ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0863:0860

Extra

PDB:
ATOM 1 O3' A A 862 94.785 130.247 82.625 1.00 33.68 O
ATOM 2 P A A 863 94.308 130.267 84.154 1.00 36.60 P
ATOM 3 OP1 A A 863 95.270 131.078 84.927 1.00 36.09 O
ATOM 4 OP2 A A 863 94.033 128.870 84.568 1.00 35.49 O
ATOM 5 O5' A A 863 92.932 131.065 84.074 1.00 36.28 O
ATOM 6 C5' A A 863 91.999 131.067 85.166 1.00 34.81 C
ATOM 7 C4' A A 863 90.600 131.357 84.662 1.00 34.05 C
ATOM 8 O4' A A 863 90.588 132.619 83.932 1.00 34.51 O
ATOM 9 C3' A A 863 90.034 130.392 83.638 1.00 33.11 C
ATOM 10 O3' A A 863 89.586 129.178 84.219 1.00 31.55 O
ATOM 11 C2' A A 863 88.901 131.214 83.031 1.00 32.33 C
ATOM 12 O2' A A 863 87.753 131.282 83.850 1.00 30.87 O
ATOM 13 C1' A A 863 89.546 132.599 82.964 1.00 31.11 C
ATOM 14 N9 A A 863 90.110 132.951 81.657 1.00 28.93 N
ATOM 15 C8 A A 863 90.436 134.208 81.227 1.00 29.13 C
ATOM 16 N7 A A 863 90.896 134.247 80.000 1.00 28.13 N
ATOM 17 C5 A A 863 90.880 132.924 79.598 1.00 27.08 C
ATOM 18 C6 A A 863 91.256 132.300 78.401 1.00 28.53 C
ATOM 19 N6 A A 863 91.735 132.953 77.341 1.00 28.26 N
ATOM 20 N1 A A 863 91.123 130.960 78.326 1.00 29.04 N
ATOM 21 C2 A A 863 90.645 130.306 79.388 1.00 28.13 C
ATOM 22 N3 A A 863 90.261 130.781 80.566 1.00 27.40 N
ATOM 23 C4 A A 863 90.405 132.112 80.609 1.00 27.18 C
ATOM 24 P G A 864 89.935 127.789 83.498 1.00 31.17 P
ATOM 25 OP1 G A 864 89.249 126.729 84.262 1.00 29.29 O
ATOM 26 OP2 G A 864 91.398 127.716 83.288 1.00 28.98 O
ATOM 27 O5' G A 864 89.254 127.907 82.066 1.00 28.30 O
TER

ATOM 1 O3' U B 859 94.989 136.941 69.286 1.00 35.25 O
ATOM 2 P G B 860 96.214 136.366 70.164 1.00 36.57 P
ATOM 3 OP1 G B 860 97.173 137.473 70.412 1.00 35.62 O
ATOM 4 OP2 G B 860 96.689 135.117 69.532 1.00 34.41 O
ATOM 5 O5' G B 860 95.549 135.979 71.559 1.00 35.46 O
ATOM 6 C5' G B 860 94.938 136.973 72.396 1.00 32.87 C
ATOM 7 C4' G B 860 94.358 136.322 73.629 1.00 34.62 C
ATOM 8 O4' G B 860 93.352 135.360 73.229 1.00 33.10 O
ATOM 9 C3' G B 860 95.336 135.515 74.469 1.00 35.39 C
ATOM 10 O3' G B 860 96.038 136.349 75.400 1.00 36.37 O
ATOM 11 C2' G B 860 94.405 134.551 75.194 1.00 34.67 C
ATOM 12 O2' G B 860 93.723 135.174 76.264 1.00 36.81 O
ATOM 13 C1' G B 860 93.376 134.249 74.106 1.00 33.76 C
ATOM 14 N9 G B 860 93.652 133.055 73.314 1.00 34.08 N
ATOM 15 C8 G B 860 94.310 133.000 72.109 1.00 35.06 C
ATOM 16 N7 G B 860 94.359 131.798 71.605 1.00 34.69 N
ATOM 17 C5 G B 860 93.704 131.007 72.538 1.00 34.09 C
ATOM 18 C6 G B 860 93.437 129.619 72.531 1.00 34.22 C
ATOM 19 O6 G B 860 93.714 128.787 71.659 1.00 33.62 O
ATOM 20 N1 G B 860 92.765 129.223 73.681 1.00 33.73 N
ATOM 21 C2 G B 860 92.388 130.054 74.697 1.00 32.85 C
ATOM 22 N2 G B 860 91.758 129.477 75.715 1.00 32.66 N
ATOM 23 N3 G B 860 92.615 131.354 74.712 1.00 33.41 N
ATOM 24 C4 G B 860 93.276 131.762 73.608 1.00 33.53 C
ATOM 25 P A B 861 97.490 136.938 75.031 1.00 33.88 P
ATOM 26 OP1 A B 861 97.298 138.338 74.591 1.00 33.63 O
ATOM 27 OP2 A B 861 98.202 135.986 74.143 1.00 33.68 O
ATOM 28 O5' A B 861 98.231 136.951 76.435 1.00 32.35 O
TER

Atoms:
OP1: (95.270,131.078,84.927)
OP2: (94.033,128.870,84.568)
C3': (90.034,130.392,83.638)
C1': (89.546,132.599,82.964)
C5': (91.999,131.067,85.166)
O4': (90.588,132.619,83.932)
C8: (90.436,134.208,81.227)
O2': (87.753,131.282,83.850)
C6: (91.256,132.300,78.401)
C5: (90.880,132.924,79.598)
C4: (90.405,132.112,80.609)
P: (94.308,130.267,84.154)
C4': (90.600,131.357,84.662)
C2': (88.901,131.214,83.031)
C2: (90.645,130.306,79.388)
N1: (91.123,130.960,78.326)
N3: (90.261,130.781,80.566)
N6: (91.735,132.953,77.341)
N7: (90.896,134.247,80.000)
N9: (90.110,132.951,81.657)
O5': (92.932,131.065,84.074)
O3': (89.586,129.178,84.219)
OP1: (97.173,137.473,70.412)
OP2: (96.689,135.117,69.532)
C3': (95.336,135.515,74.469)
C1': (93.376,134.249,74.106)
C5': (94.938,136.973,72.396)
O6: (93.714,128.787,71.659)
O4': (93.352,135.360,73.229)
C8: (94.310,133.000,72.109)
C2: (92.388,130.054,74.697)
C6: (93.437,129.619,72.531)
C5: (93.704,131.007,72.538)
C4: (93.276,131.762,73.608)
P: (96.214,136.366,70.164)
C4': (94.358,136.322,73.629)
C2': (94.405,134.551,75.194)
O2': (93.723,135.174,76.264)
N1: (92.765,129.223,73.681)
N2: (91.758,129.477,75.715)
N3: (92.615,131.354,74.712)
N7: (94.359,131.798,71.605)
N9: (93.652,133.055,73.314)
O5': (95.549,135.979,71.559)
O3': (96.038,136.349,75.400)
Image (generated by PyMOL):
PyMOL image
show in jmol