ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0617:02016

Extra

PDB:
ATOM 1 P A A 617 39.411 112.029 95.348 1.00 32.00 P
ATOM 2 OP1 A A 617 39.214 110.875 96.261 1.00 31.90 O
ATOM 3 OP2 A A 617 38.728 112.043 94.028 1.00 33.14 O
ATOM 4 O5' A A 617 39.082 113.369 96.156 1.00 30.21 O
ATOM 5 C5' A A 617 38.598 114.566 95.491 1.00 28.79 C
ATOM 6 C4' A A 617 39.147 115.804 96.180 1.00 29.91 C
ATOM 7 O4' A A 617 38.814 115.725 97.592 1.00 31.07 O
ATOM 8 C3' A A 617 40.666 115.951 96.177 1.00 31.36 C
ATOM 9 O3' A A 617 41.165 116.575 94.995 1.00 29.85 O
ATOM 10 C2' A A 617 40.916 116.821 97.401 1.00 31.72 C
ATOM 11 O2' A A 617 40.667 118.195 97.159 1.00 33.30 O
ATOM 12 C1' A A 617 39.871 116.274 98.372 1.00 32.08 C
ATOM 13 N9 A A 617 40.395 115.238 99.271 1.00 33.49 N
ATOM 14 C8 A A 617 40.019 113.917 99.355 1.00 34.31 C
ATOM 15 N7 A A 617 40.673 113.237 100.267 1.00 34.34 N
ATOM 16 C5 A A 617 41.543 114.169 100.820 1.00 33.12 C
ATOM 17 C6 A A 617 42.517 114.070 101.832 1.00 33.82 C
ATOM 18 N6 A A 617 42.783 112.942 102.500 1.00 35.70 N
ATOM 19 N1 A A 617 43.217 115.180 102.142 1.00 33.67 N
ATOM 20 C2 A A 617 42.946 116.315 101.480 1.00 33.77 C
ATOM 21 N3 A A 617 42.056 116.535 100.514 1.00 34.18 N
ATOM 22 C4 A A 617 41.380 115.406 100.223 1.00 33.62 C
ATOM 23 P A A 618 42.446 115.958 94.243 1.00 32.97 P
ATOM 24 OP1 A A 618 42.491 116.676 92.943 1.00 35.96 O
ATOM 25 OP2 A A 618 42.410 114.462 94.253 1.00 33.65 O
ATOM 26 O5' A A 618 43.717 116.336 95.139 1.00 33.26 O
TER

ATOM 1 O3' U B2015 42.381 107.765 109.839 1.00 31.36 O
ATOM 2 P G B2016 43.570 107.064 109.016 1.00 33.17 P
ATOM 3 OP1 G B2016 43.171 105.644 108.775 1.00 32.65 O
ATOM 4 OP2 G B2016 44.863 107.347 109.720 1.00 35.33 O
ATOM 5 O5' G B2016 43.562 107.844 107.620 1.00 32.89 O
ATOM 6 C5' G B2016 42.489 107.675 106.673 1.00 31.21 C
ATOM 7 C4' G B2016 42.664 108.624 105.504 1.00 33.13 C
ATOM 8 O4' G B2016 42.564 109.999 105.958 1.00 35.07 O
ATOM 9 C3' G B2016 44.009 108.561 104.808 1.00 33.90 C
ATOM 10 O3' G B2016 44.014 107.497 103.871 1.00 36.38 O
ATOM 11 C2' G B2016 44.107 109.932 104.147 1.00 34.01 C
ATOM 12 O2' G B2016 43.396 110.048 102.934 1.00 34.96 O
ATOM 13 C1' G B2016 43.440 110.821 105.199 1.00 34.73 C
ATOM 14 N9 G B2016 44.400 111.445 106.108 1.00 34.87 N
ATOM 15 C8 G B2016 44.921 110.907 107.260 1.00 35.01 C
ATOM 16 N7 G B2016 45.782 111.693 107.850 1.00 35.89 N
ATOM 17 C5 G B2016 45.835 112.817 107.038 1.00 33.53 C
ATOM 18 C6 G B2016 46.603 113.992 107.159 1.00 33.18 C
ATOM 19 O6 G B2016 47.437 114.278 108.021 1.00 35.37 O
ATOM 20 N1 G B2016 46.332 114.888 106.135 1.00 31.81 N
ATOM 21 C2 G B2016 45.442 114.674 105.119 1.00 31.22 C
ATOM 22 N2 G B2016 45.295 115.670 104.250 1.00 32.66 N
ATOM 23 N3 G B2016 44.740 113.570 104.973 1.00 32.24 N
ATOM 24 C4 G B2016 44.980 112.689 105.967 1.00 34.11 C
ATOM 25 P C B2017 45.315 106.560 103.727 1.00 38.99 P
ATOM 26 OP1 C B2017 44.894 105.467 102.814 1.00 34.96 O
ATOM 27 OP2 C B2017 45.829 106.214 105.093 1.00 36.17 O
ATOM 28 O5' C B2017 46.364 107.511 102.982 1.00 36.32 O
TER

Atoms:
OP1: (39.214,110.875,96.261)
OP2: (38.728,112.043,94.028)
C3': (40.666,115.951,96.177)
C1': (39.871,116.274,98.372)
C5': (38.598,114.566,95.491)
O4': (38.814,115.725,97.592)
C8: (40.019,113.917,99.355)
O2': (40.667,118.195,97.159)
C6: (42.517,114.070,101.832)
C5: (41.543,114.169,100.820)
C4: (41.380,115.406,100.223)
P: (39.411,112.029,95.348)
C4': (39.147,115.804,96.180)
C2': (40.916,116.821,97.401)
C2: (42.946,116.315,101.480)
N1: (43.217,115.180,102.142)
N3: (42.056,116.535,100.514)
N6: (42.783,112.942,102.500)
N7: (40.673,113.237,100.267)
N9: (40.395,115.238,99.271)
O5': (39.082,113.369,96.156)
O3': (41.165,116.575,94.995)
OP1: (43.171,105.644,108.775)
OP2: (44.863,107.347,109.720)
C3': (44.009,108.561,104.808)
C1': (43.440,110.821,105.199)
C5': (42.489,107.675,106.673)
O6: (47.437,114.278,108.021)
O4': (42.564,109.999,105.958)
C8: (44.921,110.907,107.260)
C2: (45.442,114.674,105.119)
C6: (46.603,113.992,107.159)
C5: (45.835,112.817,107.038)
C4: (44.980,112.689,105.967)
P: (43.570,107.064,109.016)
C4': (42.664,108.624,105.504)
C2': (44.107,109.932,104.147)
O2': (43.396,110.048,102.934)
N1: (46.332,114.888,106.135)
N2: (45.295,115.670,104.250)
N3: (44.740,113.570,104.973)
N7: (45.782,111.693,107.850)
N9: (44.400,111.445,106.108)
O5': (43.562,107.844,107.620)
O3': (44.014,107.497,103.871)
Image (generated by PyMOL):
PyMOL image
show in jmol