Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01011:02146
Extra
PDB:
ATOM 1 O3' C A1010 51.765 79.020 109.103 1.00 35.16 O
ATOM 2 P G A1011 52.465 79.799 110.323 1.00 36.18 P
ATOM 3 OP1 G A1011 53.715 79.059 110.646 1.00 31.61 O
ATOM 4 OP2 G A1011 51.421 79.986 111.367 1.00 37.91 O
ATOM 5 O5' G A1011 52.816 81.238 109.730 1.00 34.23 O
ATOM 6 C5' G A1011 54.146 81.556 109.272 1.00 34.97 C
ATOM 7 C4' G A1011 54.374 81.003 107.882 1.00 34.74 C
ATOM 8 O4' G A1011 53.531 81.685 106.917 1.00 36.30 O
ATOM 9 C3' G A1011 55.771 81.215 107.333 1.00 35.01 C
ATOM 10 O3' G A1011 56.672 80.254 107.865 1.00 35.77 O
ATOM 11 C2' G A1011 55.541 81.056 105.839 1.00 33.40 C
ATOM 12 O2' G A1011 55.315 79.712 105.491 1.00 32.30 O
ATOM 13 C1' G A1011 54.219 81.799 105.673 1.00 35.24 C
ATOM 14 N9 G A1011 54.387 83.221 105.378 1.00 36.56 N
ATOM 15 C8 G A1011 53.700 84.261 105.959 1.00 35.49 C
ATOM 16 N7 G A1011 54.054 85.430 105.501 1.00 35.38 N
ATOM 17 C5 G A1011 55.032 85.153 104.556 1.00 34.75 C
ATOM 18 C6 G A1011 55.780 86.028 103.730 1.00 33.36 C
ATOM 19 O6 G A1011 55.727 87.260 103.669 1.00 33.03 O
ATOM 20 N1 G A1011 56.667 85.333 102.918 1.00 33.18 N
ATOM 21 C2 G A1011 56.826 83.972 102.906 1.00 33.93 C
ATOM 22 N2 G A1011 57.743 83.498 102.051 1.00 32.02 N
ATOM 23 N3 G A1011 56.136 83.138 103.675 1.00 35.98 N
ATOM 24 C4 G A1011 55.258 83.794 104.469 1.00 36.14 C
ATOM 25 P G A1012 57.905 80.741 108.774 1.00 34.89 P
ATOM 26 OP1 G A1012 58.544 79.513 109.300 1.00 36.81 O
ATOM 27 OP2 G A1012 57.414 81.775 109.721 1.00 33.70 O
ATOM 28 O5' G A1012 58.911 81.403 107.730 1.00 36.13 O
TER
ATOM 1 O3' G B2145 59.400 77.637 104.518 1.00 31.91 O
ATOM 2 P A B2146 57.901 77.787 103.973 1.00 32.11 P
ATOM 3 OP1 A B2146 57.879 78.773 102.867 1.00 33.28 O
ATOM 4 OP2 A B2146 57.047 78.001 105.160 1.00 32.28 O
ATOM 5 O5' A B2146 57.566 76.371 103.329 1.00 33.73 O
ATOM 6 C5' A B2146 56.204 75.981 103.085 1.00 34.25 C
ATOM 7 C4' A B2146 56.117 75.142 101.834 1.00 36.88 C
ATOM 8 O4' A B2146 56.395 75.959 100.667 1.00 38.82 O
ATOM 9 C3' A B2146 57.063 73.950 101.747 1.00 36.35 C
ATOM 10 O3' A B2146 56.430 72.951 100.940 1.00 40.19 O
ATOM 11 C2' A B2146 58.232 74.538 100.959 1.00 37.35 C
ATOM 12 O2' A B2146 59.014 73.554 100.304 1.00 37.97 O
ATOM 13 C1' A B2146 57.475 75.400 99.947 1.00 37.50 C
ATOM 14 N9 A B2146 58.192 76.496 99.293 1.00 36.65 N
ATOM 15 C8 A B2146 58.478 77.733 99.808 1.00 36.41 C
ATOM 16 N7 A B2146 59.054 78.541 98.954 1.00 35.56 N
ATOM 17 C5 A B2146 59.176 77.779 97.805 1.00 35.87 C
ATOM 18 C6 A B2146 59.694 78.068 96.537 1.00 37.15 C
ATOM 19 N6 A B2146 60.192 79.255 96.199 1.00 36.17 N
ATOM 20 N1 A B2146 59.677 77.085 95.612 1.00 39.08 N
ATOM 21 C2 A B2146 59.155 75.899 95.949 1.00 36.84 C
ATOM 22 N3 A B2146 58.624 75.512 97.104 1.00 36.41 N
ATOM 23 C4 A B2146 58.667 76.510 98.003 1.00 36.32 C
