Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1484:A1404
Extra
PDB:
ATOM 1 O3' A A1483 4.831 -54.680 2.473 1.00 98.43 O
ATOM 2 P A A1484 4.881 -56.245 2.843 1.00 90.19 P
ATOM 3 OP1 A A1484 6.195 -56.793 2.429 1.00 92.82 O
ATOM 4 OP2 A A1484 3.633 -56.876 2.324 1.00 87.56 O
ATOM 5 O5' A A1484 4.788 -56.276 4.440 1.00 97.29 O
ATOM 6 C5' A A1484 5.821 -55.725 5.267 1.00 97.31 C
ATOM 7 C4' A A1484 5.387 -55.722 6.717 1.00 99.15 C
ATOM 8 O4' A A1484 4.175 -54.928 6.833 1.00101.27 O
ATOM 9 C3' A A1484 5.024 -57.070 7.324 1.00100.59 C
ATOM 10 O3' A A1484 6.159 -57.770 7.827 1.00102.86 O
ATOM 11 C2' A A1484 4.072 -56.673 8.445 1.00 99.10 C
ATOM 12 O2' A A1484 4.787 -56.261 9.591 1.00 98.66 O
ATOM 13 C1' A A1484 3.334 -55.478 7.827 1.00 97.38 C
ATOM 14 N9 A A1484 2.045 -55.830 7.211 1.00101.46 N
ATOM 15 C8 A A1484 1.776 -56.905 6.388 1.00103.08 C
ATOM 16 N7 A A1484 0.519 -57.001 6.032 1.00103.05 N
ATOM 17 C5 A A1484 -0.088 -55.912 6.646 1.00100.30 C
ATOM 18 C6 A A1484 -1.424 -55.457 6.665 1.00103.86 C
ATOM 19 N6 A A1484 -2.430 -56.077 6.042 1.00108.08 N
ATOM 20 N1 A A1484 -1.694 -54.330 7.361 1.00102.66 N
ATOM 21 C2 A A1484 -0.694 -53.715 7.999 1.00 98.88 C
ATOM 22 N3 A A1484 0.597 -54.048 8.068 1.00101.07 N
ATOM 23 C4 A A1484 0.841 -55.171 7.362 1.00101.37 C
TER
ATOM 1 O3' G B1403 -9.314 -49.057 7.632 1.00 80.23 O
ATOM 2 P G B1404 -9.525 -50.203 8.757 1.00 87.66 P
ATOM 3 OP1 G B1404 -10.980 -50.482 8.871 1.00 97.43 O
ATOM 4 OP2 G B1404 -8.758 -49.838 9.979 1.00 89.44 O
ATOM 5 O5' G B1404 -8.825 -51.475 8.097 1.00 88.68 O
ATOM 6 C5' G B1404 -8.277 -52.524 8.888 1.00 98.39 C
ATOM 7 C4' G B1404 -7.030 -53.093 8.227 1.00 98.34 C
ATOM 8 O4' G B1404 -6.100 -52.026 7.920 1.00 86.36 O
ATOM 9 C3' G B1404 -6.272 -54.064 9.115 1.00 99.79 C
ATOM 10 O3' G B1404 -6.768 -55.380 8.875 1.00 99.83 O
ATOM 11 C2' G B1404 -4.816 -53.888 8.681 1.00 96.99 C
ATOM 12 O2' G B1404 -4.473 -54.711 7.588 1.00 99.07 O
ATOM 13 C1' G B1404 -4.779 -52.415 8.253 1.00 93.03 C
ATOM 14 N9 G B1404 -4.304 -51.471 9.262 1.00 90.23 N
ATOM 15 C8 G B1404 -4.897 -50.274 9.579 1.00 87.93 C
ATOM 16 N7 G B1404 -4.290 -49.634 10.535 1.00 85.37 N
ATOM 17 C5 G B1404 -3.223 -50.449 10.872 1.00 86.09 C
ATOM 18 C6 G B1404 -2.218 -50.275 11.852 1.00 85.17 C
ATOM 19 O6 G B1404 -2.078 -49.335 12.650 1.00 83.47 O
ATOM 20 N1 G B1404 -1.316 -51.337 11.859 1.00 80.89 N
ATOM 21 C2 G B1404 -1.382 -52.430 11.028 1.00 86.62 C
ATOM 22 N2 G B1404 -0.409 -53.339 11.175 1.00 87.11 N
ATOM 23 N3 G B1404 -2.331 -52.612 10.115 1.00 88.91 N
ATOM 24 C4 G B1404 -3.209 -51.588 10.090 1.00 88.00 C
ATOM 25 P A B1405 -8.090 -55.886 9.642 1.00106.24 P
