ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A586:A282

Extra

PDB:
ATOM 1 O3' A A 585 1.834 42.280 85.423 1.00 45.11 O
ATOM 2 P A A 586 0.485 42.185 84.559 1.00 63.96 P
ATOM 3 OP1 A A 586 0.810 41.377 83.364 1.00 46.17 O
ATOM 4 OP2 A A 586 -0.089 43.546 84.388 1.00 48.03 O
ATOM 5 O5' A A 586 -0.505 41.353 85.488 1.00 30.96 O
ATOM 6 C5' A A 586 -0.182 40.012 85.878 1.00 27.08 C
ATOM 7 C4' A A 586 -0.993 39.603 87.081 1.00 24.84 C
ATOM 8 O4' A A 586 -0.665 40.464 88.205 1.00 23.54 O
ATOM 9 C3' A A 586 -2.500 39.730 86.963 1.00 24.35 C
ATOM 10 O3' A A 586 -3.112 38.654 86.298 1.00 25.05 O
ATOM 11 C2' A A 586 -2.944 39.805 88.415 1.00 24.87 C
ATOM 12 O2' A A 586 -3.056 38.539 89.044 1.00 25.94 O
ATOM 13 C1' A A 586 -1.808 40.616 89.039 1.00 24.23 C
ATOM 14 N9 A A 586 -2.171 42.033 89.106 1.00 18.59 N
ATOM 15 C8 A A 586 -1.672 43.092 88.402 1.00 18.59 C
ATOM 16 N7 A A 586 -2.263 44.228 88.672 1.00 18.59 N
ATOM 17 C5 A A 586 -3.208 43.892 89.627 1.00 18.59 C
ATOM 18 C6 A A 586 -4.171 44.652 90.323 1.00 18.59 C
ATOM 19 N6 A A 586 -4.363 45.960 90.137 1.00 18.59 N
ATOM 20 N1 A A 586 -4.948 44.013 91.222 1.00 18.59 N
ATOM 21 C2 A A 586 -4.773 42.702 91.391 1.00 18.59 C
ATOM 22 N3 A A 586 -3.914 41.878 90.788 1.00 18.59 N
ATOM 23 C4 A A 586 -3.152 42.548 89.911 1.00 18.59 C
ATOM 24 P A A 587 -4.435 38.929 85.441 1.00 31.32 P
ATOM 25 OP1 A A 587 -5.068 37.633 85.078 1.00 22.56 O
ATOM 26 OP2 A A 587 -4.049 39.879 84.383 1.00 23.84 O
ATOM 27 O5' A A 587 -5.428 39.641 86.458 1.00 37.25 O
TER

ATOM 1 O3' C B 281 -3.052 55.622 90.669 1.00 17.01 O
ATOM 2 P G B 282 -4.159 55.180 89.602 1.00 22.84 P
ATOM 3 OP1 G B 282 -3.732 55.692 88.270 1.00 21.25 O
ATOM 4 OP2 G B 282 -5.485 55.568 90.155 1.00 21.25 O
ATOM 5 O5' G B 282 -4.070 53.588 89.599 1.00 32.75 O
ATOM 6 C5' G B 282 -2.830 52.928 89.252 1.00 31.40 C
ATOM 7 C4' G B 282 -3.003 51.426 89.207 1.00 30.02 C
ATOM 8 O4' G B 282 -3.203 50.897 90.539 1.00 29.58 O
ATOM 9 C3' G B 282 -4.185 50.903 88.412 1.00 30.00 C
ATOM 10 O3' G B 282 -3.896 50.844 87.030 1.00 31.02 O
ATOM 11 C2' G B 282 -4.385 49.521 89.011 1.00 29.29 C
ATOM 12 O2' G B 282 -3.436 48.599 88.510 1.00 29.57 O
ATOM 13 C1' G B 282 -4.072 49.777 90.483 1.00 29.40 C
ATOM 14 N9 G B 282 -5.289 50.099 91.219 1.00 17.88 N
ATOM 15 C8 G B 282 -5.833 51.346 91.394 1.00 18.79 C
ATOM 16 N7 G B 282 -6.962 51.324 92.044 1.00 18.78 N
ATOM 17 C5 G B 282 -7.168 49.985 92.328 1.00 17.11 C
ATOM 18 C6 G B 282 -8.232 49.352 93.005 1.00 18.39 C
ATOM 19 O6 G B 282 -9.243 49.862 93.486 1.00 20.08 O
ATOM 20 N1 G B 282 -8.048 47.980 93.083 1.00 16.16 N
ATOM 21 C2 G B 282 -6.991 47.303 92.552 1.00 15.85 C
ATOM 22 N2 G B 282 -7.021 45.974 92.695 1.00 15.85 N
ATOM 23 N3 G B 282 -5.984 47.884 91.916 1.00 16.46 N
ATOM 24 C4 G B 282 -6.139 49.218 91.841 1.00 16.91 C
ATOM 25 P G B 283 -5.045 51.206 85.975 1.00 33.65 P
ATOM 26 OP1 G B 283 -4.423 51.158 84.618 1.00 34.46 O
ATOM 27 OP2 G B 283 -5.711 52.448 86.432 1.00 34.53 O
ATOM 28 O5' G B 283 -6.083 50.018 86.137 1.00 4.99 O
TER

Atoms:
OP1: (0.810,41.377,83.364)
OP2: (-0.089,43.546,84.388)
C3': (-2.500,39.730,86.963)
C1': (-1.808,40.616,89.039)
C5': (-0.182,40.012,85.878)
O4': (-0.665,40.464,88.205)
C8: (-1.672,43.092,88.402)
O2': (-3.056,38.539,89.044)
C6: (-4.171,44.652,90.323)
C5: (-3.208,43.892,89.627)
C4: (-3.152,42.548,89.911)
P: (0.485,42.185,84.559)
C4': (-0.993,39.603,87.081)
C2': (-2.944,39.805,88.415)
C2: (-4.773,42.702,91.391)
N1: (-4.948,44.013,91.222)
N3: (-3.914,41.878,90.788)
N6: (-4.363,45.960,90.137)
N7: (-2.263,44.228,88.672)
N9: (-2.171,42.033,89.106)
O5': (-0.505,41.353,85.488)
O3': (-3.112,38.654,86.298)
OP1: (-3.732,55.692,88.270)
OP2: (-5.485,55.568,90.155)
C3': (-4.185,50.903,88.412)
C1': (-4.072,49.777,90.483)
C5': (-2.830,52.928,89.252)
O6: (-9.243,49.862,93.486)
O4': (-3.203,50.897,90.539)
C8: (-5.833,51.346,91.394)
C2: (-6.991,47.303,92.552)
C6: (-8.232,49.352,93.005)
C5: (-7.168,49.985,92.328)
C4: (-6.139,49.218,91.841)
P: (-4.159,55.180,89.602)
C4': (-3.003,51.426,89.207)
C2': (-4.385,49.521,89.011)
O2': (-3.436,48.599,88.510)
N1: (-8.048,47.980,93.083)
N2: (-7.021,45.974,92.695)
N3: (-5.984,47.884,91.916)
N7: (-6.962,51.324,92.044)
N9: (-5.289,50.099,91.219)
O5': (-4.070,53.588,89.599)
O3': (-3.896,50.844,87.030)
Image (generated by PyMOL):
PyMOL image
show in jmol