ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01011:02146

Extra

PDB:
ATOM 1 O3' C A1010 51.609 78.781 109.017 1.00 32.94 O
ATOM 2 P G A1011 52.330 79.567 110.213 1.00 32.61 P
ATOM 3 OP1 G A1011 53.575 78.814 110.514 1.00 32.15 O
ATOM 4 OP2 G A1011 51.330 79.808 111.284 1.00 33.28 O
ATOM 5 O5' G A1011 52.691 80.979 109.573 1.00 32.97 O
ATOM 6 C5' G A1011 54.023 81.266 109.130 1.00 33.03 C
ATOM 7 C4' G A1011 54.245 80.688 107.762 1.00 32.50 C
ATOM 8 O4' G A1011 53.369 81.342 106.811 1.00 32.35 O
ATOM 9 C3' G A1011 55.632 80.909 107.199 1.00 32.75 C
ATOM 10 O3' G A1011 56.528 79.935 107.717 1.00 34.02 O
ATOM 11 C2' G A1011 55.381 80.769 105.707 1.00 31.95 C
ATOM 12 O2' G A1011 55.198 79.425 105.326 1.00 31.38 O
ATOM 13 C1' G A1011 54.034 81.482 105.569 1.00 31.72 C
ATOM 14 N9 G A1011 54.159 82.909 105.296 1.00 32.84 N
ATOM 15 C8 G A1011 53.417 83.921 105.857 1.00 32.08 C
ATOM 16 N7 G A1011 53.757 85.105 105.427 1.00 32.44 N
ATOM 17 C5 G A1011 54.785 84.864 104.526 1.00 32.26 C
ATOM 18 C6 G A1011 55.542 85.763 103.738 1.00 31.41 C
ATOM 19 O6 G A1011 55.455 86.991 103.677 1.00 32.82 O
ATOM 20 N1 G A1011 56.480 85.097 102.959 1.00 31.87 N
ATOM 21 C2 G A1011 56.665 83.738 102.932 1.00 32.87 C
ATOM 22 N2 G A1011 57.617 83.284 102.098 1.00 32.27 N
ATOM 23 N3 G A1011 55.965 82.884 103.663 1.00 33.65 N
ATOM 24 C4 G A1011 55.047 83.513 104.432 1.00 33.56 C
ATOM 25 P G A1012 57.773 80.399 108.624 1.00 35.41 P
ATOM 26 OP1 G A1012 58.386 79.156 109.136 1.00 35.09 O
ATOM 27 OP2 G A1012 57.341 81.449 109.583 1.00 35.04 O
ATOM 28 O5' G A1012 58.787 81.057 107.585 1.00 34.81 O
TER

ATOM 1 O3' G B2145 59.248 77.390 104.400 1.00 30.81 O
ATOM 2 P A B2146 57.730 77.546 103.896 1.00 31.82 P
ATOM 3 OP1 A B2146 57.703 78.532 102.790 1.00 32.62 O
ATOM 4 OP2 A B2146 56.908 77.774 105.098 1.00 30.31 O
ATOM 5 O5' A B2146 57.356 76.131 103.272 1.00 31.21 O
ATOM 6 C5' A B2146 55.996 75.809 102.944 1.00 32.35 C
ATOM 7 C4' A B2146 55.941 74.966 101.689 1.00 35.17 C
ATOM 8 O4' A B2146 56.240 75.771 100.515 1.00 35.50 O
ATOM 9 C3' A B2146 56.893 73.778 101.634 1.00 34.68 C
ATOM 10 O3' A B2146 56.299 72.765 100.811 1.00 38.37 O
ATOM 11 C2' A B2146 58.078 74.375 100.880 1.00 34.44 C
ATOM 12 O2' A B2146 58.908 73.394 100.291 1.00 32.50 O
ATOM 13 C1' A B2146 57.340 75.210 99.829 1.00 35.05 C
ATOM 14 N9 A B2146 58.076 76.297 99.177 1.00 35.13 N
ATOM 15 C8 A B2146 58.364 77.536 99.689 1.00 35.65 C
ATOM 16 N7 A B2146 58.994 78.320 98.853 1.00 36.24 N
ATOM 17 C5 A B2146 59.143 77.544 97.714 1.00 35.43 C
ATOM 18 C6 A B2146 59.733 77.804 96.467 1.00 35.41 C
ATOM 19 N6 A B2146 60.296 78.963 96.149 1.00 35.34 N
ATOM 20 N1 A B2146 59.726 76.817 95.548 1.00 35.30 N
ATOM 21 C2 A B2146 59.160 75.652 95.871 1.00 34.37 C
ATOM 22 N3 A B2146 58.568 75.288 97.007 1.00 34.92 N
ATOM 23 C4 A B2146 58.594 76.292 97.901 1.00 34.85 C
ATOM 24 P A B2147 55.178 71.774 101.413 1.00 39.27 P
ATOM 25 OP1 A B2147 55.844 70.825 102.345 1.00 38.25 O
ATOM 26 OP2 A B2147 54.398 71.245 100.261 1.00 36.47 O
ATOM 27 O5' A B2147 54.230 72.736 102.252 1.00 36.19 O
TER

Atoms:
OP1: (53.575,78.814,110.514)
OP2: (51.330,79.808,111.284)
C3': (55.632,80.909,107.199)
C1': (54.034,81.482,105.569)
C5': (54.023,81.266,109.130)
O6: (55.455,86.991,103.677)
O4': (53.369,81.342,106.811)
C8: (53.417,83.921,105.857)
C2: (56.665,83.738,102.932)
C6: (55.542,85.763,103.738)
C5: (54.785,84.864,104.526)
C4: (55.047,83.513,104.432)
P: (52.330,79.567,110.213)
C4': (54.245,80.688,107.762)
C2': (55.381,80.769,105.707)
O2': (55.198,79.425,105.326)
N1: (56.480,85.097,102.959)
N2: (57.617,83.284,102.098)
N3: (55.965,82.884,103.663)
N7: (53.757,85.105,105.427)
N9: (54.159,82.909,105.296)
O5': (52.691,80.979,109.573)
O3': (56.528,79.935,107.717)
OP1: (57.703,78.532,102.790)
OP2: (56.908,77.774,105.098)
C3': (56.893,73.778,101.634)
C1': (57.340,75.210,99.829)
C5': (55.996,75.809,102.944)
O4': (56.240,75.771,100.515)
C8: (58.364,77.536,99.689)
O2': (58.908,73.394,100.291)
C6: (59.733,77.804,96.467)
C5: (59.143,77.544,97.714)
C4: (58.594,76.292,97.901)
P: (57.730,77.546,103.896)
C4': (55.941,74.966,101.689)
C2': (58.078,74.375,100.880)
C2: (59.160,75.652,95.871)
N1: (59.726,76.817,95.548)
N3: (58.568,75.288,97.007)
N6: (60.296,78.963,96.149)
N7: (58.994,78.320,98.853)
N9: (58.076,76.297,99.177)
O5': (57.356,76.131,103.272)
O3': (56.299,72.765,100.811)
Image (generated by PyMOL):
PyMOL image
show in jmol