Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MDG:C4:C2
Extra
PDB:
ATOM 1 O3' U A 3 29.341 26.955 -6.519 1.00 44.15 O
ATOM 2 P A A 4 29.154 28.311 -5.673 1.00 42.93 P
ATOM 3 OP1 A A 4 27.771 28.798 -5.903 1.00 39.82 O
ATOM 4 OP2 A A 4 30.346 29.139 -6.011 1.00 39.60 O
ATOM 5 O5' A A 4 29.245 27.809 -4.163 1.00 43.52 O
ATOM 6 C5' A A 4 29.645 28.675 -3.102 1.00 41.98 C
ATOM 7 C4' A A 4 30.787 28.057 -2.335 1.00 39.72 C
ATOM 8 O4' A A 4 30.266 26.906 -1.621 1.00 32.01 O
ATOM 9 C3' A A 4 31.924 27.545 -3.218 1.00 36.17 C
ATOM 10 O3' A A 4 33.169 27.651 -2.527 1.00 37.82 O
ATOM 11 C2' A A 4 31.552 26.081 -3.429 1.00 38.07 C
ATOM 12 O2' A A 4 32.654 25.228 -3.666 1.00 39.29 O
ATOM 13 C1' A A 4 30.802 25.713 -2.144 1.00 33.13 C
ATOM 14 N9 A A 4 29.632 24.883 -2.419 1.00 33.67 N
ATOM 15 C8 A A 4 28.318 25.291 -2.388 1.00 34.41 C
ATOM 16 N7 A A 4 27.466 24.342 -2.695 1.00 34.21 N
ATOM 17 C5 A A 4 28.281 23.243 -2.947 1.00 33.35 C
ATOM 18 C6 A A 4 27.985 21.926 -3.331 1.00 33.79 C
ATOM 19 N6 A A 4 26.735 21.500 -3.529 1.00 34.00 N
ATOM 20 N1 A A 4 29.025 21.069 -3.508 1.00 34.56 N
ATOM 21 C2 A A 4 30.278 21.521 -3.316 1.00 33.66 C
ATOM 22 N3 A A 4 30.684 22.742 -2.956 1.00 32.77 N
ATOM 23 C4 A A 4 29.622 23.560 -2.784 1.00 32.31 C
ATOM 24 P U A 5 34.166 28.898 -2.763 1.00 31.70 P
ATOM 25 OP1 U A 5 33.932 29.372 -4.144 1.00 31.50 O
ATOM 26 OP2 U A 5 35.517 28.439 -2.358 1.00 31.38 O
ATOM 27 O5' U A 5 33.588 29.982 -1.761 1.00 28.64 O
TER
ATOM 1 O3' U B 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 2 P G B 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 3 OP1 G B 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 4 OP2 G B 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 5 O5' G B 2 20.699 21.253 -5.745 1.00 52.33 O
ATOM 6 C5' G B 2 21.558 21.225 -4.611 1.00 40.65 C
ATOM 7 C4' G B 2 22.955 21.646 -4.996 1.00 37.70 C
ATOM 8 O4' G B 2 23.865 20.538 -4.758 1.00 38.24 O
ATOM 9 C3' G B 2 23.142 22.027 -6.464 1.00 35.55 C
ATOM 10 O3' G B 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 11 C2' G B 2 23.637 20.730 -7.088 1.00 40.44 C
ATOM 12 O2' G B 2 24.365 20.895 -8.289 1.00 40.81 O
ATOM 13 C1' G B 2 24.527 20.206 -5.965 1.00 38.73 C
ATOM 14 N9 G B 2 24.760 18.762 -6.003 1.00 34.49 N
ATOM 15 C8 G B 2 23.917 17.795 -6.493 1.00 33.74 C
ATOM 16 N7 G B 2 24.421 16.592 -6.394 1.00 36.90 N
ATOM 17 C5 G B 2 25.671 16.774 -5.805 1.00 35.10 C
ATOM 18 C6 G B 2 26.684 15.837 -5.442 1.00 37.24 C
ATOM 19 O6 G B 2 26.678 14.599 -5.573 1.00 42.89 O
ATOM 20 N1 G B 2 27.795 16.465 -4.874 1.00 31.79 N
ATOM 21 C2 G B 2 27.922 17.819 -4.676 1.00 30.75 C
ATOM 22 N2 G B 2 29.067 18.235 -4.108 1.00 32.48 N
ATOM 23 N3 G B 2 26.988 18.699 -5.005 1.00 32.46 N
ATOM 24 C4 G B 2 25.897 18.116 -5.563 1.00 35.99 C
