Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y26:X53:X25
Extra
PDB:
ATOM 1 O3' A A 52 47.407 -34.363 -1.372 1.00 52.86 O
ATOM 2 P A A 53 46.046 -34.988 -0.827 1.00 54.37 P
ATOM 3 OP1 A A 53 46.459 -35.883 0.273 1.00 53.24 O
ATOM 4 OP2 A A 53 45.294 -35.535 -1.993 1.00 54.85 O
ATOM 5 O5' A A 53 45.262 -33.734 -0.212 1.00 53.21 O
ATOM 6 C5' A A 53 44.638 -32.751 -1.056 1.00 56.41 C
ATOM 7 C4' A A 53 45.064 -31.344 -0.672 1.00 57.42 C
ATOM 8 O4' A A 53 46.324 -31.052 -1.321 1.00 57.59 O
ATOM 9 C3' A A 53 44.183 -30.198 -1.154 1.00 58.72 C
ATOM 10 O3' A A 53 43.067 -29.957 -0.323 1.00 61.50 O
ATOM 11 C2' A A 53 45.174 -29.055 -0.991 1.00 58.39 C
ATOM 12 O2' A A 53 45.409 -28.741 0.372 1.00 58.78 O
ATOM 13 C1' A A 53 46.387 -29.676 -1.675 1.00 58.19 C
ATOM 14 N9 A A 53 46.239 -29.468 -3.116 1.00 58.02 N
ATOM 15 C8 A A 53 45.846 -30.364 -4.076 1.00 57.89 C
ATOM 16 N7 A A 53 45.790 -29.857 -5.293 1.00 58.44 N
ATOM 17 C5 A A 53 46.127 -28.526 -5.111 1.00 58.39 C
ATOM 18 C6 A A 53 46.224 -27.432 -5.997 1.00 58.15 C
ATOM 19 N6 A A 53 45.987 -27.525 -7.308 1.00 58.08 N
ATOM 20 N1 A A 53 46.598 -26.236 -5.485 1.00 58.18 N
ATOM 21 C2 A A 53 46.833 -26.119 -4.170 1.00 57.79 C
ATOM 22 N3 A A 53 46.760 -27.069 -3.242 1.00 57.97 N
ATOM 23 C4 A A 53 46.404 -28.263 -3.777 1.00 58.65 C
ATOM 24 P C A 54 41.535 -30.076 -0.787 1.00 64.34 P
ATOM 25 OP1 C A 54 40.815 -30.250 0.497 1.00 63.22 O
ATOM 26 OP2 C A 54 41.445 -31.040 -1.897 1.00 66.12 O
ATOM 27 O5' C A 54 40.913 -28.677 -1.222 1.00 64.25 O
TER
ATOM 1 O3' G B 24 41.820 -27.392 -15.145 1.00 58.08 O
ATOM 2 P G B 25 40.486 -26.913 -14.408 1.00 57.95 P
ATOM 3 OP1 G B 25 39.483 -27.941 -14.757 1.00 60.81 O
ATOM 4 OP2 G B 25 40.233 -25.487 -14.695 1.00 61.93 O
ATOM 5 O5' G B 25 40.805 -26.985 -12.845 1.00 60.65 O
ATOM 6 C5' G B 25 40.799 -28.207 -12.135 1.00 57.65 C
ATOM 7 C4' G B 25 41.169 -27.914 -10.699 1.00 56.96 C
ATOM 8 O4' G B 25 42.523 -27.426 -10.671 1.00 56.83 O
ATOM 9 C3' G B 25 40.383 -26.811 -10.013 1.00 56.86 C
ATOM 10 O3' G B 25 39.194 -27.352 -9.473 1.00 60.88 O
ATOM 11 C2' G B 25 41.359 -26.340 -8.929 1.00 55.33 C
ATOM 12 O2' G B 25 41.269 -26.999 -7.676 1.00 54.41 O
ATOM 13 C1' G B 25 42.727 -26.558 -9.578 1.00 53.60 C
ATOM 14 N9 G B 25 43.209 -25.260 -10.064 1.00 53.12 N
ATOM 15 C8 G B 25 42.760 -24.569 -11.162 1.00 52.65 C
ATOM 16 N7 G B 25 43.323 -23.411 -11.312 1.00 51.89 N
ATOM 17 C5 G B 25 44.189 -23.299 -10.239 1.00 52.42 C
ATOM 18 C6 G B 25 45.079 -22.251 -9.891 1.00 52.27 C
ATOM 19 O6 G B 25 45.251 -21.181 -10.504 1.00 52.43 O
ATOM 20 N1 G B 25 45.793 -22.532 -8.720 1.00 52.32 N
ATOM 21 C2 G B 25 45.643 -23.708 -7.989 1.00 52.63 C
ATOM 22 N2 G B 25 46.378 -23.852 -6.879 1.00 53.03 N
ATOM 23 N3 G B 25 44.818 -24.692 -8.317 1.00 50.52 N
ATOM 24 C4 G B 25 44.129 -24.436 -9.455 1.00 52.11 C
