ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01011:02146

Extra

PDB:
ATOM 1 O3' C A1010 51.883 79.124 109.483 1.00 37.55 O
ATOM 2 P G A1011 52.629 79.907 110.668 1.00 40.14 P
ATOM 3 OP1 G A1011 53.866 79.159 110.995 1.00 40.02 O
ATOM 4 OP2 G A1011 51.620 80.153 111.725 1.00 42.96 O
ATOM 5 O5' G A1011 53.013 81.311 110.015 1.00 39.01 O
ATOM 6 C5' G A1011 54.362 81.598 109.594 1.00 38.36 C
ATOM 7 C4' G A1011 54.606 81.077 108.196 1.00 37.16 C
ATOM 8 O4' G A1011 53.769 81.774 107.236 1.00 37.97 O
ATOM 9 C3' G A1011 56.008 81.322 107.680 1.00 37.98 C
ATOM 10 O3' G A1011 56.898 80.347 108.205 1.00 39.02 O
ATOM 11 C2' G A1011 55.808 81.214 106.173 1.00 36.78 C
ATOM 12 O2' G A1011 55.641 79.882 105.749 1.00 36.03 O
ATOM 13 C1' G A1011 54.467 81.924 106.006 1.00 36.70 C
ATOM 14 N9 G A1011 54.590 83.354 105.726 1.00 37.62 N
ATOM 15 C8 G A1011 53.882 84.367 106.321 1.00 35.56 C
ATOM 16 N7 G A1011 54.203 85.549 105.871 1.00 35.35 N
ATOM 17 C5 G A1011 55.181 85.305 104.920 1.00 36.09 C
ATOM 18 C6 G A1011 55.906 86.203 104.102 1.00 36.51 C
ATOM 19 O6 G A1011 55.837 87.430 104.062 1.00 39.77 O
ATOM 20 N1 G A1011 56.796 85.540 103.275 1.00 35.86 N
ATOM 21 C2 G A1011 56.982 84.191 103.244 1.00 37.10 C
ATOM 22 N2 G A1011 57.900 83.749 102.375 1.00 37.51 N
ATOM 23 N3 G A1011 56.319 83.335 104.008 1.00 38.91 N
ATOM 24 C4 G A1011 55.436 83.959 104.815 1.00 37.53 C
ATOM 25 P G A1012 58.129 80.805 109.126 1.00 37.61 P
ATOM 26 OP1 G A1012 58.723 79.559 109.635 1.00 37.10 O
ATOM 27 OP2 G A1012 57.682 81.851 110.078 1.00 35.59 O
ATOM 28 O5' G A1012 59.146 81.467 108.101 1.00 38.36 O
TER

ATOM 1 O3' G B2145 59.679 77.844 104.807 1.00 39.96 O
ATOM 2 P A B2146 58.157 77.978 104.304 1.00 41.28 P
ATOM 3 OP1 A B2146 58.104 79.063 103.304 1.00 42.12 O
ATOM 4 OP2 A B2146 57.307 78.060 105.508 1.00 42.50 O
ATOM 5 O5' A B2146 57.849 76.611 103.544 1.00 40.62 O
ATOM 6 C5' A B2146 56.487 76.138 103.389 1.00 41.31 C
ATOM 7 C4' A B2146 56.353 75.279 102.145 1.00 41.09 C
ATOM 8 O4' A B2146 56.615 76.082 100.965 1.00 40.27 O
ATOM 9 C3' A B2146 57.286 74.081 102.034 1.00 41.00 C
ATOM 10 O3' A B2146 56.656 73.115 101.183 1.00 44.29 O
ATOM 11 C2' A B2146 58.462 74.682 101.271 1.00 40.39 C
ATOM 12 O2' A B2146 59.270 73.711 100.633 1.00 41.92 O
ATOM 13 C1' A B2146 57.709 75.542 100.257 1.00 38.41 C
ATOM 14 N9 A B2146 58.424 76.654 99.637 1.00 37.12 N
ATOM 15 C8 A B2146 58.711 77.875 100.188 1.00 37.23 C
ATOM 16 N7 A B2146 59.292 78.701 99.359 1.00 36.88 N
ATOM 17 C5 A B2146 59.417 77.967 98.191 1.00 34.61 C
ATOM 18 C6 A B2146 59.955 78.278 96.947 1.00 34.49 C
ATOM 19 N6 A B2146 60.480 79.459 96.652 1.00 35.83 N
ATOM 20 N1 A B2146 59.938 77.322 95.997 1.00 35.27 N
ATOM 21 C2 A B2146 59.402 76.140 96.295 1.00 33.25 C
ATOM 22 N3 A B2146 58.859 75.730 97.430 1.00 33.49 N
ATOM 23 C4 A B2146 58.900 76.702 98.352 1.00 34.48 C
ATOM 24 P A B2147 55.552 72.100 101.771 1.00 45.15 P
ATOM 25 OP1 A B2147 56.253 71.109 102.633 1.00 45.31 O
ATOM 26 OP2 A B2147 54.741 71.625 100.628 1.00 43.18 O
ATOM 27 O5' A B2147 54.619 73.034 102.660 1.00 43.98 O
TER

Atoms:
OP1: (53.866,79.159,110.995)
OP2: (51.620,80.153,111.725)
C3': (56.008,81.322,107.680)
C1': (54.467,81.924,106.006)
C5': (54.362,81.598,109.594)
O6: (55.837,87.430,104.062)
O4': (53.769,81.774,107.236)
C8: (53.882,84.367,106.321)
C2: (56.982,84.191,103.244)
C6: (55.906,86.203,104.102)
C5: (55.181,85.305,104.920)
C4: (55.436,83.959,104.815)
P: (52.629,79.907,110.668)
C4': (54.606,81.077,108.196)
C2': (55.808,81.214,106.173)
O2': (55.641,79.882,105.749)
N1: (56.796,85.540,103.275)
N2: (57.900,83.749,102.375)
N3: (56.319,83.335,104.008)
N7: (54.203,85.549,105.871)
N9: (54.590,83.354,105.726)
O5': (53.013,81.311,110.015)
O3': (56.898,80.347,108.205)
OP1: (58.104,79.063,103.304)
OP2: (57.307,78.060,105.508)
C3': (57.286,74.081,102.034)
C1': (57.709,75.542,100.257)
C5': (56.487,76.138,103.389)
O4': (56.615,76.082,100.965)
C8: (58.711,77.875,100.188)
O2': (59.270,73.711,100.633)
C6: (59.955,78.278,96.947)
C5: (59.417,77.967,98.191)
C4: (58.900,76.702,98.352)
P: (58.157,77.978,104.304)
C4': (56.353,75.279,102.145)
C2': (58.462,74.682,101.271)
C2: (59.402,76.140,96.295)
N1: (59.938,77.322,95.997)
N3: (58.859,75.730,97.430)
N6: (60.480,79.459,96.652)
N7: (59.292,78.701,99.359)
N9: (58.424,76.654,99.637)
O5': (57.849,76.611,103.544)
O3': (56.656,73.115,101.183)
Image (generated by PyMOL):
PyMOL image
show in jmol