
C2': (16.177,-13.572,26.347)
C2: (11.482,-13.635,28.306)
N1: (10.418,-13.238,27.606)
N3: (12.770,-13.376,28.093)
N6: (9.546,-12.063,25.814)
N7: (12.492,-11.354,25.160)
N9: (14.129,-12.151,26.494)
O5': (16.595,-10.286,24.108)
O3': (18.041,-13.636,24.768)
OP1: (1.995,-7.779,21.954)
OP2: (0.677,-8.877,23.878)
C3': (5.344,-10.774,23.139)
C1': (6.079,-10.658,25.351)
C5': (4.352,-8.391,23.152)
O6: (3.168,-14.338,29.037)
O4': (5.568,-9.387,24.987)
C8: (3.729,-11.228,26.182)
C2: (6.602,-13.864,28.152)
C6: (4.156,-13.853,28.469)
C5: (4.175,-12.805,27.531)
C4: (5.382,-12.404,27.018)
P: (1.811,-8.047,23.400)
C4': (5.491,-9.314,23.540)
C2': (6.395,-11.394,24.054)
O2': (7.710,-11.096,23.644)
N1: (5.442,-14.336,28.725)
N2: (7.760,-14.443,28.511)
N3: (6.623,-12.877,27.274)
N7: (3.131,-12.058,26.999)
N9: (5.095,-11.384,26.148)
O5': (3.187,-8.672,23.903)
O3': (5.660,-10.991,21.775)
Image (generated by PyMOL):
PyMOL image
show in jmol