ATOM 25 P U B 26 37.844 -26.488 -9.425 1.00 62.58 P
ATOM 26 OP1 U B 26 38.200 -25.124 -9.893 1.00 60.57 O
ATOM 27 OP2 U B 26 37.257 -26.740 -8.080 1.00 61.16 O
ATOM 28 O5' U B 26 36.912 -27.151 -10.549 1.00 61.76 O
TER
ATOM 2 P A A 53 46.046 -34.988 -0.827 1.00 54.37 P
ATOM 3 OP1 A A 53 46.459 -35.883 0.273 1.00 53.24 O
ATOM 4 OP2 A A 53 45.294 -35.535 -1.993 1.00 54.85 O
ATOM 5 O5' A A 53 45.262 -33.734 -0.212 1.00 53.21 O
ATOM 6 C5' A A 53 44.638 -32.751 -1.056 1.00 56.41 C
ATOM 7 C4' A A 53 45.064 -31.344 -0.672 1.00 57.42 C
ATOM 8 O4' A A 53 46.324 -31.052 -1.321 1.00 57.59 O
ATOM 9 C3' A A 53 44.183 -30.198 -1.154 1.00 58.72 C
ATOM 10 O3' A A 53 43.067 -29.957 -0.323 1.00 61.50 O
ATOM 11 C2' A A 53 45.174 -29.055 -0.991 1.00 58.39 C
ATOM 12 O2' A A 53 45.409 -28.741 0.372 1.00 58.78 O
ATOM 13 C1' A A 53 46.387 -29.676 -1.675 1.00 58.19 C
ATOM 14 N9 A A 53 46.239 -29.468 -3.116 1.00 58.02 N
ATOM 15 C8 A A 53 45.846 -30.364 -4.076 1.00 57.89 C
ATOM 16 N7 A A 53 45.790 -29.857 -5.293 1.00 58.44 N
ATOM 17 C5 A A 53 46.127 -28.526 -5.111 1.00 58.39 C
ATOM 18 C6 A A 53 46.224 -27.432 -5.997 1.00 58.15 C
ATOM 19 N6 A A 53 45.987 -27.525 -7.308 1.00 58.08 N
ATOM 20 N1 A A 53 46.598 -26.236 -5.485 1.00 58.18 N
ATOM 21 C2 A A 53 46.833 -26.119 -4.170 1.00 57.79 C
ATOM 22 N3 A A 53 46.760 -27.069 -3.242 1.00 57.97 N
ATOM 23 C4 A A 53 46.404 -28.263 -3.777 1.00 58.65 C
ATOM 24 P C A 54 41.535 -30.076 -0.787 1.00 64.34 P
ATOM 25 OP1 C A 54 40.815 -30.250 0.497 1.00 63.22 O
ATOM 26 OP2 C A 54 41.445 -31.040 -1.897 1.00 66.12 O
ATOM 27 O5' C A 54 40.913 -28.677 -1.222 1.00 64.25 O
TER
ATOM 1 O3' G B 24 41.820 -27.392 -15.145 1.00 58.08 O
ATOM 2 P G B 25 40.486 -26.913 -14.408 1.00 57.95 P
ATOM 3 OP1 G B 25 39.483 -27.941 -14.757 1.00 60.81 O
ATOM 4 OP2 G B 25 40.233 -25.487 -14.695 1.00 61.93 O
ATOM 5 O5' G B 25 40.805 -26.985 -12.845 1.00 60.65 O
ATOM 6 C5' G B 25 40.799 -28.207 -12.135 1.00 57.65 C
ATOM 7 C4' G B 25 41.169 -27.914 -10.699 1.00 56.96 C
ATOM 8 O4' G B 25 42.523 -27.426 -10.671 1.00 56.83 O
ATOM 9 C3' G B 25 40.383 -26.811 -10.013 1.00 56.86 C
ATOM 10 O3' G B 25 39.194 -27.352 -9.473 1.00 60.88 O
ATOM 11 C2' G B 25 41.359 -26.340 -8.929 1.00 55.33 C
ATOM 12 O2' G B 25 41.269 -26.999 -7.676 1.00 54.41 O
ATOM 13 C1' G B 25 42.727 -26.558 -9.578 1.00 53.60 C
ATOM 14 N9 G B 25 43.209 -25.260 -10.064 1.00 53.12 N
ATOM 15 C8 G B 25 42.760 -24.569 -11.162 1.00 52.65 C
ATOM 16 N7 G B 25 43.323 -23.411 -11.312 1.00 51.89 N
ATOM 17 C5 G B 25 44.189 -23.299 -10.239 1.00 52.42 C
ATOM 18 C6 G B 25 45.079 -22.251 -9.891 1.00 52.27 C
ATOM 19 O6 G B 25 45.251 -21.181 -10.504 1.00 52.43 O
ATOM 20 N1 G B 25 45.793 -22.532 -8.720 1.00 52.32 N
ATOM 21 C2 G B 25 45.643 -23.708 -7.989 1.00 52.63 C
ATOM 22 N2 G B 25 46.378 -23.852 -6.879 1.00 53.03 N
ATOM 23 N3 G B 25 44.818 -24.692 -8.317 1.00 50.52 N
