Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A8:A31
Extra
PDB:
ATOM 1 O3' U A 7 -14.083 -5.443 3.527 1.00 36.80 O
ATOM 2 P A A 8 -14.473 -3.908 3.237 1.00 37.11 P
ATOM 3 OP1 A A 8 -13.868 -3.516 1.929 1.00 39.52 O
ATOM 4 OP2 A A 8 -14.216 -3.061 4.449 1.00 37.31 O
ATOM 5 O5' A A 8 -16.046 -3.961 2.977 1.00 37.24 O
ATOM 6 C5' A A 8 -16.917 -4.709 3.839 1.00 35.84 C
ATOM 7 C4' A A 8 -18.185 -5.070 3.099 1.00 34.89 C
ATOM 8 O4' A A 8 -17.832 -5.709 1.862 1.00 33.17 O
ATOM 9 C3' A A 8 -19.078 -6.091 3.787 1.00 32.88 C
ATOM 10 O3' A A 8 -19.930 -5.387 4.680 1.00 33.33 O
ATOM 11 C2' A A 8 -19.875 -6.677 2.628 1.00 33.68 C
ATOM 12 O2' A A 8 -21.069 -5.972 2.351 1.00 33.76 O
ATOM 13 C1' A A 8 -18.892 -6.559 1.461 1.00 32.67 C
ATOM 14 N9 A A 8 -18.323 -7.832 1.060 1.00 30.76 N
ATOM 15 C8 A A 8 -18.077 -8.228 -0.232 1.00 32.47 C
ATOM 16 N7 A A 8 -17.587 -9.432 -0.334 1.00 31.14 N
ATOM 17 C5 A A 8 -17.506 -9.870 0.975 1.00 30.46 C
ATOM 18 C6 A A 8 -17.081 -11.075 1.511 1.00 29.66 C
ATOM 19 N6 A A 8 -16.702 -12.107 0.751 1.00 28.62 N
ATOM 20 N1 A A 8 -17.078 -11.206 2.866 1.00 29.62 N
ATOM 21 C2 A A 8 -17.510 -10.164 3.609 1.00 29.27 C
ATOM 22 N3 A A 8 -17.964 -8.967 3.198 1.00 30.96 N
ATOM 23 C4 A A 8 -17.936 -8.890 1.853 1.00 30.67 C
ATOM 24 P A A 9 -19.780 -5.610 6.281 1.00 32.84 P
ATOM 25 OP1 A A 9 -20.654 -4.575 6.915 1.00 32.37 O
ATOM 26 OP2 A A 9 -18.348 -5.637 6.614 1.00 32.38 O
ATOM 27 O5' A A 9 -20.396 -7.081 6.447 1.00 31.83 O
TER
ATOM 1 O3' A B 30 -14.782 -19.597 -3.904 1.00 44.52 O
ATOM 2 P G B 31 -13.334 -18.937 -3.787 1.00 44.17 P
ATOM 3 OP1 G B 31 -12.863 -18.798 -5.197 1.00 45.08 O
ATOM 4 OP2 G B 31 -12.455 -19.625 -2.779 1.00 42.71 O
ATOM 5 O5' G B 31 -13.685 -17.483 -3.250 1.00 42.29 O
ATOM 6 C5' G B 31 -14.672 -16.678 -3.901 1.00 40.48 C
ATOM 7 C4' G B 31 -14.943 -15.430 -3.085 1.00 38.47 C
ATOM 8 O4' G B 31 -15.795 -15.798 -1.974 1.00 38.35 O
ATOM 9 C3' G B 31 -13.725 -14.800 -2.409 1.00 38.27 C
ATOM 10 O3' G B 31 -13.016 -13.911 -3.277 1.00 38.79 O
ATOM 11 C2' G B 31 -14.377 -14.032 -1.256 1.00 37.75 C
ATOM 12 O2' G B 31 -15.034 -12.842 -1.654 1.00 35.55 O
ATOM 13 C1' G B 31 -15.459 -15.017 -0.828 1.00 36.68 C
ATOM 14 N9 G B 31 -15.072 -15.907 0.262 1.00 35.66 N
ATOM 15 C8 G B 31 -14.444 -17.130 0.155 1.00 35.04 C
ATOM 16 N7 G B 31 -14.257 -17.714 1.315 1.00 32.86 N
ATOM 17 C5 G B 31 -14.790 -16.827 2.246 1.00 33.56 C
ATOM 18 C6 G B 31 -14.872 -16.933 3.669 1.00 34.13 C
ATOM 19 O6 G B 31 -14.450 -17.864 4.406 1.00 31.35 O
ATOM 20 N1 G B 31 -15.499 -15.817 4.231 1.00 33.11 N
ATOM 21 C2 G B 31 -15.973 -14.730 3.532 1.00 32.43 C
ATOM 22 N2 G B 31 -16.548 -13.745 4.279 1.00 27.46 N
ATOM 23 N3 G B 31 -15.886 -14.615 2.193 1.00 31.64 N
ATOM 24 C4 G B 31 -15.289 -15.699 1.626 1.00 33.41 C
ATOM 25 P U B 32 -11.422 -14.070 -3.470 1.00 37.69 P
