ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A953:A2143

Extra

PDB:
ATOM 1 O3' G A 952 -128.948 -66.279 13.242 1.00 28.92 O
ATOM 2 P A A 953 -128.829 -65.046 12.212 1.00 44.34 P
ATOM 3 OP1 A A 953 -130.207 -64.654 11.821 1.00 71.87 O
ATOM 4 OP2 A A 953 -127.844 -65.434 11.169 1.00 71.87 O
ATOM 5 O5' A A 953 -128.222 -63.866 13.097 1.00 22.16 O
ATOM 6 C5' A A 953 -127.037 -63.139 12.694 1.00 22.16 C
ATOM 7 C4' A A 953 -126.568 -62.251 13.832 1.00 22.16 C
ATOM 8 O4' A A 953 -125.790 -63.013 14.801 1.00 22.16 O
ATOM 9 C3' A A 953 -125.623 -61.144 13.440 1.00 22.16 C
ATOM 10 O3' A A 953 -126.320 -60.034 12.940 1.00 22.16 O
ATOM 11 C2' A A 953 -124.904 -60.820 14.742 1.00 22.16 C
ATOM 12 O2' A A 953 -125.667 -60.006 15.599 1.00 22.16 O
ATOM 13 C1' A A 953 -124.777 -62.199 15.372 1.00 22.16 C
ATOM 14 N9 A A 953 -123.471 -62.777 15.063 1.00 7.09 N
ATOM 15 C8 A A 953 -123.146 -63.749 14.146 1.00 7.09 C
ATOM 16 N7 A A 953 -121.861 -64.004 14.078 1.00 7.09 N
ATOM 17 C5 A A 953 -121.306 -63.159 15.022 1.00 7.09 C
ATOM 18 C6 A A 953 -119.982 -62.958 15.443 1.00 7.09 C
ATOM 19 N6 A A 953 -118.940 -63.630 14.944 1.00 7.09 N
ATOM 20 N1 A A 953 -119.760 -62.036 16.410 1.00 7.09 N
ATOM 21 C2 A A 953 -120.813 -61.373 16.911 1.00 7.09 C
ATOM 22 N3 A A 953 -122.106 -61.478 16.597 1.00 7.09 N
ATOM 23 C4 A A 953 -122.285 -62.400 15.638 1.00 7.09 C
ATOM 24 P G A 954 -125.540 -59.002 12.005 1.00 23.44 P
ATOM 25 OP1 G A 954 -126.397 -57.795 11.818 1.00 32.51 O
ATOM 26 OP2 G A 954 -124.982 -59.718 10.818 1.00 32.51 O
ATOM 27 O5' G A 954 -124.302 -58.641 12.907 1.00 17.75 O
TER

ATOM 1 O3' U B2142 -127.162 -58.831 18.203 1.00 16.47 O
ATOM 2 P A B2143 -126.732 -60.339 18.555 1.00 19.25 P
ATOM 3 OP1 A B2143 -125.270 -60.346 18.824 1.00 64.17 O
ATOM 4 OP2 A B2143 -127.289 -61.223 17.500 1.00 64.15 O
ATOM 5 O5' A B2143 -127.498 -60.612 19.918 1.00 34.26 O
ATOM 6 C5' A B2143 -128.074 -61.890 20.201 1.00 34.26 C
ATOM 7 C4' A B2143 -128.532 -61.921 21.631 1.00 34.26 C
ATOM 8 O4' A B2143 -127.373 -61.685 22.473 1.00 34.26 O
ATOM 9 C3' A B2143 -129.557 -60.848 21.989 1.00 34.26 C
ATOM 10 O3' A B2143 -130.430 -61.346 22.993 1.00 34.26 O
ATOM 11 C2' A B2143 -128.710 -59.741 22.604 1.00 34.26 C
ATOM 12 O2' A B2143 -129.451 -59.006 23.557 1.00 34.26 O
ATOM 13 C1' A B2143 -127.588 -60.541 23.270 1.00 34.26 C
ATOM 14 N9 A B2143 -126.322 -59.820 23.359 1.00 35.59 N
ATOM 15 C8 A B2143 -125.425 -59.562 22.354 1.00 35.63 C
ATOM 16 N7 A B2143 -124.377 -58.887 22.747 1.00 35.62 N
ATOM 17 C5 A B2143 -124.598 -58.689 24.099 1.00 35.68 C
ATOM 18 C6 A B2143 -123.854 -58.040 25.081 1.00 35.68 C
ATOM 19 N6 A B2143 -122.686 -57.449 24.842 1.00 35.70 N
ATOM 20 N1 A B2143 -124.352 -58.015 26.335 1.00 35.68 N
ATOM 21 C2 A B2143 -125.524 -58.609 26.566 1.00 35.71 C
ATOM 22 N3 A B2143 -126.318 -59.255 25.721 1.00 35.80 N
ATOM 23 C4 A B2143 -125.790 -59.258 24.489 1.00 35.70 C
ATOM 24 P A B2144 -131.780 -62.096 22.576 1.00 28.96 P
ATOM 25 OP1 A B2144 -132.639 -61.145 21.807 1.00 28.96 O
ATOM 26 OP2 A B2144 -132.307 -62.724 23.802 1.00 28.96 O
ATOM 27 O5' A B2144 -131.266 -63.258 21.629 1.00 21.93 O
TER

Atoms:
OP1: (-130.207,-64.654,11.821)
OP2: (-127.844,-65.434,11.169)
C3': (-125.623,-61.144,13.440)
C1': (-124.777,-62.199,15.372)
C5': (-127.037,-63.139,12.694)
O4': (-125.790,-63.013,14.801)
C8: (-123.146,-63.749,14.146)
O2': (-125.667,-60.006,15.599)
C6: (-119.982,-62.958,15.443)
C5: (-121.306,-63.159,15.022)
C4: (-122.285,-62.400,15.638)
P: (-128.829,-65.046,12.212)
C4': (-126.568,-62.251,13.832)
C2': (-124.904,-60.820,14.742)
C2: (-120.813,-61.373,16.911)
N1: (-119.760,-62.036,16.410)
N3: (-122.106,-61.478,16.597)
N6: (-118.940,-63.630,14.944)
N7: (-121.861,-64.004,14.078)
N9: (-123.471,-62.777,15.063)
O5': (-128.222,-63.866,13.097)
O3': (-126.320,-60.034,12.940)
OP1: (-125.270,-60.346,18.824)
OP2: (-127.289,-61.223,17.500)
C3': (-129.557,-60.848,21.989)
C1': (-127.588,-60.541,23.270)
C5': (-128.074,-61.890,20.201)
O4': (-127.373,-61.685,22.473)
C8: (-125.425,-59.562,22.354)
O2': (-129.451,-59.006,23.557)
C6: (-123.854,-58.040,25.081)
C5: (-124.598,-58.689,24.099)
C4: (-125.790,-59.258,24.489)
P: (-126.732,-60.339,18.555)
C4': (-128.532,-61.921,21.631)
C2': (-128.710,-59.741,22.604)
C2: (-125.524,-58.609,26.566)
N1: (-124.352,-58.015,26.335)
N3: (-126.318,-59.255,25.721)
N6: (-122.686,-57.449,24.842)
N7: (-124.377,-58.887,22.747)
N9: (-126.322,-59.820,23.359)
O5': (-127.498,-60.612,19.918)
O3': (-130.430,-61.346,22.993)
Image (generated by PyMOL):
PyMOL image
show in jmol