Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTA:B8:A9
Extra
PDB:
ATOM 1 O3' A A 7 11.298 40.160 3.686 1.00 43.03 O
ATOM 2 P C A 8 12.105 41.313 2.969 1.00 41.43 P
ATOM 3 OP1 C A 8 13.506 41.355 3.419 1.00 44.54 O
ATOM 4 OP2 C A 8 11.255 42.525 3.064 1.00 42.01 O
ATOM 5 O5' C A 8 12.215 40.803 1.486 1.00 40.85 O
ATOM 6 C5' C A 8 12.942 39.627 1.228 1.00 40.17 C
ATOM 7 C4' C A 8 12.304 38.920 0.061 1.00 40.63 C
ATOM 8 O4' C A 8 12.293 39.824 -1.055 1.00 41.65 O
ATOM 9 C3' C A 8 13.017 37.703 -0.489 1.00 40.34 C
ATOM 10 O3' C A 8 12.760 36.587 0.323 1.00 39.29 O
ATOM 11 C2' C A 8 12.364 37.599 -1.854 1.00 41.23 C
ATOM 12 O2' C A 8 11.074 37.005 -1.803 1.00 42.45 O
ATOM 13 C1' C A 8 12.213 39.063 -2.244 1.00 42.97 C
ATOM 14 N1 C A 8 13.220 39.581 -3.223 1.00 44.51 N
ATOM 15 C2 C A 8 12.838 39.777 -4.563 1.00 44.99 C
ATOM 16 O2 C A 8 11.705 39.502 -4.930 1.00 44.49 O
ATOM 17 N3 C A 8 13.719 40.267 -5.435 1.00 47.03 N
ATOM 18 C4 C A 8 14.934 40.577 -5.045 1.00 47.91 C
ATOM 19 N4 C A 8 15.747 41.059 -5.986 1.00 50.25 N
ATOM 20 C5 C A 8 15.369 40.401 -3.686 1.00 47.54 C
ATOM 21 C6 C A 8 14.480 39.908 -2.810 1.00 45.82 C
ATOM 22 P G A 9 13.349 35.124 0.049 1.00 37.32 P
ATOM 23 OP1 G A 9 14.778 35.251 -0.297 1.00 34.11 O
ATOM 24 OP2 G A 9 12.426 34.389 -0.852 1.00 38.53 O
ATOM 25 O5' G A 9 13.119 34.517 1.537 1.00 37.28 O
TER
ATOM 1 O3' U B 8 10.525 43.748 -11.631 1.00 44.38 O
ATOM 2 P U B 9 11.300 43.400 -10.240 1.00 43.44 P
ATOM 3 OP1 U B 9 12.007 44.624 -9.803 1.00 42.16 O
ATOM 4 OP2 U B 9 12.096 42.147 -10.407 1.00 42.37 O
ATOM 5 O5' U B 9 10.080 43.154 -9.193 1.00 42.26 O
ATOM 6 C5' U B 9 9.507 41.837 -8.958 1.00 42.00 C
ATOM 7 C4' U B 9 9.173 41.560 -7.471 1.00 41.23 C
ATOM 8 O4' U B 9 10.371 41.584 -6.671 1.00 42.50 O
ATOM 9 C3' U B 9 8.221 42.524 -6.760 1.00 39.48 C
ATOM 10 O3' U B 9 7.233 41.770 -6.027 1.00 37.21 O
ATOM 11 C2' U B 9 9.122 43.355 -5.853 1.00 39.05 C
ATOM 12 O2' U B 9 8.473 43.834 -4.705 1.00 37.45 O
ATOM 13 C1' U B 9 10.149 42.323 -5.485 1.00 41.28 C
ATOM 14 N1 U B 9 11.480 42.823 -5.063 1.00 42.51 N
ATOM 15 C2 U B 9 11.935 42.593 -3.774 1.00 42.24 C
ATOM 16 O2 U B 9 11.278 42.033 -2.913 1.00 39.46 O
ATOM 17 N3 U B 9 13.209 43.054 -3.530 1.00 43.63 N
ATOM 18 C4 U B 9 14.049 43.695 -4.436 1.00 44.36 C
ATOM 19 O4 U B 9 15.170 44.054 -4.091 1.00 45.60 O
ATOM 20 C5 U B 9 13.503 43.879 -5.757 1.00 44.35 C
ATOM 21 C6 U B 9 12.273 43.437 -6.017 1.00 43.14 C