ATOM 26 OP1 U B 32 -11.213 -13.270 -4.702 1.00 39.98 O
ATOM 27 OP2 U B 32 -11.032 -15.500 -3.461 1.00 39.07 O
ATOM 28 O5' U B 32 -10.780 -13.357 -2.205 1.00 38.47 O
TER
ATOM 2 P A A 8 -14.473 -3.908 3.237 1.00 37.11 P
ATOM 3 OP1 A A 8 -13.868 -3.516 1.929 1.00 39.52 O
ATOM 4 OP2 A A 8 -14.216 -3.061 4.449 1.00 37.31 O
ATOM 5 O5' A A 8 -16.046 -3.961 2.977 1.00 37.24 O
ATOM 6 C5' A A 8 -16.917 -4.709 3.839 1.00 35.84 C
ATOM 7 C4' A A 8 -18.185 -5.070 3.099 1.00 34.89 C
ATOM 8 O4' A A 8 -17.832 -5.709 1.862 1.00 33.17 O
ATOM 9 C3' A A 8 -19.078 -6.091 3.787 1.00 32.88 C
ATOM 10 O3' A A 8 -19.930 -5.387 4.680 1.00 33.33 O
ATOM 11 C2' A A 8 -19.875 -6.677 2.628 1.00 33.68 C
ATOM 12 O2' A A 8 -21.069 -5.972 2.351 1.00 33.76 O
ATOM 13 C1' A A 8 -18.892 -6.559 1.461 1.00 32.67 C
ATOM 14 N9 A A 8 -18.323 -7.832 1.060 1.00 30.76 N
ATOM 15 C8 A A 8 -18.077 -8.228 -0.232 1.00 32.47 C
ATOM 16 N7 A A 8 -17.587 -9.432 -0.334 1.00 31.14 N
ATOM 17 C5 A A 8 -17.506 -9.870 0.975 1.00 30.46 C
ATOM 18 C6 A A 8 -17.081 -11.075 1.511 1.00 29.66 C
ATOM 19 N6 A A 8 -16.702 -12.107 0.751 1.00 28.62 N
ATOM 20 N1 A A 8 -17.078 -11.206 2.866 1.00 29.62 N
ATOM 21 C2 A A 8 -17.510 -10.164 3.609 1.00 29.27 C
ATOM 22 N3 A A 8 -17.964 -8.967 3.198 1.00 30.96 N
ATOM 23 C4 A A 8 -17.936 -8.890 1.853 1.00 30.67 C
ATOM 24 P A A 9 -19.780 -5.610 6.281 1.00 32.84 P
ATOM 25 OP1 A A 9 -20.654 -4.575 6.915 1.00 32.37 O
ATOM 26 OP2 A A 9 -18.348 -5.637 6.614 1.00 32.38 O
ATOM 27 O5' A A 9 -20.396 -7.081 6.447 1.00 31.83 O
TER
ATOM 1 O3' A B 30 -14.782 -19.597 -3.904 1.00 44.52 O
ATOM 2 P G B 31 -13.334 -18.937 -3.787 1.00 44.17 P
ATOM 3 OP1 G B 31 -12.863 -18.798 -5.197 1.00 45.08 O
ATOM 4 OP2 G B 31 -12.455 -19.625 -2.779 1.00 42.71 O
ATOM 5 O5' G B 31 -13.685 -17.483 -3.250 1.00 42.29 O
ATOM 6 C5' G B 31 -14.672 -16.678 -3.901 1.00 40.48 C
ATOM 7 C4' G B 31 -14.943 -15.430 -3.085 1.00 38.47 C
ATOM 8 O4' G B 31 -15.795 -15.798 -1.974 1.00 38.35 O
ATOM 9 C3' G B 31 -13.725 -14.800 -2.409 1.00 38.27 C
ATOM 10 O3' G B 31 -13.016 -13.911 -3.277 1.00 38.79 O
ATOM 11 C2' G B 31 -14.377 -14.032 -1.256 1.00 37.75 C
ATOM 12 O2' G B 31 -15.034 -12.842 -1.654 1.00 35.55 O
ATOM 13 C1' G B 31 -15.459 -15.017 -0.828 1.00 36.68 C
ATOM 14 N9 G B 31 -15.072 -15.907 0.262 1.00 35.66 N
ATOM 15 C8 G B 31 -14.444 -17.130 0.155 1.00 35.04 C
ATOM 16 N7 G B 31 -14.257 -17.714 1.315 1.00 32.86 N
ATOM 17 C5 G B 31 -14.790 -16.827 2.246 1.00 33.56 C
ATOM 18 C6 G B 31 -14.872 -16.933 3.669 1.00 34.13 C
ATOM 19 O6 G B 31 -14.450 -17.864 4.406 1.00 31.35 O
ATOM 20 N1 G B 31 -15.499 -15.817 4.231 1.00 33.11 N
ATOM 21 C2 G B 31 -15.973 -14.730 3.532 1.00 32.43 C
ATOM 22 N2 G B 31 -16.548 -13.745 4.279 1.00 27.46 N
ATOM 23 N3 G B 31 -15.886 -14.615 2.193 1.00 31.64 N
