ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:21370:21391

Extra

PDB:
ATOM 1 O3' G A1369 -109.532 -54.453 76.979 1.00 93.35 O
ATOM 2 P A A1370 -109.784 -52.993 77.580 1.00 93.25 P
ATOM 3 OP1 A A1370 -110.623 -53.153 78.813 1.00 94.21 O
ATOM 4 OP2 A A1370 -110.294 -52.140 76.472 1.00 93.11 O
ATOM 5 O5' A A1370 -108.291 -52.555 77.967 1.00 92.20 O
ATOM 6 C5' A A1370 -107.868 -51.192 77.926 1.00 91.55 C
ATOM 7 C4' A A1370 -106.364 -51.084 77.847 1.00 90.49 C
ATOM 8 O4' A A1370 -105.767 -51.989 78.820 1.00 90.58 O
ATOM 9 C3' A A1370 -105.752 -51.469 76.500 1.00 89.84 C
ATOM 10 O3' A A1370 -104.516 -50.754 76.330 1.00 88.81 O
ATOM 11 C2' A A1370 -105.444 -52.950 76.716 1.00 90.08 C
ATOM 12 O2' A A1370 -104.495 -53.493 75.826 1.00 89.38 O
ATOM 13 C1' A A1370 -104.928 -52.913 78.146 1.00 90.10 C
ATOM 14 N9 A A1370 -104.983 -54.185 78.869 1.00 90.68 N
ATOM 15 C8 A A1370 -106.081 -54.777 79.434 1.00 91.72 C
ATOM 16 N7 A A1370 -105.809 -55.888 80.086 1.00 92.05 N
ATOM 17 C5 A A1370 -104.428 -56.029 79.979 1.00 91.17 C
ATOM 18 C6 A A1370 -103.513 -57.001 80.463 1.00 91.03 C
ATOM 19 N6 A A1370 -103.851 -58.077 81.188 1.00 91.81 N
ATOM 20 N1 A A1370 -102.207 -56.843 80.167 1.00 90.08 N
ATOM 21 C2 A A1370 -101.865 -55.775 79.440 1.00 89.34 C
ATOM 22 N3 A A1370 -102.625 -54.799 78.939 1.00 89.38 N
ATOM 23 C4 A A1370 -103.915 -54.976 79.241 1.00 90.32 C
ATOM 24 P C A1371 -104.487 -49.232 75.792 1.00 91.38 P
ATOM 25 OP1 C A1371 -105.453 -49.131 74.689 1.00 91.75 O
ATOM 26 OP2 C A1371 -103.082 -48.920 75.507 1.00 90.33 O
ATOM 27 O5' C A1371 -105.005 -48.388 77.044 1.00 91.81 O
TER

ATOM 1 O3' G B1390 -107.089 -64.776 85.380 1.00112.74 O
ATOM 2 P G B1391 -106.411 -65.767 84.320 1.00116.80 P
ATOM 3 OP1 G B1391 -107.427 -66.782 83.968 1.00117.70 O
ATOM 4 OP2 G B1391 -105.118 -66.215 84.906 1.00116.37 O
ATOM 5 O5' G B1391 -106.130 -64.829 83.072 1.00115.81 O
ATOM 6 C5' G B1391 -107.035 -63.806 82.697 1.00115.89 C
ATOM 7 C4' G B1391 -106.322 -62.711 81.948 1.00114.79 C
ATOM 8 O4' G B1391 -105.450 -61.990 82.856 1.00114.29 O
ATOM 9 C3' G B1391 -105.387 -63.166 80.833 1.00113.97 C
ATOM 10 O3' G B1391 -106.066 -63.472 79.626 1.00114.12 O
ATOM 11 C2' G B1391 -104.433 -61.994 80.707 1.00112.93 C
ATOM 12 O2' G B1391 -105.029 -60.945 79.962 1.00112.71 O
ATOM 13 C1' G B1391 -104.309 -61.541 82.163 1.00113.18 C
ATOM 14 N9 G B1391 -103.105 -62.093 82.807 1.00112.84 N
ATOM 15 C8 G B1391 -102.926 -63.210 83.591 1.00113.41 C
ATOM 16 N7 G B1391 -101.680 -63.373 83.977 1.00112.86 N
ATOM 17 C5 G B1391 -101.002 -62.307 83.390 1.00111.86 C
ATOM 18 C6 G B1391 -99.636 -61.929 83.415 1.00110.93 C
ATOM 19 O6 G B1391 -98.709 -62.493 84.002 1.00110.82 O
ATOM 20 N1 G B1391 -99.397 -60.767 82.675 1.00110.13 N
ATOM 21 C2 G B1391 -100.355 -60.056 81.988 1.00110.21 C
ATOM 22 N2 G B1391 -99.984 -58.953 81.322 1.00109.40 N
ATOM 23 N3 G B1391 -101.623 -60.396 81.956 1.00111.07 N
ATOM 24 C4 G B1391 -101.869 -61.518 82.668 1.00111.84 C
ATOM 25 P A B1392 -105.728 -64.832 78.825 1.00 99.78 P
ATOM 26 OP1 A B1392 -106.903 -65.124 77.935 1.00100.35 O
ATOM 27 OP2 A B1392 -105.324 -65.843 79.840 1.00100.21 O
ATOM 28 O5' A B1392 -104.458 -64.418 77.942 1.00 98.56 O
TER

Atoms:
OP1: (-110.623,-53.153,78.813)
OP2: (-110.294,-52.140,76.472)
C3': (-105.752,-51.469,76.500)
C1': (-104.928,-52.913,78.146)
C5': (-107.868,-51.192,77.926)
O4': (-105.767,-51.989,78.820)
C8: (-106.081,-54.777,79.434)
O2': (-104.495,-53.493,75.826)
C6: (-103.513,-57.001,80.463)
C5: (-104.428,-56.029,79.979)
C4: (-103.915,-54.976,79.241)
P: (-109.784,-52.993,77.580)
C4': (-106.364,-51.084,77.847)
C2': (-105.444,-52.950,76.716)
C2: (-101.865,-55.775,79.440)
N1: (-102.207,-56.843,80.167)
N3: (-102.625,-54.799,78.939)
N6: (-103.851,-58.077,81.188)
N7: (-105.809,-55.888,80.086)
N9: (-104.983,-54.185,78.869)
O5': (-108.291,-52.555,77.967)
O3': (-104.516,-50.754,76.330)
OP1: (-107.427,-66.782,83.968)
OP2: (-105.118,-66.215,84.906)
C3': (-105.387,-63.166,80.833)
C1': (-104.309,-61.541,82.163)
C5': (-107.035,-63.806,82.697)
O6: (-98.709,-62.493,84.002)
O4': (-105.450,-61.990,82.856)
C8: (-102.926,-63.210,83.591)
C2: (-100.355,-60.056,81.988)
C6: (-99.636,-61.929,83.415)
C5: (-101.002,-62.307,83.390)
C4: (-101.869,-61.518,82.668)
P: (-106.411,-65.767,84.320)
C4': (-106.322,-62.711,81.948)
C2': (-104.433,-61.994,80.707)
O2': (-105.029,-60.945,79.962)
N1: (-99.397,-60.767,82.675)
N2: (-99.984,-58.953,81.322)
N3: (-101.623,-60.396,81.956)
N7: (-101.680,-63.373,83.977)
N9: (-103.105,-62.093,82.807)
O5': (-106.130,-64.829,83.072)
O3': (-106.066,-63.472,79.626)
Image (generated by PyMOL):
PyMOL image
show in jmol