ATOM 22 P U B 10 5.720 41.668 -6.593 1.00 35.74 P
ATOM 23 OP1 U B 10 5.858 41.641 -8.074 1.00 34.47 O
ATOM 24 OP2 U B 10 4.925 42.727 -5.910 1.00 30.93 O
ATOM 25 O5' U B 10 5.191 40.221 -6.163 1.00 36.93 O
TER
ATOM 2 P C A 8 12.105 41.313 2.969 1.00 41.43 P
ATOM 3 OP1 C A 8 13.506 41.355 3.419 1.00 44.54 O
ATOM 4 OP2 C A 8 11.255 42.525 3.064 1.00 42.01 O
ATOM 5 O5' C A 8 12.215 40.803 1.486 1.00 40.85 O
ATOM 6 C5' C A 8 12.942 39.627 1.228 1.00 40.17 C
ATOM 7 C4' C A 8 12.304 38.920 0.061 1.00 40.63 C
ATOM 8 O4' C A 8 12.293 39.824 -1.055 1.00 41.65 O
ATOM 9 C3' C A 8 13.017 37.703 -0.489 1.00 40.34 C
ATOM 10 O3' C A 8 12.760 36.587 0.323 1.00 39.29 O
ATOM 11 C2' C A 8 12.364 37.599 -1.854 1.00 41.23 C
ATOM 12 O2' C A 8 11.074 37.005 -1.803 1.00 42.45 O
ATOM 13 C1' C A 8 12.213 39.063 -2.244 1.00 42.97 C
ATOM 14 N1 C A 8 13.220 39.581 -3.223 1.00 44.51 N
ATOM 15 C2 C A 8 12.838 39.777 -4.563 1.00 44.99 C
ATOM 16 O2 C A 8 11.705 39.502 -4.930 1.00 44.49 O
ATOM 17 N3 C A 8 13.719 40.267 -5.435 1.00 47.03 N
ATOM 18 C4 C A 8 14.934 40.577 -5.045 1.00 47.91 C
ATOM 19 N4 C A 8 15.747 41.059 -5.986 1.00 50.25 N
ATOM 20 C5 C A 8 15.369 40.401 -3.686 1.00 47.54 C
ATOM 21 C6 C A 8 14.480 39.908 -2.810 1.00 45.82 C
ATOM 22 P G A 9 13.349 35.124 0.049 1.00 37.32 P
ATOM 23 OP1 G A 9 14.778 35.251 -0.297 1.00 34.11 O
ATOM 24 OP2 G A 9 12.426 34.389 -0.852 1.00 38.53 O
ATOM 25 O5' G A 9 13.119 34.517 1.537 1.00 37.28 O
TER
ATOM 1 O3' U B 8 10.525 43.748 -11.631 1.00 44.38 O
ATOM 2 P U B 9 11.300 43.400 -10.240 1.00 43.44 P
ATOM 3 OP1 U B 9 12.007 44.624 -9.803 1.00 42.16 O
ATOM 4 OP2 U B 9 12.096 42.147 -10.407 1.00 42.37 O
ATOM 5 O5' U B 9 10.080 43.154 -9.193 1.00 42.26 O
ATOM 6 C5' U B 9 9.507 41.837 -8.958 1.00 42.00 C
ATOM 7 C4' U B 9 9.173 41.560 -7.471 1.00 41.23 C
ATOM 8 O4' U B 9 10.371 41.584 -6.671 1.00 42.50 O
ATOM 9 C3' U B 9 8.221 42.524 -6.760 1.00 39.48 C
ATOM 10 O3' U B 9 7.233 41.770 -6.027 1.00 37.21 O
ATOM 11 C2' U B 9 9.122 43.355 -5.853 1.00 39.05 C
ATOM 12 O2' U B 9 8.473 43.834 -4.705 1.00 37.45 O
ATOM 13 C1' U B 9 10.149 42.323 -5.485 1.00 41.28 C
ATOM 14 N1 U B 9 11.480 42.823 -5.063 1.00 42.51 N
ATOM 15 C2 U B 9 11.935 42.593 -3.774 1.00 42.24 C
ATOM 16 O2 U B 9 11.278 42.033 -2.913 1.00 39.46 O
ATOM 17 N3 U B 9 13.209 43.054 -3.530 1.00 43.63 N
ATOM 18 C4 U B 9 14.049 43.695 -4.436 1.00 44.36 C
ATOM 19 O4 U B 9 15.170 44.054 -4.091 1.00 45.60 O
ATOM 20 C5 U B 9 13.503 43.879 -5.757 1.00 44.35 C
