ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A693:A786

Extra

PDB:
ATOM 1 O3' G A 692 -49.080 -46.796 33.958 1.00 0.79 O
ATOM 2 P A A 693 -48.314 -45.404 33.880 1.00 1.06 P
ATOM 3 OP1 A A 693 -47.001 -45.586 33.230 1.00 1.06 O
ATOM 4 OP2 A A 693 -48.382 -44.823 35.249 1.00 1.06 O
ATOM 5 O5' A A 693 -49.216 -44.525 32.910 1.00 1.27 O
ATOM 6 C5' A A 693 -49.358 -44.884 31.544 1.00 1.27 C
ATOM 7 C4' A A 693 -49.064 -43.708 30.648 1.00 1.27 C
ATOM 8 O4' A A 693 -50.264 -42.915 30.456 1.00 1.27 O
ATOM 9 C3' A A 693 -47.952 -42.756 31.077 1.00 1.27 C
ATOM 10 O3' A A 693 -47.092 -42.398 30.005 1.00 1.27 O
ATOM 11 C2' A A 693 -48.715 -41.504 31.481 1.00 1.27 C
ATOM 12 O2' A A 693 -47.973 -40.348 31.192 1.00 1.27 O
ATOM 13 C1' A A 693 -49.927 -41.556 30.558 1.00 1.27 C
ATOM 14 N9 A A 693 -51.079 -40.803 31.042 1.00 0.79 N
ATOM 15 C8 A A 693 -51.251 -40.228 32.263 1.00 0.79 C
ATOM 16 N7 A A 693 -52.373 -39.570 32.380 1.00 0.79 N
ATOM 17 C5 A A 693 -52.983 -39.728 31.151 1.00 0.79 C
ATOM 18 C6 A A 693 -54.196 -39.258 30.635 1.00 0.79 C
ATOM 19 N6 A A 693 -55.023 -38.470 31.308 1.00 0.79 N
ATOM 20 N1 A A 693 -54.532 -39.618 29.384 1.00 0.79 N
ATOM 21 C2 A A 693 -53.687 -40.379 28.704 1.00 0.79 C
ATOM 22 N3 A A 693 -52.503 -40.865 29.072 1.00 0.79 N
ATOM 23 C4 A A 693 -52.209 -40.499 30.324 1.00 0.79 C
ATOM 24 P G A 694 -45.570 -42.913 30.022 1.00 9.70 P
ATOM 25 OP1 G A 694 -45.015 -42.655 31.367 1.00 9.70 O
ATOM 26 OP2 G A 694 -44.821 -42.439 28.821 1.00 9.70 O
ATOM 27 O5' G A 694 -45.782 -44.478 29.850 1.00 6.45 O
TER

ATOM 1 O3' A B 785 -61.444 -33.983 36.611 1.00 3.57 O
ATOM 2 P G B 786 -61.095 -33.102 35.331 1.00 10.40 P
ATOM 3 OP1 G B 786 -60.684 -31.766 35.806 1.00 15.95 O
ATOM 4 OP2 G B 786 -62.210 -33.222 34.362 1.00 15.45 O
ATOM 5 O5' G B 786 -59.789 -33.802 34.748 1.00 0.79 O
ATOM 6 C5' G B 786 -58.549 -33.752 35.470 1.00 0.79 C
ATOM 7 C4' G B 786 -57.508 -34.553 34.754 1.00 0.79 C
ATOM 8 O4' G B 786 -58.125 -35.813 34.422 1.00 0.79 O
ATOM 9 C3' G B 786 -57.054 -33.997 33.417 1.00 0.79 C
ATOM 10 O3' G B 786 -55.961 -33.105 33.558 1.00 0.79 O
ATOM 11 C2' G B 786 -56.642 -35.246 32.661 1.00 0.79 C
ATOM 12 O2' G B 786 -55.366 -35.680 33.054 1.00 0.79 O
ATOM 13 C1' G B 786 -57.653 -36.262 33.178 1.00 0.79 C
ATOM 14 N9 G B 786 -58.784 -36.478 32.281 1.00 0.79 N
ATOM 15 C8 G B 786 -60.116 -36.228 32.501 1.00 0.79 C
ATOM 16 N7 G B 786 -60.874 -36.589 31.499 1.00 0.79 N
ATOM 17 C5 G B 786 -59.984 -37.094 30.567 1.00 0.79 C
ATOM 18 C6 G B 786 -60.206 -37.646 29.309 1.00 0.79 C
ATOM 19 O6 G B 786 -61.273 -37.808 28.720 1.00 0.79 O
ATOM 20 N1 G B 786 -59.026 -38.044 28.709 1.00 0.79 N
ATOM 21 C2 G B 786 -57.786 -37.924 29.254 1.00 0.79 C
ATOM 22 N2 G B 786 -56.760 -38.392 28.538 1.00 0.79 N
ATOM 23 N3 G B 786 -57.560 -37.396 30.422 1.00 0.79 N
ATOM 24 C4 G B 786 -58.696 -37.014 31.027 1.00 0.79 C
ATOM 25 P U B 787 -55.964 -31.720 32.744 1.00 0.79 P
ATOM 26 OP1 U B 787 -54.728 -30.979 33.097 1.00 0.79 O
ATOM 27 OP2 U B 787 -57.283 -31.107 32.988 1.00 0.79 O
ATOM 28 O5' U B 787 -55.898 -32.163 31.223 1.00 0.79 O
TER

Atoms:
OP1: (-47.001,-45.586,33.230)
OP2: (-48.382,-44.823,35.249)
C3': (-47.952,-42.756,31.077)
C1': (-49.927,-41.556,30.558)
C5': (-49.358,-44.884,31.544)
O4': (-50.264,-42.915,30.456)
C8: (-51.251,-40.228,32.263)
O2': (-47.973,-40.348,31.192)
C6: (-54.196,-39.258,30.635)
C5: (-52.983,-39.728,31.151)
C4: (-52.209,-40.499,30.324)
P: (-48.314,-45.404,33.880)
C4': (-49.064,-43.708,30.648)
C2': (-48.715,-41.504,31.481)
C2: (-53.687,-40.379,28.704)
N1: (-54.532,-39.618,29.384)
N3: (-52.503,-40.865,29.072)
N6: (-55.023,-38.470,31.308)
N7: (-52.373,-39.570,32.380)
N9: (-51.079,-40.803,31.042)
O5': (-49.216,-44.525,32.910)
O3': (-47.092,-42.398,30.005)
OP1: (-60.684,-31.766,35.806)
OP2: (-62.210,-33.222,34.362)
C3': (-57.054,-33.997,33.417)
C1': (-57.653,-36.262,33.178)
C5': (-58.549,-33.752,35.470)
O6: (-61.273,-37.808,28.720)
O4': (-58.125,-35.813,34.422)
C8: (-60.116,-36.228,32.501)
C2: (-57.786,-37.924,29.254)
C6: (-60.206,-37.646,29.309)
C5: (-59.984,-37.094,30.567)
C4: (-58.696,-37.014,31.027)
P: (-61.095,-33.102,35.331)
C4': (-57.508,-34.553,34.754)
C2': (-56.642,-35.246,32.661)
O2': (-55.366,-35.680,33.054)
N1: (-59.026,-38.044,28.709)
N2: (-56.760,-38.392,28.538)
N3: (-57.560,-37.396,30.422)
N7: (-60.874,-36.589,31.499)
N9: (-58.784,-36.478,32.281)
O5': (-59.789,-33.802,34.748)
O3': (-55.961,-33.105,33.558)
Image (generated by PyMOL):
PyMOL image
show in jmol