Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C8:C31
Extra
PDB:
ATOM 1 O3' U A 7 24.240 -20.746 -54.053 1.00 44.47 O
ATOM 2 P A A 8 23.280 -19.864 -53.115 1.00 42.52 P
ATOM 3 OP1 A A 8 24.146 -18.903 -52.387 1.00 40.65 O
ATOM 4 OP2 A A 8 22.447 -20.808 -52.332 1.00 44.64 O
ATOM 5 O5' A A 8 22.375 -19.087 -54.168 1.00 40.79 O
ATOM 6 C5' A A 8 21.733 -19.781 -55.228 1.00 44.06 C
ATOM 7 C4' A A 8 21.280 -18.838 -56.315 1.00 42.53 C
ATOM 8 O4' A A 8 22.391 -18.007 -56.734 1.00 42.34 O
ATOM 9 C3' A A 8 20.790 -19.487 -57.604 1.00 44.81 C
ATOM 10 O3' A A 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 11 C2' A A 8 21.021 -18.396 -58.648 1.00 42.61 C
ATOM 12 O2' A A 8 19.939 -17.476 -58.662 1.00 40.42 O
ATOM 13 C1' A A 8 22.263 -17.682 -58.101 1.00 42.38 C
ATOM 14 N9 A A 8 23.501 -18.076 -58.804 1.00 41.05 N
ATOM 15 C8 A A 8 24.520 -17.227 -59.156 1.00 42.70 C
ATOM 16 N7 A A 8 25.521 -17.804 -59.772 1.00 36.43 N
ATOM 17 C5 A A 8 25.141 -19.133 -59.834 1.00 39.94 C
ATOM 18 C6 A A 8 25.785 -20.256 -60.375 1.00 42.15 C
ATOM 19 N6 A A 8 26.979 -20.200 -60.969 1.00 39.75 N
ATOM 20 N1 A A 8 25.152 -21.445 -60.281 1.00 43.33 N
ATOM 21 C2 A A 8 23.956 -21.483 -59.682 1.00 39.19 C
ATOM 22 N3 A A 8 23.251 -20.492 -59.137 1.00 40.61 N
ATOM 23 C4 A A 8 23.903 -19.322 -59.242 1.00 40.34 C
ATOM 24 P A A 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 25 OP1 A A 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 26 OP2 A A 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 27 O5' A A 9 19.302 -22.192 -58.587 1.00 47.17 O
TER
ATOM 1 O3' G B 30 34.964 -18.064 -65.687 1.00 52.44 O
ATOM 2 P G B 31 35.370 -18.545 -64.207 1.00 59.96 P
ATOM 3 OP1 G B 31 36.202 -17.472 -63.610 1.00 51.45 O
ATOM 4 OP2 G B 31 35.944 -19.907 -64.331 1.00 57.21 O
ATOM 5 O5' G B 31 33.966 -18.617 -63.462 1.00 53.72 O
ATOM 6 C5' G B 31 33.112 -17.484 -63.402 1.00 50.98 C
ATOM 7 C4' G B 31 31.900 -17.759 -62.554 1.00 49.95 C
ATOM 8 O4' G B 31 30.997 -18.653 -63.257 1.00 51.27 O
ATOM 9 C3' G B 31 32.167 -18.466 -61.239 1.00 50.80 C
ATOM 10 O3' G B 31 32.616 -17.588 -60.225 1.00 48.67 O
ATOM 11 C2' G B 31 30.831 -19.129 -60.936 1.00 49.93 C
ATOM 12 O2' G B 31 29.910 -18.185 -60.411 1.00 46.11 O
ATOM 13 C1' G B 31 30.371 -19.526 -62.339 1.00 47.67 C
ATOM 14 N9 G B 31 30.754 -20.910 -62.677 1.00 48.32 N
ATOM 15 C8 G B 31 32.011 -21.363 -63.000 1.00 50.26 C
ATOM 16 N7 G B 31 32.048 -22.641 -63.258 1.00 49.15 N
ATOM 17 C5 G B 31 30.734 -23.061 -63.099 1.00 48.43 C
ATOM 18 C6 G B 31 30.152 -24.348 -63.245 1.00 47.85 C
ATOM 19 O6 G B 31 30.696 -25.415 -63.556 1.00 47.54 O
ATOM 20 N1 G B 31 28.786 -24.324 -62.989 1.00 48.06 N
ATOM 21 C2 G B 31 28.068 -23.209 -62.637 1.00 44.05 C
ATOM 22 N2 G B 31 26.756 -23.390 -62.431 1.00 40.62 N
ATOM 23 N3 G B 31 28.595 -22.004 -62.498 1.00 45.48 N
ATOM 24 C4 G B 31 29.923 -22.003 -62.742 1.00 46.02 C