ATOM 26 OP1 A B1405 -9.318 -55.732 8.796 1.00104.32 O
ATOM 27 OP2 A B1405 -8.034 -55.245 10.979 1.00102.43 O
ATOM 28 O5' A B1405 -7.826 -57.443 9.808 1.00 99.45 O
TER
ATOM 2 P A A1484 4.881 -56.245 2.843 1.00 90.19 P
ATOM 3 OP1 A A1484 6.195 -56.793 2.429 1.00 92.82 O
ATOM 4 OP2 A A1484 3.633 -56.876 2.324 1.00 87.56 O
ATOM 5 O5' A A1484 4.788 -56.276 4.440 1.00 97.29 O
ATOM 6 C5' A A1484 5.821 -55.725 5.267 1.00 97.31 C
ATOM 7 C4' A A1484 5.387 -55.722 6.717 1.00 99.15 C
ATOM 8 O4' A A1484 4.175 -54.928 6.833 1.00101.27 O
ATOM 9 C3' A A1484 5.024 -57.070 7.324 1.00100.59 C
ATOM 10 O3' A A1484 6.159 -57.770 7.827 1.00102.86 O
ATOM 11 C2' A A1484 4.072 -56.673 8.445 1.00 99.10 C
ATOM 12 O2' A A1484 4.787 -56.261 9.591 1.00 98.66 O
ATOM 13 C1' A A1484 3.334 -55.478 7.827 1.00 97.38 C
ATOM 14 N9 A A1484 2.045 -55.830 7.211 1.00101.46 N
ATOM 15 C8 A A1484 1.776 -56.905 6.388 1.00103.08 C
ATOM 16 N7 A A1484 0.519 -57.001 6.032 1.00103.05 N
ATOM 17 C5 A A1484 -0.088 -55.912 6.646 1.00100.30 C
ATOM 18 C6 A A1484 -1.424 -55.457 6.665 1.00103.86 C
ATOM 19 N6 A A1484 -2.430 -56.077 6.042 1.00108.08 N
ATOM 20 N1 A A1484 -1.694 -54.330 7.361 1.00102.66 N
ATOM 21 C2 A A1484 -0.694 -53.715 7.999 1.00 98.88 C
ATOM 22 N3 A A1484 0.597 -54.048 8.068 1.00101.07 N
ATOM 23 C4 A A1484 0.841 -55.171 7.362 1.00101.37 C
TER
ATOM 1 O3' G B1403 -9.314 -49.057 7.632 1.00 80.23 O
ATOM 2 P G B1404 -9.525 -50.203 8.757 1.00 87.66 P
ATOM 3 OP1 G B1404 -10.980 -50.482 8.871 1.00 97.43 O
ATOM 4 OP2 G B1404 -8.758 -49.838 9.979 1.00 89.44 O
ATOM 5 O5' G B1404 -8.825 -51.475 8.097 1.00 88.68 O
ATOM 6 C5' G B1404 -8.277 -52.524 8.888 1.00 98.39 C
ATOM 7 C4' G B1404 -7.030 -53.093 8.227 1.00 98.34 C
ATOM 8 O4' G B1404 -6.100 -52.026 7.920 1.00 86.36 O
ATOM 9 C3' G B1404 -6.272 -54.064 9.115 1.00 99.79 C
ATOM 10 O3' G B1404 -6.768 -55.380 8.875 1.00 99.83 O
ATOM 11 C2' G B1404 -4.816 -53.888 8.681 1.00 96.99 C
ATOM 12 O2' G B1404 -4.473 -54.711 7.588 1.00 99.07 O
ATOM 13 C1' G B1404 -4.779 -52.415 8.253 1.00 93.03 C
ATOM 14 N9 G B1404 -4.304 -51.471 9.262 1.00 90.23 N
ATOM 15 C8 G B1404 -4.897 -50.274 9.579 1.00 87.93 C
ATOM 16 N7 G B1404 -4.290 -49.634 10.535 1.00 85.37 N
ATOM 17 C5 G B1404 -3.223 -50.449 10.872 1.00 86.09 C
ATOM 18 C6 G B1404 -2.218 -50.275 11.852 1.00 85.17 C
ATOM 19 O6 G B1404 -2.078 -49.335 12.650 1.00 83.47 O
ATOM 20 N1 G B1404 -1.316 -51.337 11.859 1.00 80.89 N
ATOM 21 C2 G B1404 -1.382 -52.430 11.028 1.00 86.62 C
ATOM 22 N2 G B1404 -0.409 -53.339 11.175 1.00 87.11 N
ATOM 23 N3 G B1404 -2.331 -52.612 10.115 1.00 88.91 N
ATOM 24 C4 G B1404 -3.209 -51.588 10.090 1.00 88.00 C
ATOM 25 P A B1405 -8.090 -55.886 9.642 1.00106.24 P
