ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0186:0404

Extra

PDB:
ATOM 1 O3' C A 185 63.469 81.611 25.133 1.00 54.38 O
ATOM 2 P A A 186 63.049 80.421 24.119 1.00 58.56 P
ATOM 3 OP1 A A 186 61.614 80.547 23.722 1.00 54.52 O
ATOM 4 OP2 A A 186 63.529 79.170 24.775 1.00 57.27 O
ATOM 5 O5' A A 186 63.928 80.643 22.806 1.00 55.66 O
ATOM 6 C5' A A 186 65.249 81.199 22.882 1.00 54.96 C
ATOM 7 C4' A A 186 66.236 80.339 22.128 1.00 52.68 C
ATOM 8 O4' A A 186 67.446 81.117 21.919 1.00 53.03 O
ATOM 9 C3' A A 186 66.681 79.047 22.819 1.00 52.46 C
ATOM 10 O3' A A 186 67.086 78.087 21.834 1.00 55.22 O
ATOM 11 C2' A A 186 67.957 79.501 23.518 1.00 52.89 C
ATOM 12 O2' A A 186 68.856 78.457 23.831 1.00 51.85 O
ATOM 13 C1' A A 186 68.546 80.404 22.437 1.00 53.22 C
ATOM 14 N9 A A 186 69.577 81.349 22.859 1.00 53.21 N
ATOM 15 C8 A A 186 69.565 82.227 23.913 1.00 53.22 C
ATOM 16 N7 A A 186 70.673 82.915 24.035 1.00 53.81 N
ATOM 17 C5 A A 186 71.464 82.467 22.988 1.00 52.84 C
ATOM 18 C6 A A 186 72.762 82.804 22.572 1.00 53.25 C
ATOM 19 N6 A A 186 73.530 83.698 23.196 1.00 54.81 N
ATOM 20 N1 A A 186 73.252 82.180 21.480 1.00 52.77 N
ATOM 21 C2 A A 186 72.485 81.277 20.861 1.00 51.88 C
ATOM 22 N3 A A 186 71.257 80.870 21.161 1.00 52.20 N
ATOM 23 C4 A A 186 70.798 81.511 22.249 1.00 52.71 C
ATOM 24 P A A 187 66.055 76.978 21.293 1.00 54.49 P
ATOM 25 OP1 A A 187 64.919 76.825 22.235 1.00 55.39 O
ATOM 26 OP2 A A 187 66.886 75.804 20.949 1.00 55.13 O
ATOM 27 O5' A A 187 65.489 77.601 19.943 1.00 54.08 O
TER

ATOM 1 O3' A B 403 79.105 90.440 26.419 1.00 43.55 O
ATOM 2 P G B 404 78.917 89.240 27.468 1.00 44.42 P
ATOM 3 OP1 G B 404 78.372 89.857 28.712 1.00 43.28 O
ATOM 4 OP2 G B 404 80.190 88.461 27.521 1.00 41.53 O
ATOM 5 O5' G B 404 77.777 88.333 26.826 1.00 41.71 O
ATOM 6 C5' G B 404 76.432 88.828 26.691 1.00 42.79 C
ATOM 7 C4' G B 404 75.544 87.769 26.083 1.00 43.79 C
ATOM 8 O4' G B 404 75.918 87.530 24.705 1.00 44.46 O
ATOM 9 C3' G B 404 75.623 86.413 26.758 1.00 44.12 C
ATOM 10 O3' G B 404 74.729 86.407 27.873 1.00 45.00 O
ATOM 11 C2' G B 404 75.195 85.459 25.643 1.00 43.59 C
ATOM 12 O2' G B 404 73.787 85.357 25.495 1.00 45.22 O
ATOM 13 C1' G B 404 75.768 86.155 24.402 1.00 43.00 C
ATOM 14 N9 G B 404 77.055 85.651 23.928 1.00 42.57 N
ATOM 15 C8 G B 404 78.307 86.098 24.282 1.00 39.53 C
ATOM 16 N7 G B 404 79.270 85.450 23.685 1.00 38.87 N
ATOM 17 C5 G B 404 78.617 84.519 22.889 1.00 41.09 C
ATOM 18 C6 G B 404 79.139 83.527 22.019 1.00 42.71 C
ATOM 19 O6 G B 404 80.324 83.272 21.760 1.00 45.89 O
ATOM 20 N1 G B 404 78.126 82.788 21.419 1.00 43.55 N
ATOM 21 C2 G B 404 76.782 82.978 21.627 1.00 44.94 C
ATOM 22 N2 G B 404 75.960 82.144 20.977 1.00 44.69 N
ATOM 23 N3 G B 404 76.280 83.911 22.423 1.00 43.72 N
ATOM 24 C4 G B 404 77.249 84.633 23.024 1.00 42.54 C
ATOM 25 P G B 405 75.245 85.946 29.320 1.00 44.49 P
ATOM 26 OP1 G B 405 76.264 84.873 29.144 1.00 46.67 O
ATOM 27 OP2 G B 405 74.026 85.697 30.129 1.00 44.74 O
ATOM 28 O5' G B 405 75.969 87.213 29.940 1.00 42.68 O
TER

Atoms:
OP1: (61.614,80.547,23.722)
OP2: (63.529,79.170,24.775)
C3': (66.681,79.047,22.819)
C1': (68.546,80.404,22.437)
C5': (65.249,81.199,22.882)
O4': (67.446,81.117,21.919)
C8: (69.565,82.227,23.913)
O2': (68.856,78.457,23.831)
C6: (72.762,82.804,22.572)
C5: (71.464,82.467,22.988)
C4: (70.798,81.511,22.249)
P: (63.049,80.421,24.119)
C4': (66.236,80.339,22.128)
C2': (67.957,79.501,23.518)
C2: (72.485,81.277,20.861)
N1: (73.252,82.180,21.480)
N3: (71.257,80.870,21.161)
N6: (73.530,83.698,23.196)
N7: (70.673,82.915,24.035)
N9: (69.577,81.349,22.859)
O5': (63.928,80.643,22.806)
O3': (67.086,78.087,21.834)
OP1: (78.372,89.857,28.712)
OP2: (80.190,88.461,27.521)
C3': (75.623,86.413,26.758)
C1': (75.768,86.155,24.402)
C5': (76.432,88.828,26.691)
O6: (80.324,83.272,21.760)
O4': (75.918,87.530,24.705)
C8: (78.307,86.098,24.282)
C2: (76.782,82.978,21.627)
C6: (79.139,83.527,22.019)
C5: (78.617,84.519,22.889)
C4: (77.249,84.633,23.024)
P: (78.917,89.240,27.468)
C4': (75.544,87.769,26.083)
C2': (75.195,85.459,25.643)
O2': (73.787,85.357,25.495)
N1: (78.126,82.788,21.419)
N2: (75.960,82.144,20.977)
N3: (76.280,83.911,22.423)
N7: (79.270,85.450,23.685)
N9: (77.055,85.651,23.928)
O5': (77.777,88.333,26.826)
O3': (74.729,86.407,27.873)
Image (generated by PyMOL):
PyMOL image
show in jmol