ATOM 21 C6 U B 9 12.273 43.437 -6.017 1.00 43.14 C
ATOM 22 P U B 10 5.720 41.668 -6.593 1.00 35.74 P
ATOM 23 OP1 U B 10 5.858 41.641 -8.074 1.00 34.47 O
ATOM 24 OP2 U B 10 4.925 42.727 -5.910 1.00 30.93 O
ATOM 25 O5' U B 10 5.191 40.221 -6.163 1.00 36.93 O
TER
Atoms:
C2: (12.838,39.777,-4.563)
OP1: (13.506,41.355,3.419)
OP2: (11.255,42.525,3.064)
C4: (14.934,40.577,-5.045)
O5': (12.215,40.803,1.486)
C3': (13.017,37.703,-0.489)
C1': (12.213,39.063,-2.244)
O4': (12.293,39.824,-1.055)
C5': (12.942,39.627,1.228)
P: (12.105,41.313,2.969)
O2: (11.705,39.502,-4.930)
C4': (12.304,38.920,0.061)
C2': (12.364,37.599,-1.854)
O2': (11.074,37.005,-1.803)
N1: (13.220,39.581,-3.223)
N3: (13.719,40.267,-5.435)
N4: (15.747,41.059,-5.986)
C6: (14.480,39.908,-2.810)
C5: (15.369,40.401,-3.686)
O3': (12.760,36.587,0.323)
OP1: (13.506,41.355,3.419)
OP2: (11.255,42.525,3.064)
C4: (14.934,40.577,-5.045)
O5': (12.215,40.803,1.486)
C3': (13.017,37.703,-0.489)
C1': (12.213,39.063,-2.244)
O4': (12.293,39.824,-1.055)
C5': (12.942,39.627,1.228)
P: (12.105,41.313,2.969)
O2: (11.705,39.502,-4.930)
C4': (12.304,38.920,0.061)
C2': (12.364,37.599,-1.854)
O2': (11.074,37.005,-1.803)
N1: (13.220,39.581,-3.223)
N3: (13.719,40.267,-5.435)
N4: (15.747,41.059,-5.986)
C6: (14.480,39.908,-2.810)
C5: (15.369,40.401,-3.686)
O3': (12.760,36.587,0.323)
C4: (14.049,43.695,-4.436)
N3: (13.209,43.054,-3.530)
OP1: (12.007,44.624,-9.803)
OP2: (12.096,42.147,-10.407)
C2: (11.935,42.593,-3.774)
C1': (10.149,42.323,-5.485)
C3': (8.221,42.524,-6.760)
O5': (10.080,43.154,-9.193)
O4': (10.371,41.584,-6.671)
C5': (9.507,41.837,-8.958)
P: (11.300,43.400,-10.240)
C4': (9.173,41.560,-7.471)
C2': (9.122,43.355,-5.853)
O2': (8.473,43.834,-4.705)
N1: (11.480,42.823,-5.063)
O4: (15.170,44.054,-4.091)
O2: (11.278,42.033,-2.913)
C6: (12.273,43.437,-6.017)
C5: (13.503,43.879,-5.757)
O3': (7.233,41.770,-6.027)
N3: (13.209,43.054,-3.530)
OP1: (12.007,44.624,-9.803)
OP2: (12.096,42.147,-10.407)
C2: (11.935,42.593,-3.774)
C1': (10.149,42.323,-5.485)
C3': (8.221,42.524,-6.760)
O5': (10.080,43.154,-9.193)
O4': (10.371,41.584,-6.671)
C5': (9.507,41.837,-8.958)
P: (11.300,43.400,-10.240)
C4': (9.173,41.560,-7.471)
C2': (9.122,43.355,-5.853)
O2': (8.473,43.834,-4.705)
N1: (11.480,42.823,-5.063)
O4: (15.170,44.054,-4.091)
O2: (11.278,42.033,-2.913)
C6: (12.273,43.437,-6.017)
C5: (13.503,43.879,-5.757)
O3': (7.233,41.770,-6.027)
Image (generated by PyMOL):