ATOM 26 OP1 A B1405 -9.318 -55.732 8.796 1.00104.32 O
ATOM 27 OP2 A B1405 -8.034 -55.245 10.979 1.00102.43 O
ATOM 28 O5' A B1405 -7.826 -57.443 9.808 1.00 99.45 O
TER
Atoms:
OP1: (6.195,-56.793,2.429)
OP2: (3.633,-56.876,2.324)
C3': (5.024,-57.070,7.324)
C1': (3.334,-55.478,7.827)
C5': (5.821,-55.725,5.267)
O4': (4.175,-54.928,6.833)
C8: (1.776,-56.905,6.388)
O2': (4.787,-56.261,9.591)
C6: (-1.424,-55.457,6.665)
C5: (-0.088,-55.912,6.646)
C4: (0.841,-55.171,7.362)
P: (4.881,-56.245,2.843)
C4': (5.387,-55.722,6.717)
C2': (4.072,-56.673,8.445)
C2: (-0.694,-53.715,7.999)
N1: (-1.694,-54.330,7.361)
N3: (0.597,-54.048,8.068)
N6: (-2.430,-56.077,6.042)
N7: (0.519,-57.001,6.032)
N9: (2.045,-55.830,7.211)
O5': (4.788,-56.276,4.440)
O3': (6.159,-57.770,7.827)
OP2: (3.633,-56.876,2.324)
C3': (5.024,-57.070,7.324)
C1': (3.334,-55.478,7.827)
C5': (5.821,-55.725,5.267)
O4': (4.175,-54.928,6.833)
C8: (1.776,-56.905,6.388)
O2': (4.787,-56.261,9.591)
C6: (-1.424,-55.457,6.665)
C5: (-0.088,-55.912,6.646)
C4: (0.841,-55.171,7.362)
P: (4.881,-56.245,2.843)
C4': (5.387,-55.722,6.717)
C2': (4.072,-56.673,8.445)
C2: (-0.694,-53.715,7.999)
N1: (-1.694,-54.330,7.361)
N3: (0.597,-54.048,8.068)
N6: (-2.430,-56.077,6.042)
N7: (0.519,-57.001,6.032)
N9: (2.045,-55.830,7.211)
O5': (4.788,-56.276,4.440)
O3': (6.159,-57.770,7.827)
OP1: (-10.980,-50.482,8.871)
OP2: (-8.758,-49.838,9.979)
C3': (-6.272,-54.064,9.115)
C1': (-4.779,-52.415,8.253)
C5': (-8.277,-52.524,8.888)
O6: (-2.078,-49.335,12.650)
O4': (-6.100,-52.026,7.920)
C8: (-4.897,-50.274,9.579)
C2: (-1.382,-52.430,11.028)
C6: (-2.218,-50.275,11.852)
C5: (-3.223,-50.449,10.872)
C4: (-3.209,-51.588,10.090)
P: (-9.525,-50.203,8.757)
C4': (-7.030,-53.093,8.227)
C2': (-4.816,-53.888,8.681)
O2': (-4.473,-54.711,7.588)
N1: (-1.316,-51.337,11.859)
N2: (-0.409,-53.339,11.175)
N3: (-2.331,-52.612,10.115)
N7: (-4.290,-49.634,10.535)
N9: (-4.304,-51.471,9.262)
O5': (-8.825,-51.475,8.097)
O3': (-6.768,-55.380,8.875)
OP2: (-8.758,-49.838,9.979)
C3': (-6.272,-54.064,9.115)
C1': (-4.779,-52.415,8.253)
C5': (-8.277,-52.524,8.888)
O6: (-2.078,-49.335,12.650)
O4': (-6.100,-52.026,7.920)
C8: (-4.897,-50.274,9.579)
C2: (-1.382,-52.430,11.028)
C6: (-2.218,-50.275,11.852)
C5: (-3.223,-50.449,10.872)
C4: (-3.209,-51.588,10.090)
P: (-9.525,-50.203,8.757)
C4': (-7.030,-53.093,8.227)
C2': (-4.816,-53.888,8.681)
O2': (-4.473,-54.711,7.588)
N1: (-1.316,-51.337,11.859)
N2: (-0.409,-53.339,11.175)
N3: (-2.331,-52.612,10.115)
N7: (-4.290,-49.634,10.535)
N9: (-4.304,-51.471,9.262)
O5': (-8.825,-51.475,8.097)
O3': (-6.768,-55.380,8.875)
Image (generated by PyMOL):