ATOM 25 P U B 32 33.789 -18.045 -59.231 1.00 53.46 P
ATOM 26 OP1 U B 32 34.074 -16.900 -58.335 1.00 55.10 O
ATOM 27 OP2 U B 32 34.887 -18.588 -60.066 1.00 49.46 O
ATOM 28 O5' U B 32 33.104 -19.219 -58.408 1.00 52.95 O
TER
ATOM 2 P A A 8 23.280 -19.864 -53.115 1.00 42.52 P
ATOM 3 OP1 A A 8 24.146 -18.903 -52.387 1.00 40.65 O
ATOM 4 OP2 A A 8 22.447 -20.808 -52.332 1.00 44.64 O
ATOM 5 O5' A A 8 22.375 -19.087 -54.168 1.00 40.79 O
ATOM 6 C5' A A 8 21.733 -19.781 -55.228 1.00 44.06 C
ATOM 7 C4' A A 8 21.280 -18.838 -56.315 1.00 42.53 C
ATOM 8 O4' A A 8 22.391 -18.007 -56.734 1.00 42.34 O
ATOM 9 C3' A A 8 20.790 -19.487 -57.604 1.00 44.81 C
ATOM 10 O3' A A 8 19.438 -19.919 -57.530 1.00 43.12 O
ATOM 11 C2' A A 8 21.021 -18.396 -58.648 1.00 42.61 C
ATOM 12 O2' A A 8 19.939 -17.476 -58.662 1.00 40.42 O
ATOM 13 C1' A A 8 22.263 -17.682 -58.101 1.00 42.38 C
ATOM 14 N9 A A 8 23.501 -18.076 -58.804 1.00 41.05 N
ATOM 15 C8 A A 8 24.520 -17.227 -59.156 1.00 42.70 C
ATOM 16 N7 A A 8 25.521 -17.804 -59.772 1.00 36.43 N
ATOM 17 C5 A A 8 25.141 -19.133 -59.834 1.00 39.94 C
ATOM 18 C6 A A 8 25.785 -20.256 -60.375 1.00 42.15 C
ATOM 19 N6 A A 8 26.979 -20.200 -60.969 1.00 39.75 N
ATOM 20 N1 A A 8 25.152 -21.445 -60.281 1.00 43.33 N
ATOM 21 C2 A A 8 23.956 -21.483 -59.682 1.00 39.19 C
ATOM 22 N3 A A 8 23.251 -20.492 -59.137 1.00 40.61 N
ATOM 23 C4 A A 8 23.903 -19.322 -59.242 1.00 40.34 C
ATOM 24 P A A 9 19.080 -21.454 -57.193 1.00 37.48 P
ATOM 25 OP1 A A 9 17.643 -21.494 -56.828 1.00 32.66 O
ATOM 26 OP2 A A 9 20.078 -21.932 -56.208 1.00 45.59 O
ATOM 27 O5' A A 9 19.302 -22.192 -58.587 1.00 47.17 O
TER
ATOM 1 O3' G B 30 34.964 -18.064 -65.687 1.00 52.44 O
ATOM 2 P G B 31 35.370 -18.545 -64.207 1.00 59.96 P
ATOM 3 OP1 G B 31 36.202 -17.472 -63.610 1.00 51.45 O
ATOM 4 OP2 G B 31 35.944 -19.907 -64.331 1.00 57.21 O
ATOM 5 O5' G B 31 33.966 -18.617 -63.462 1.00 53.72 O
ATOM 6 C5' G B 31 33.112 -17.484 -63.402 1.00 50.98 C
ATOM 7 C4' G B 31 31.900 -17.759 -62.554 1.00 49.95 C
ATOM 8 O4' G B 31 30.997 -18.653 -63.257 1.00 51.27 O
ATOM 9 C3' G B 31 32.167 -18.466 -61.239 1.00 50.80 C
ATOM 10 O3' G B 31 32.616 -17.588 -60.225 1.00 48.67 O
ATOM 11 C2' G B 31 30.831 -19.129 -60.936 1.00 49.93 C
ATOM 12 O2' G B 31 29.910 -18.185 -60.411 1.00 46.11 O
ATOM 13 C1' G B 31 30.371 -19.526 -62.339 1.00 47.67 C
ATOM 14 N9 G B 31 30.754 -20.910 -62.677 1.00 48.32 N
ATOM 15 C8 G B 31 32.011 -21.363 -63.000 1.00 50.26 C
ATOM 16 N7 G B 31 32.048 -22.641 -63.258 1.00 49.15 N
ATOM 17 C5 G B 31 30.734 -23.061 -63.099 1.00 48.43 C
ATOM 18 C6 G B 31 30.152 -24.348 -63.245 1.00 47.85 C
ATOM 19 O6 G B 31 30.696 -25.415 -63.556 1.00 47.54 O
ATOM 20 N1 G B 31 28.786 -24.324 -62.989 1.00 48.06 N
ATOM 21 C2 G B 31 28.068 -23.209 -62.637 1.00 44.05 C
ATOM 22 N2 G B 31 26.756 -23.390 -62.431 1.00 40.62 N
ATOM 23 N3 G B 31 28.595 -22.004 -62.498 1.00 45.48 N
ATOM 24 C4 G B 31 29.923 -22.003 -62.742 1.00 46.02 C
