ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A586:A282

Extra

PDB:
ATOM 1 O3' A A 585 0.387 43.114 83.520 1.00 74.95 O
ATOM 2 P A A 586 -1.081 42.941 82.917 1.00 95.47 P
ATOM 3 OP1 A A 586 -0.959 42.183 81.653 1.00 73.27 O
ATOM 4 OP2 A A 586 -1.732 44.269 82.911 1.00 83.93 O
ATOM 5 O5' A A 586 -1.811 42.030 84.019 1.00 82.03 O
ATOM 6 C5' A A 586 -1.300 40.733 84.341 1.00 78.16 C
ATOM 7 C4' A A 586 -1.963 40.100 85.561 1.00 69.81 C
ATOM 8 O4' A A 586 -1.569 40.787 86.780 1.00 69.30 O
ATOM 9 C3' A A 586 -3.489 40.125 85.567 1.00 74.06 C
ATOM 10 O3' A A 586 -4.030 39.031 84.837 1.00 73.48 O
ATOM 11 C2' A A 586 -3.810 40.057 87.059 1.00 72.62 C
ATOM 12 O2' A A 586 -3.759 38.760 87.608 1.00 80.41 O
ATOM 13 C1' A A 586 -2.696 40.928 87.632 1.00 76.80 C
ATOM 14 N9 A A 586 -3.129 42.324 87.673 1.00 72.12 N
ATOM 15 C8 A A 586 -2.765 43.344 86.840 1.00 70.32 C
ATOM 16 N7 A A 586 -3.342 44.485 87.123 1.00 60.48 N
ATOM 17 C5 A A 586 -4.144 44.199 88.212 1.00 59.10 C
ATOM 18 C6 A A 586 -5.017 44.988 88.989 1.00 71.68 C
ATOM 19 N6 A A 586 -5.238 46.294 88.779 1.00 64.75 N
ATOM 20 N1 A A 586 -5.663 44.374 90.005 1.00 79.28 N
ATOM 21 C2 A A 586 -5.452 43.071 90.220 1.00 68.40 C
ATOM 22 N3 A A 586 -4.657 42.237 89.555 1.00 69.98 N
ATOM 23 C4 A A 586 -4.028 42.870 88.557 1.00 61.92 C
ATOM 24 P A A 587 -5.067 39.360 83.669 1.00 79.24 P
ATOM 25 OP1 A A 587 -5.292 38.154 82.853 1.00 92.52 O
ATOM 26 OP2 A A 587 -4.621 40.602 83.016 1.00 80.34 O
ATOM 27 O5' A A 587 -6.378 39.704 84.503 1.00 64.89 O
TER

ATOM 1 O3' C B 281 -4.924 55.665 89.133 1.00 56.10 O
ATOM 2 P G B 282 -6.091 55.164 88.165 1.00 59.41 P
ATOM 3 OP1 G B 282 -5.896 55.759 86.824 1.00 64.09 O
ATOM 4 OP2 G B 282 -7.359 55.405 88.884 1.00 66.41 O
ATOM 5 O5' G B 282 -5.868 53.578 88.103 1.00 69.16 O
ATOM 6 C5' G B 282 -4.656 53.056 87.573 1.00 76.87 C
ATOM 7 C4' G B 282 -4.615 51.536 87.495 1.00 63.80 C
ATOM 8 O4' G B 282 -4.552 50.946 88.822 1.00 58.90 O
ATOM 9 C3' G B 282 -5.786 50.864 86.796 1.00 57.08 C
ATOM 10 O3' G B 282 -5.539 50.851 85.404 1.00 56.71 O
ATOM 11 C2' G B 282 -5.652 49.467 87.378 1.00 67.42 C
ATOM 12 O2' G B 282 -4.565 48.762 86.810 1.00 76.76 O
ATOM 13 C1' G B 282 -5.356 49.785 88.840 1.00 67.61 C
ATOM 14 N9 G B 282 -6.560 50.100 89.603 1.00 69.32 N
ATOM 15 C8 G B 282 -7.079 51.351 89.804 1.00 66.06 C
ATOM 16 N7 G B 282 -8.165 51.344 90.519 1.00 71.24 N
ATOM 17 C5 G B 282 -8.384 50.009 90.815 1.00 66.78 C
ATOM 18 C6 G B 282 -9.420 49.404 91.561 1.00 66.96 C
ATOM 19 O6 G B 282 -10.379 49.938 92.128 1.00 68.10 O
ATOM 20 N1 G B 282 -9.269 48.026 91.616 1.00 74.35 N
ATOM 21 C2 G B 282 -8.249 47.321 91.024 1.00 73.74 C
ATOM 22 N2 G B 282 -8.278 45.991 91.194 1.00 69.76 N
ATOM 23 N3 G B 282 -7.271 47.877 90.320 1.00 68.49 N
ATOM 24 C4 G B 282 -7.403 49.224 90.257 1.00 68.34 C
ATOM 25 P G B 283 -6.712 51.127 84.349 1.00 59.39 P
ATOM 26 OP1 G B 283 -6.164 50.918 82.988 1.00 52.35 O
ATOM 27 OP2 G B 283 -7.376 52.411 84.670 1.00 71.05 O
ATOM 28 O5' G B 283 -7.760 49.973 84.682 1.00 56.06 O
TER

Atoms:
OP1: (-0.959,42.183,81.653)
OP2: (-1.732,44.269,82.911)
C3': (-3.489,40.125,85.567)
C1': (-2.696,40.928,87.632)
C5': (-1.300,40.733,84.341)
O4': (-1.569,40.787,86.780)
C8: (-2.765,43.344,86.840)
O2': (-3.759,38.760,87.608)
C6: (-5.017,44.988,88.989)
C5: (-4.144,44.199,88.212)
C4: (-4.028,42.870,88.557)
P: (-1.081,42.941,82.917)
C4': (-1.963,40.100,85.561)
C2': (-3.810,40.057,87.059)
C2: (-5.452,43.071,90.220)
N1: (-5.663,44.374,90.005)
N3: (-4.657,42.237,89.555)
N6: (-5.238,46.294,88.779)
N7: (-3.342,44.485,87.123)
N9: (-3.129,42.324,87.673)
O5': (-1.811,42.030,84.019)
O3': (-4.030,39.031,84.837)
OP1: (-5.896,55.759,86.824)
OP2: (-7.359,55.405,88.884)
C3': (-5.786,50.864,86.796)
C1': (-5.356,49.785,88.840)
C5': (-4.656,53.056,87.573)
O6: (-10.379,49.938,92.128)
O4': (-4.552,50.946,88.822)
C8: (-7.079,51.351,89.804)
C2: (-8.249,47.321,91.024)
C6: (-9.420,49.404,91.561)
C5: (-8.384,50.009,90.815)
C4: (-7.403,49.224,90.257)
P: (-6.091,55.164,88.165)
C4': (-4.615,51.536,87.495)
C2': (-5.652,49.467,87.378)
O2': (-4.565,48.762,86.810)
N1: (-9.269,48.026,91.616)
N2: (-8.278,45.991,91.194)
N3: (-7.271,47.877,90.320)
N7: (-8.165,51.344,90.519)
N9: (-6.560,50.100,89.603)
O5': (-5.868,53.578,88.103)
O3': (-5.539,50.851,85.404)
Image (generated by PyMOL):
PyMOL image
show in jmol