ATOM 24 P A B2147 55.283 72.001 101.560 1.00 40.04 P
ATOM 25 OP1 A B2147 55.920 71.045 102.500 1.00 39.64 O
ATOM 26 OP2 A B2147 54.482 71.489 100.412 1.00 37.64 O
ATOM 27 O5' A B2147 54.353 72.988 102.391 1.00 38.24 O
TER
ATOM 2 P G A1011 52.465 79.799 110.323 1.00 36.18 P
ATOM 3 OP1 G A1011 53.715 79.059 110.646 1.00 31.61 O
ATOM 4 OP2 G A1011 51.421 79.986 111.367 1.00 37.91 O
ATOM 5 O5' G A1011 52.816 81.238 109.730 1.00 34.23 O
ATOM 6 C5' G A1011 54.146 81.556 109.272 1.00 34.97 C
ATOM 7 C4' G A1011 54.374 81.003 107.882 1.00 34.74 C
ATOM 8 O4' G A1011 53.531 81.685 106.917 1.00 36.30 O
ATOM 9 C3' G A1011 55.771 81.215 107.333 1.00 35.01 C
ATOM 10 O3' G A1011 56.672 80.254 107.865 1.00 35.77 O
ATOM 11 C2' G A1011 55.541 81.056 105.839 1.00 33.40 C
ATOM 12 O2' G A1011 55.315 79.712 105.491 1.00 32.30 O
ATOM 13 C1' G A1011 54.219 81.799 105.673 1.00 35.24 C
ATOM 14 N9 G A1011 54.387 83.221 105.378 1.00 36.56 N
ATOM 15 C8 G A1011 53.700 84.261 105.959 1.00 35.49 C
ATOM 16 N7 G A1011 54.054 85.430 105.501 1.00 35.38 N
ATOM 17 C5 G A1011 55.032 85.153 104.556 1.00 34.75 C
ATOM 18 C6 G A1011 55.780 86.028 103.730 1.00 33.36 C
ATOM 19 O6 G A1011 55.727 87.260 103.669 1.00 33.03 O
ATOM 20 N1 G A1011 56.667 85.333 102.918 1.00 33.18 N
ATOM 21 C2 G A1011 56.826 83.972 102.906 1.00 33.93 C
ATOM 22 N2 G A1011 57.743 83.498 102.051 1.00 32.02 N
ATOM 23 N3 G A1011 56.136 83.138 103.675 1.00 35.98 N
ATOM 24 C4 G A1011 55.258 83.794 104.469 1.00 36.14 C
ATOM 25 P G A1012 57.905 80.741 108.774 1.00 34.89 P
ATOM 26 OP1 G A1012 58.544 79.513 109.300 1.00 36.81 O
ATOM 27 OP2 G A1012 57.414 81.775 109.721 1.00 33.70 O
ATOM 28 O5' G A1012 58.911 81.403 107.730 1.00 36.13 O
TER
ATOM 1 O3' G B2145 59.400 77.637 104.518 1.00 31.91 O
ATOM 2 P A B2146 57.901 77.787 103.973 1.00 32.11 P
ATOM 3 OP1 A B2146 57.879 78.773 102.867 1.00 33.28 O
ATOM 4 OP2 A B2146 57.047 78.001 105.160 1.00 32.28 O
ATOM 5 O5' A B2146 57.566 76.371 103.329 1.00 33.73 O
ATOM 6 C5' A B2146 56.204 75.981 103.085 1.00 34.25 C
ATOM 7 C4' A B2146 56.117 75.142 101.834 1.00 36.88 C
ATOM 8 O4' A B2146 56.395 75.959 100.667 1.00 38.82 O
ATOM 9 C3' A B2146 57.063 73.950 101.747 1.00 36.35 C
ATOM 10 O3' A B2146 56.430 72.951 100.940 1.00 40.19 O
ATOM 11 C2' A B2146 58.232 74.538 100.959 1.00 37.35 C
ATOM 12 O2' A B2146 59.014 73.554 100.304 1.00 37.97 O
ATOM 13 C1' A B2146 57.475 75.400 99.947 1.00 37.50 C
ATOM 14 N9 A B2146 58.192 76.496 99.293 1.00 36.65 N
ATOM 15 C8 A B2146 58.478 77.733 99.808 1.00 36.41 C
ATOM 16 N7 A B2146 59.054 78.541 98.954 1.00 35.56 N
ATOM 17 C5 A B2146 59.176 77.779 97.805 1.00 35.87 C
ATOM 18 C6 A B2146 59.694 78.068 96.537 1.00 37.15 C
ATOM 19 N6 A B2146 60.192 79.255 96.199 1.00 36.17 N
ATOM 20 N1 A B2146 59.677 77.085 95.612 1.00 39.08 N
ATOM 21 C2 A B2146 59.155 75.899 95.949 1.00 36.84 C