ATOM 25 P U B 32 33.789 -18.045 -59.231 1.00 53.46 P
ATOM 26 OP1 U B 32 34.074 -16.900 -58.335 1.00 55.10 O
ATOM 27 OP2 U B 32 34.887 -18.588 -60.066 1.00 49.46 O
ATOM 28 O5' U B 32 33.104 -19.219 -58.408 1.00 52.95 O
TER
Atoms:
OP1: (24.146,-18.903,-52.387)
OP2: (22.447,-20.808,-52.332)
C3': (20.790,-19.487,-57.604)
C1': (22.263,-17.682,-58.101)
C5': (21.733,-19.781,-55.228)
O4': (22.391,-18.007,-56.734)
C8: (24.520,-17.227,-59.156)
O2': (19.939,-17.476,-58.662)
C6: (25.785,-20.256,-60.375)
C5: (25.141,-19.133,-59.834)
C4: (23.903,-19.322,-59.242)
P: (23.280,-19.864,-53.115)
C4': (21.280,-18.838,-56.315)
C2': (21.021,-18.396,-58.648)
C2: (23.956,-21.483,-59.682)
N1: (25.152,-21.445,-60.281)
N3: (23.251,-20.492,-59.137)
N6: (26.979,-20.200,-60.969)
N7: (25.521,-17.804,-59.772)
N9: (23.501,-18.076,-58.804)
O5': (22.375,-19.087,-54.168)
O3': (19.438,-19.919,-57.530)
OP2: (22.447,-20.808,-52.332)
C3': (20.790,-19.487,-57.604)
C1': (22.263,-17.682,-58.101)
C5': (21.733,-19.781,-55.228)
O4': (22.391,-18.007,-56.734)
C8: (24.520,-17.227,-59.156)
O2': (19.939,-17.476,-58.662)
C6: (25.785,-20.256,-60.375)
C5: (25.141,-19.133,-59.834)
C4: (23.903,-19.322,-59.242)
P: (23.280,-19.864,-53.115)
C4': (21.280,-18.838,-56.315)
C2': (21.021,-18.396,-58.648)
C2: (23.956,-21.483,-59.682)
N1: (25.152,-21.445,-60.281)
N3: (23.251,-20.492,-59.137)
N6: (26.979,-20.200,-60.969)
N7: (25.521,-17.804,-59.772)
N9: (23.501,-18.076,-58.804)
O5': (22.375,-19.087,-54.168)
O3': (19.438,-19.919,-57.530)
OP1: (36.202,-17.472,-63.610)
OP2: (35.944,-19.907,-64.331)
C3': (32.167,-18.466,-61.239)
C1': (30.371,-19.526,-62.339)
C5': (33.112,-17.484,-63.402)
O6: (30.696,-25.415,-63.556)
O4': (30.997,-18.653,-63.257)
C8: (32.011,-21.363,-63.000)
C2: (28.068,-23.209,-62.637)
C6: (30.152,-24.348,-63.245)
C5: (30.734,-23.061,-63.099)
C4: (29.923,-22.003,-62.742)
P: (35.370,-18.545,-64.207)
C4': (31.900,-17.759,-62.554)
C2': (30.831,-19.129,-60.936)
O2': (29.910,-18.185,-60.411)
N1: (28.786,-24.324,-62.989)
N2: (26.756,-23.390,-62.431)
N3: (28.595,-22.004,-62.498)
N7: (32.048,-22.641,-63.258)
N9: (30.754,-20.910,-62.677)
O5': (33.966,-18.617,-63.462)
O3': (32.616,-17.588,-60.225)
OP2: (35.944,-19.907,-64.331)
C3': (32.167,-18.466,-61.239)
C1': (30.371,-19.526,-62.339)
C5': (33.112,-17.484,-63.402)
O6: (30.696,-25.415,-63.556)
O4': (30.997,-18.653,-63.257)
C8: (32.011,-21.363,-63.000)
C2: (28.068,-23.209,-62.637)
C6: (30.152,-24.348,-63.245)
C5: (30.734,-23.061,-63.099)
C4: (29.923,-22.003,-62.742)
P: (35.370,-18.545,-64.207)
C4': (31.900,-17.759,-62.554)
C2': (30.831,-19.129,-60.936)
O2': (29.910,-18.185,-60.411)
N1: (28.786,-24.324,-62.989)
N2: (26.756,-23.390,-62.431)
N3: (28.595,-22.004,-62.498)
N7: (32.048,-22.641,-63.258)
N9: (30.754,-20.910,-62.677)
O5': (33.966,-18.617,-63.462)
O3': (32.616,-17.588,-60.225)
Image (generated by PyMOL):