ATOM 25 P U B 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 26 OP1 U B 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 27 OP2 U B 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 28 O5' U B 3 25.576 24.912 -7.245 1.00 42.33 O
TER
ATOM 2 P A A 4 29.154 28.311 -5.673 1.00 42.93 P
ATOM 3 OP1 A A 4 27.771 28.798 -5.903 1.00 39.82 O
ATOM 4 OP2 A A 4 30.346 29.139 -6.011 1.00 39.60 O
ATOM 5 O5' A A 4 29.245 27.809 -4.163 1.00 43.52 O
ATOM 6 C5' A A 4 29.645 28.675 -3.102 1.00 41.98 C
ATOM 7 C4' A A 4 30.787 28.057 -2.335 1.00 39.72 C
ATOM 8 O4' A A 4 30.266 26.906 -1.621 1.00 32.01 O
ATOM 9 C3' A A 4 31.924 27.545 -3.218 1.00 36.17 C
ATOM 10 O3' A A 4 33.169 27.651 -2.527 1.00 37.82 O
ATOM 11 C2' A A 4 31.552 26.081 -3.429 1.00 38.07 C
ATOM 12 O2' A A 4 32.654 25.228 -3.666 1.00 39.29 O
ATOM 13 C1' A A 4 30.802 25.713 -2.144 1.00 33.13 C
ATOM 14 N9 A A 4 29.632 24.883 -2.419 1.00 33.67 N
ATOM 15 C8 A A 4 28.318 25.291 -2.388 1.00 34.41 C
ATOM 16 N7 A A 4 27.466 24.342 -2.695 1.00 34.21 N
ATOM 17 C5 A A 4 28.281 23.243 -2.947 1.00 33.35 C
ATOM 18 C6 A A 4 27.985 21.926 -3.331 1.00 33.79 C
ATOM 19 N6 A A 4 26.735 21.500 -3.529 1.00 34.00 N
ATOM 20 N1 A A 4 29.025 21.069 -3.508 1.00 34.56 N
ATOM 21 C2 A A 4 30.278 21.521 -3.316 1.00 33.66 C
ATOM 22 N3 A A 4 30.684 22.742 -2.956 1.00 32.77 N
ATOM 23 C4 A A 4 29.622 23.560 -2.784 1.00 32.31 C
ATOM 24 P U A 5 34.166 28.898 -2.763 1.00 31.70 P
ATOM 25 OP1 U A 5 33.932 29.372 -4.144 1.00 31.50 O
ATOM 26 OP2 U A 5 35.517 28.439 -2.358 1.00 31.38 O
ATOM 27 O5' U A 5 33.588 29.982 -1.761 1.00 28.64 O
TER
ATOM 1 O3' U B 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 2 P G B 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 3 OP1 G B 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 4 OP2 G B 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 5 O5' G B 2 20.699 21.253 -5.745 1.00 52.33 O
ATOM 6 C5' G B 2 21.558 21.225 -4.611 1.00 40.65 C
ATOM 7 C4' G B 2 22.955 21.646 -4.996 1.00 37.70 C
ATOM 8 O4' G B 2 23.865 20.538 -4.758 1.00 38.24 O
ATOM 9 C3' G B 2 23.142 22.027 -6.464 1.00 35.55 C
ATOM 10 O3' G B 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 11 C2' G B 2 23.637 20.730 -7.088 1.00 40.44 C
ATOM 12 O2' G B 2 24.365 20.895 -8.289 1.00 40.81 O
ATOM 13 C1' G B 2 24.527 20.206 -5.965 1.00 38.73 C
ATOM 14 N9 G B 2 24.760 18.762 -6.003 1.00 34.49 N
ATOM 15 C8 G B 2 23.917 17.795 -6.493 1.00 33.74 C
ATOM 16 N7 G B 2 24.421 16.592 -6.394 1.00 36.90 N
ATOM 17 C5 G B 2 25.671 16.774 -5.805 1.00 35.10 C
ATOM 18 C6 G B 2 26.684 15.837 -5.442 1.00 37.24 C
ATOM 19 O6 G B 2 26.678 14.599 -5.573 1.00 42.89 O
ATOM 20 N1 G B 2 27.795 16.465 -4.874 1.00 31.79 N
ATOM 21 C2 G B 2 27.922 17.819 -4.676 1.00 30.75 C
ATOM 22 N2 G B 2 29.067 18.235 -4.108 1.00 32.48 N