ATOM 24 C4 G B 31 -15.289 -15.699 1.626 1.00 33.41 C
ATOM 25 P U B 32 -11.422 -14.070 -3.470 1.00 37.69 P
ATOM 26 OP1 U B 32 -11.213 -13.270 -4.702 1.00 39.98 O
ATOM 27 OP2 U B 32 -11.032 -15.500 -3.461 1.00 39.07 O
ATOM 28 O5' U B 32 -10.780 -13.357 -2.205 1.00 38.47 O
TER
Atoms:
OP1: (-13.868,-3.516,1.929)
OP2: (-14.216,-3.061,4.449)
C3': (-19.078,-6.091,3.787)
C1': (-18.892,-6.559,1.461)
C5': (-16.917,-4.709,3.839)
O4': (-17.832,-5.709,1.862)
C8: (-18.077,-8.228,-0.232)
O2': (-21.069,-5.972,2.351)
C6: (-17.081,-11.075,1.511)
C5: (-17.506,-9.870,0.975)
C4: (-17.936,-8.890,1.853)
P: (-14.473,-3.908,3.237)
C4': (-18.185,-5.070,3.099)
C2': (-19.875,-6.677,2.628)
C2: (-17.510,-10.164,3.609)
N1: (-17.078,-11.206,2.866)
N3: (-17.964,-8.967,3.198)
N6: (-16.702,-12.107,0.751)
N7: (-17.587,-9.432,-0.334)
N9: (-18.323,-7.832,1.060)
O5': (-16.046,-3.961,2.977)
O3': (-19.930,-5.387,4.680)
OP2: (-14.216,-3.061,4.449)
C3': (-19.078,-6.091,3.787)
C1': (-18.892,-6.559,1.461)
C5': (-16.917,-4.709,3.839)
O4': (-17.832,-5.709,1.862)
C8: (-18.077,-8.228,-0.232)
O2': (-21.069,-5.972,2.351)
C6: (-17.081,-11.075,1.511)
C5: (-17.506,-9.870,0.975)
C4: (-17.936,-8.890,1.853)
P: (-14.473,-3.908,3.237)
C4': (-18.185,-5.070,3.099)
C2': (-19.875,-6.677,2.628)
C2: (-17.510,-10.164,3.609)
N1: (-17.078,-11.206,2.866)
N3: (-17.964,-8.967,3.198)
N6: (-16.702,-12.107,0.751)
N7: (-17.587,-9.432,-0.334)
N9: (-18.323,-7.832,1.060)
O5': (-16.046,-3.961,2.977)
O3': (-19.930,-5.387,4.680)
OP1: (-12.863,-18.798,-5.197)
OP2: (-12.455,-19.625,-2.779)
C3': (-13.725,-14.800,-2.409)
C1': (-15.459,-15.017,-0.828)
C5': (-14.672,-16.678,-3.901)
O6: (-14.450,-17.864,4.406)
O4': (-15.795,-15.798,-1.974)
C8: (-14.444,-17.130,0.155)
C2: (-15.973,-14.730,3.532)
C6: (-14.872,-16.933,3.669)
C5: (-14.790,-16.827,2.246)
C4: (-15.289,-15.699,1.626)
P: (-13.334,-18.937,-3.787)
C4': (-14.943,-15.430,-3.085)
C2': (-14.377,-14.032,-1.256)
O2': (-15.034,-12.842,-1.654)
N1: (-15.499,-15.817,4.231)
N2: (-16.548,-13.745,4.279)
N3: (-15.886,-14.615,2.193)
N7: (-14.257,-17.714,1.315)
N9: (-15.072,-15.907,0.262)
O5': (-13.685,-17.483,-3.250)
O3': (-13.016,-13.911,-3.277)
OP2: (-12.455,-19.625,-2.779)
C3': (-13.725,-14.800,-2.409)
C1': (-15.459,-15.017,-0.828)
C5': (-14.672,-16.678,-3.901)
O6: (-14.450,-17.864,4.406)
O4': (-15.795,-15.798,-1.974)
C8: (-14.444,-17.130,0.155)
C2: (-15.973,-14.730,3.532)
C6: (-14.872,-16.933,3.669)
C5: (-14.790,-16.827,2.246)
C4: (-15.289,-15.699,1.626)
P: (-13.334,-18.937,-3.787)
C4': (-14.943,-15.430,-3.085)
C2': (-14.377,-14.032,-1.256)
O2': (-15.034,-12.842,-1.654)
N1: (-15.499,-15.817,4.231)
N2: (-16.548,-13.745,4.279)
N3: (-15.886,-14.615,2.193)
N7: (-14.257,-17.714,1.315)
N9: (-15.072,-15.907,0.262)
O5': (-13.685,-17.483,-3.250)
O3': (-13.016,-13.911,-3.277)
Image (generated by PyMOL):