ATOM 24 C4 G B 25 44.129 -24.436 -9.455 1.00 52.11 C
ATOM 25 P U B 26 37.844 -26.488 -9.425 1.00 62.58 P
ATOM 26 OP1 U B 26 38.200 -25.124 -9.893 1.00 60.57 O
ATOM 27 OP2 U B 26 37.257 -26.740 -8.080 1.00 61.16 O
ATOM 28 O5' U B 26 36.912 -27.151 -10.549 1.00 61.76 O
TER
Atoms:
OP1: (46.459,-35.883,0.273)
OP2: (45.294,-35.535,-1.993)
C3': (44.183,-30.198,-1.154)
C1': (46.387,-29.676,-1.675)
C5': (44.638,-32.751,-1.056)
O4': (46.324,-31.052,-1.321)
C8: (45.846,-30.364,-4.076)
O2': (45.409,-28.741,0.372)
C6: (46.224,-27.432,-5.997)
C5: (46.127,-28.526,-5.111)
C4: (46.404,-28.263,-3.777)
P: (46.046,-34.988,-0.827)
C4': (45.064,-31.344,-0.672)
C2': (45.174,-29.055,-0.991)
C2: (46.833,-26.119,-4.170)
N1: (46.598,-26.236,-5.485)
N3: (46.760,-27.069,-3.242)
N6: (45.987,-27.525,-7.308)
N7: (45.790,-29.857,-5.293)
N9: (46.239,-29.468,-3.116)
O5': (45.262,-33.734,-0.212)
O3': (43.067,-29.957,-0.323)
OP2: (45.294,-35.535,-1.993)
C3': (44.183,-30.198,-1.154)
C1': (46.387,-29.676,-1.675)
C5': (44.638,-32.751,-1.056)
O4': (46.324,-31.052,-1.321)
C8: (45.846,-30.364,-4.076)
O2': (45.409,-28.741,0.372)
C6: (46.224,-27.432,-5.997)
C5: (46.127,-28.526,-5.111)
C4: (46.404,-28.263,-3.777)
P: (46.046,-34.988,-0.827)
C4': (45.064,-31.344,-0.672)
C2': (45.174,-29.055,-0.991)
C2: (46.833,-26.119,-4.170)
N1: (46.598,-26.236,-5.485)
N3: (46.760,-27.069,-3.242)
N6: (45.987,-27.525,-7.308)
N7: (45.790,-29.857,-5.293)
N9: (46.239,-29.468,-3.116)
O5': (45.262,-33.734,-0.212)
O3': (43.067,-29.957,-0.323)
OP1: (39.483,-27.941,-14.757)
OP2: (40.233,-25.487,-14.695)
C3': (40.383,-26.811,-10.013)
C1': (42.727,-26.558,-9.578)
C5': (40.799,-28.207,-12.135)
O6: (45.251,-21.181,-10.504)
O4': (42.523,-27.426,-10.671)
C8: (42.760,-24.569,-11.162)
C2: (45.643,-23.708,-7.989)
C6: (45.079,-22.251,-9.891)
C5: (44.189,-23.299,-10.239)
C4: (44.129,-24.436,-9.455)
P: (40.486,-26.913,-14.408)
C4': (41.169,-27.914,-10.699)
C2': (41.359,-26.340,-8.929)
O2': (41.269,-26.999,-7.676)
N1: (45.793,-22.532,-8.720)
N2: (46.378,-23.852,-6.879)
N3: (44.818,-24.692,-8.317)
N7: (43.323,-23.411,-11.312)
N9: (43.209,-25.260,-10.064)
O5': (40.805,-26.985,-12.845)
O3': (39.194,-27.352,-9.473)
OP2: (40.233,-25.487,-14.695)
C3': (40.383,-26.811,-10.013)
C1': (42.727,-26.558,-9.578)
C5': (40.799,-28.207,-12.135)
O6: (45.251,-21.181,-10.504)
O4': (42.523,-27.426,-10.671)
C8: (42.760,-24.569,-11.162)
C2: (45.643,-23.708,-7.989)
C6: (45.079,-22.251,-9.891)
C5: (44.189,-23.299,-10.239)
C4: (44.129,-24.436,-9.455)
P: (40.486,-26.913,-14.408)
C4': (41.169,-27.914,-10.699)
C2': (41.359,-26.340,-8.929)
O2': (41.269,-26.999,-7.676)
N1: (45.793,-22.532,-8.720)
N2: (46.378,-23.852,-6.879)
N3: (44.818,-24.692,-8.317)
N7: (43.323,-23.411,-11.312)
N9: (43.209,-25.260,-10.064)
O5': (40.805,-26.985,-12.845)
O3': (39.194,-27.352,-9.473)
Image (generated by PyMOL):