ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U8D:A51:A23

Extra

PDB:
ATOM 1 O3' A A 50 40.259 22.339 4.329 1.00 13.50 O
ATOM 2 P A A 51 39.022 23.077 3.643 1.00 14.28 P
ATOM 3 OP1 A A 51 39.543 23.558 2.325 1.00 15.32 O
ATOM 4 OP2 A A 51 38.338 24.024 4.542 1.00 14.63 O
ATOM 5 O5' A A 51 38.069 21.846 3.338 1.00 13.61 O
ATOM 6 C5' A A 51 37.465 21.085 4.393 1.00 11.48 C
ATOM 7 C4' A A 51 37.723 19.608 4.177 1.00 10.84 C
ATOM 8 O4' A A 51 39.051 19.241 4.669 1.00 10.26 O
ATOM 9 C3' A A 51 36.836 18.669 4.967 1.00 10.58 C
ATOM 10 O3' A A 51 35.542 18.590 4.389 1.00 8.43 O
ATOM 11 C2' A A 51 37.616 17.369 4.831 1.00 10.04 C
ATOM 12 O2' A A 51 37.536 16.826 3.529 1.00 11.06 O
ATOM 13 C1' A A 51 39.042 17.870 5.094 1.00 10.87 C
ATOM 14 N9 A A 51 39.240 17.798 6.548 1.00 10.17 N
ATOM 15 C8 A A 51 39.155 18.790 7.496 1.00 10.03 C
ATOM 16 N7 A A 51 39.261 18.348 8.733 1.00 8.56 N
ATOM 17 C5 A A 51 39.441 16.982 8.588 1.00 6.54 C
ATOM 18 C6 A A 51 39.556 15.933 9.533 1.00 10.49 C
ATOM 19 N6 A A 51 39.492 16.109 10.872 1.00 8.52 N
ATOM 20 N1 A A 51 39.716 14.683 9.059 1.00 10.25 N
ATOM 21 C2 A A 51 39.726 14.497 7.720 1.00 9.28 C
ATOM 22 N3 A A 51 39.599 15.400 6.739 1.00 6.99 N
ATOM 23 C4 A A 51 39.470 16.634 7.247 1.00 7.89 C
ATOM 24 P U A 52 34.254 18.628 5.328 1.00 7.15 P
ATOM 25 OP1 U A 52 33.113 18.369 4.451 1.00 8.19 O
ATOM 26 OP2 U A 52 34.265 19.889 6.140 1.00 10.54 O
ATOM 27 O5' U A 52 34.515 17.404 6.352 1.00 9.66 O
TER

ATOM 1 O3' G B 22 36.724 16.406 19.212 1.00 9.71 O
ATOM 2 P G B 23 35.372 15.646 18.858 1.00 12.29 P
ATOM 3 OP1 G B 23 34.265 16.448 19.436 1.00 9.96 O
ATOM 4 OP2 G B 23 35.501 14.191 19.191 1.00 11.57 O
ATOM 5 O5' G B 23 35.356 15.699 17.258 1.00 12.26 O
ATOM 6 C5' G B 23 35.114 16.920 16.540 1.00 10.01 C
ATOM 7 C4' G B 23 35.319 16.694 15.053 1.00 8.68 C
ATOM 8 O4' G B 23 36.699 16.352 14.806 1.00 7.01 O
ATOM 9 C3' G B 23 34.534 15.539 14.472 1.00 9.46 C
ATOM 10 O3' G B 23 33.210 15.990 14.155 1.00 12.58 O
ATOM 11 C2' G B 23 35.376 15.169 13.243 1.00 10.28 C
ATOM 12 O2' G B 23 35.157 15.985 12.097 1.00 9.67 O
ATOM 13 C1' G B 23 36.804 15.398 13.759 1.00 9.91 C
ATOM 14 N9 G B 23 37.412 14.173 14.300 1.00 9.70 N
ATOM 15 C8 G B 23 37.174 13.612 15.533 1.00 11.32 C
ATOM 16 N7 G B 23 37.702 12.417 15.664 1.00 11.54 N
ATOM 17 C5 G B 23 38.362 12.199 14.469 1.00 10.27 C
ATOM 18 C6 G B 23 39.035 11.045 13.994 1.00 11.93 C
ATOM 19 O6 G B 23 39.201 9.950 14.575 1.00 8.78 O
ATOM 20 N1 G B 23 39.522 11.236 12.701 1.00 9.87 N
ATOM 21 C2 G B 23 39.369 12.387 11.958 1.00 11.31 C
ATOM 22 N2 G B 23 39.901 12.384 10.710 1.00 10.24 N
ATOM 23 N3 G B 23 38.739 13.460 12.390 1.00 9.09 N
ATOM 24 C4 G B 23 38.251 13.297 13.636 1.00 11.34 C
ATOM 25 P C B 24 31.929 15.084 14.534 1.00 12.06 P
ATOM 26 OP1 C B 24 32.388 13.880 15.288 1.00 14.53 O
ATOM 27 OP2 C B 24 31.165 14.878 13.278 1.00 12.02 O
ATOM 28 O5' C B 24 30.903 16.101 15.235 1.00 17.76 O
TER

Atoms:
OP1: (39.543,23.558,2.325)
OP2: (38.338,24.024,4.542)
C3': (36.836,18.669,4.967)
C1': (39.042,17.870,5.094)
C5': (37.465,21.085,4.393)
O4': (39.051,19.241,4.669)
C8: (39.155,18.790,7.496)
O2': (37.536,16.826,3.529)
C6: (39.556,15.933,9.533)
C5: (39.441,16.982,8.588)
C4: (39.470,16.634,7.247)
P: (39.022,23.077,3.643)
C4': (37.723,19.608,4.177)
C2': (37.616,17.369,4.831)
C2: (39.726,14.497,7.720)
N1: (39.716,14.683,9.059)
N3: (39.599,15.400,6.739)
N6: (39.492,16.109,10.872)
N7: (39.261,18.348,8.733)
N9: (39.240,17.798,6.548)
O5': (38.069,21.846,3.338)
O3': (35.542,18.590,4.389)
OP1: (34.265,16.448,19.436)
OP2: (35.501,14.191,19.191)
C3': (34.534,15.539,14.472)
C1': (36.804,15.398,13.759)
C5': (35.114,16.920,16.540)
O6: (39.201,9.950,14.575)
O4': (36.699,16.352,14.806)
C8: (37.174,13.612,15.533)
C2: (39.369,12.387,11.958)
C6: (39.035,11.045,13.994)
C5: (38.362,12.199,14.469)
C4: (38.251,13.297,13.636)
P: (35.372,15.646,18.858)
C4': (35.319,16.694,15.053)
C2': (35.376,15.169,13.243)
O2': (35.157,15.985,12.097)
N1: (39.522,11.236,12.701)
N2: (39.901,12.384,10.710)
N3: (38.739,13.460,12.390)
N7: (37.702,12.417,15.664)
N9: (37.412,14.173,14.300)
O5': (35.356,15.699,17.258)
O3': (33.210,15.990,14.155)
Image (generated by PyMOL):
PyMOL image
show in jmol