ATOM 22 N3 A B2146 58.624 75.512 97.104 1.00 36.41 N
ATOM 23 C4 A B2146 58.667 76.510 98.003 1.00 36.32 C
ATOM 24 P A B2147 55.283 72.001 101.560 1.00 40.04 P
ATOM 25 OP1 A B2147 55.920 71.045 102.500 1.00 39.64 O
ATOM 26 OP2 A B2147 54.482 71.489 100.412 1.00 37.64 O
ATOM 27 O5' A B2147 54.353 72.988 102.391 1.00 38.24 O
TER
Atoms:
OP1: (53.715,79.059,110.646)
OP2: (51.421,79.986,111.367)
C3': (55.771,81.215,107.333)
C1': (54.219,81.799,105.673)
C5': (54.146,81.556,109.272)
O6: (55.727,87.260,103.669)
O4': (53.531,81.685,106.917)
C8: (53.700,84.261,105.959)
C2: (56.826,83.972,102.906)
C6: (55.780,86.028,103.730)
C5: (55.032,85.153,104.556)
C4: (55.258,83.794,104.469)
P: (52.465,79.799,110.323)
C4': (54.374,81.003,107.882)
C2': (55.541,81.056,105.839)
O2': (55.315,79.712,105.491)
N1: (56.667,85.333,102.918)
N2: (57.743,83.498,102.051)
N3: (56.136,83.138,103.675)
N7: (54.054,85.430,105.501)
N9: (54.387,83.221,105.378)
O5': (52.816,81.238,109.730)
O3': (56.672,80.254,107.865)
OP2: (51.421,79.986,111.367)
C3': (55.771,81.215,107.333)
C1': (54.219,81.799,105.673)
C5': (54.146,81.556,109.272)
O6: (55.727,87.260,103.669)
O4': (53.531,81.685,106.917)
C8: (53.700,84.261,105.959)
C2: (56.826,83.972,102.906)
C6: (55.780,86.028,103.730)
C5: (55.032,85.153,104.556)
C4: (55.258,83.794,104.469)
P: (52.465,79.799,110.323)
C4': (54.374,81.003,107.882)
C2': (55.541,81.056,105.839)
O2': (55.315,79.712,105.491)
N1: (56.667,85.333,102.918)
N2: (57.743,83.498,102.051)
N3: (56.136,83.138,103.675)
N7: (54.054,85.430,105.501)
N9: (54.387,83.221,105.378)
O5': (52.816,81.238,109.730)
O3': (56.672,80.254,107.865)
OP1: (57.879,78.773,102.867)
OP2: (57.047,78.001,105.160)
C3': (57.063,73.950,101.747)
C1': (57.475,75.400,99.947)
C5': (56.204,75.981,103.085)
O4': (56.395,75.959,100.667)
C8: (58.478,77.733,99.808)
O2': (59.014,73.554,100.304)
C6: (59.694,78.068,96.537)
C5: (59.176,77.779,97.805)
C4: (58.667,76.510,98.003)
P: (57.901,77.787,103.973)
C4': (56.117,75.142,101.834)
C2': (58.232,74.538,100.959)
C2: (59.155,75.899,95.949)
N1: (59.677,77.085,95.612)
N3: (58.624,75.512,97.104)
N6: (60.192,79.255,96.199)
N7: (59.054,78.541,98.954)
N9: (58.192,76.496,99.293)
O5': (57.566,76.371,103.329)
O3': (56.430,72.951,100.940)
OP2: (57.047,78.001,105.160)
C3': (57.063,73.950,101.747)
C1': (57.475,75.400,99.947)
C5': (56.204,75.981,103.085)
O4': (56.395,75.959,100.667)
C8: (58.478,77.733,99.808)
O2': (59.014,73.554,100.304)
C6: (59.694,78.068,96.537)
C5: (59.176,77.779,97.805)
C4: (58.667,76.510,98.003)
P: (57.901,77.787,103.973)
C4': (56.117,75.142,101.834)
C2': (58.232,74.538,100.959)
C2: (59.155,75.899,95.949)
N1: (59.677,77.085,95.612)
N3: (58.624,75.512,97.104)
N6: (60.192,79.255,96.199)
N7: (59.054,78.541,98.954)
N9: (58.192,76.496,99.293)
O5': (57.566,76.371,103.329)
O3': (56.430,72.951,100.940)
Image (generated by PyMOL):