ATOM 23 N3 G B 2 26.988 18.699 -5.005 1.00 32.46 N
ATOM 24 C4 G B 2 25.897 18.116 -5.563 1.00 35.99 C
ATOM 25 P U B 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 26 OP1 U B 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 27 OP2 U B 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 28 O5' U B 3 25.576 24.912 -7.245 1.00 42.33 O
TER
Atoms:
OP1: (27.771,28.798,-5.903)
OP2: (30.346,29.139,-6.011)
C3': (31.924,27.545,-3.218)
C1': (30.802,25.713,-2.144)
C5': (29.645,28.675,-3.102)
O4': (30.266,26.906,-1.621)
C8: (28.318,25.291,-2.388)
O2': (32.654,25.228,-3.666)
C6: (27.985,21.926,-3.331)
C5: (28.281,23.243,-2.947)
C4: (29.622,23.560,-2.784)
P: (29.154,28.311,-5.673)
C4': (30.787,28.057,-2.335)
C2': (31.552,26.081,-3.429)
C2: (30.278,21.521,-3.316)
N1: (29.025,21.069,-3.508)
N3: (30.684,22.742,-2.956)
N6: (26.735,21.500,-3.529)
N7: (27.466,24.342,-2.695)
N9: (29.632,24.883,-2.419)
O5': (29.245,27.809,-4.163)
O3': (33.169,27.651,-2.527)
OP2: (30.346,29.139,-6.011)
C3': (31.924,27.545,-3.218)
C1': (30.802,25.713,-2.144)
C5': (29.645,28.675,-3.102)
O4': (30.266,26.906,-1.621)
C8: (28.318,25.291,-2.388)
O2': (32.654,25.228,-3.666)
C6: (27.985,21.926,-3.331)
C5: (28.281,23.243,-2.947)
C4: (29.622,23.560,-2.784)
P: (29.154,28.311,-5.673)
C4': (30.787,28.057,-2.335)
C2': (31.552,26.081,-3.429)
C2: (30.278,21.521,-3.316)
N1: (29.025,21.069,-3.508)
N3: (30.684,22.742,-2.956)
N6: (26.735,21.500,-3.529)
N7: (27.466,24.342,-2.695)
N9: (29.632,24.883,-2.419)
O5': (29.245,27.809,-4.163)
O3': (33.169,27.651,-2.527)
OP1: (18.538,20.725,-6.931)
OP2: (20.264,18.892,-6.518)
C3': (23.142,22.027,-6.464)
C1': (24.527,20.206,-5.965)
C5': (21.558,21.225,-4.611)
O6: (26.678,14.599,-5.573)
O4': (23.865,20.538,-4.758)
C8: (23.917,17.795,-6.493)
C2: (27.922,17.819,-4.676)
C6: (26.684,15.837,-5.442)
C5: (25.671,16.774,-5.805)
C4: (25.897,18.116,-5.563)
P: (19.608,20.147,-6.078)
C4': (22.955,21.646,-4.996)
C2': (23.637,20.730,-7.088)
O2': (24.365,20.895,-8.289)
N1: (27.795,16.465,-4.874)
N2: (29.067,18.235,-4.108)
N3: (26.988,18.699,-5.005)
N7: (24.421,16.592,-6.394)
N9: (24.760,18.762,-6.003)
O5': (20.699,21.253,-5.745)
O3': (24.206,22.965,-6.549)
OP2: (20.264,18.892,-6.518)
C3': (23.142,22.027,-6.464)
C1': (24.527,20.206,-5.965)
C5': (21.558,21.225,-4.611)
O6: (26.678,14.599,-5.573)
O4': (23.865,20.538,-4.758)
C8: (23.917,17.795,-6.493)
C2: (27.922,17.819,-4.676)
C6: (26.684,15.837,-5.442)
C5: (25.671,16.774,-5.805)
C4: (25.897,18.116,-5.563)
P: (19.608,20.147,-6.078)
C4': (22.955,21.646,-4.996)
C2': (23.637,20.730,-7.088)
O2': (24.365,20.895,-8.289)
N1: (27.795,16.465,-4.874)
N2: (29.067,18.235,-4.108)
N3: (26.988,18.699,-5.005)
N7: (24.421,16.592,-6.394)
N9: (24.760,18.762,-6.003)
O5': (20.699,21.253,-5.745)
O3': (24.206,22.965,-6.549)
Image (generated by PyMOL):