Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A8:A31
Extra
PDB:
ATOM 1 O3' U A 7 14.183 6.395 3.368 1.00 25.57 O
ATOM 2 P A A 8 14.490 4.836 3.140 1.00 26.53 P
ATOM 3 OP1 A A 8 13.781 4.406 1.900 1.00 27.40 O
ATOM 4 OP2 A A 8 14.241 4.119 4.415 1.00 27.84 O
ATOM 5 O5' A A 8 16.051 4.794 2.833 1.00 26.22 O
ATOM 6 C5' A A 8 16.982 5.469 3.675 1.00 25.79 C
ATOM 7 C4' A A 8 18.202 5.875 2.882 1.00 24.67 C
ATOM 8 O4' A A 8 17.782 6.537 1.668 1.00 24.80 O
ATOM 9 C3' A A 8 19.103 6.905 3.544 1.00 24.42 C
ATOM 10 O3' A A 8 20.011 6.264 4.429 1.00 24.10 O
ATOM 11 C2' A A 8 19.854 7.501 2.355 1.00 24.40 C
ATOM 12 O2' A A 8 21.009 6.756 2.023 1.00 25.72 O
ATOM 13 C1' A A 8 18.820 7.392 1.228 1.00 23.84 C
ATOM 14 N9 A A 8 18.231 8.671 0.834 1.00 22.69 N
ATOM 15 C8 A A 8 17.943 9.088 -0.443 1.00 22.20 C
ATOM 16 N7 A A 8 17.438 10.294 -0.503 1.00 21.42 N
ATOM 17 C5 A A 8 17.387 10.701 0.824 1.00 21.88 C
ATOM 18 C6 A A 8 16.951 11.889 1.429 1.00 20.97 C
ATOM 19 N6 A A 8 16.475 12.933 0.748 1.00 22.39 N
ATOM 20 N1 A A 8 17.025 11.974 2.774 1.00 20.87 N
ATOM 21 C2 A A 8 17.509 10.927 3.456 1.00 20.90 C
ATOM 22 N3 A A 8 17.954 9.758 3.000 1.00 21.61 N
ATOM 23 C4 A A 8 17.866 9.708 1.659 1.00 21.81 C
ATOM 24 P A A 9 19.831 6.428 6.018 1.00 23.02 P
ATOM 25 OP1 A A 9 20.720 5.436 6.678 1.00 23.63 O
ATOM 26 OP2 A A 9 18.378 6.419 6.314 1.00 23.18 O
ATOM 27 O5' A A 9 20.405 7.882 6.331 1.00 22.61 O
TER
ATOM 1 O3' A B 30 14.432 20.737 -3.910 1.00 30.03 O
ATOM 2 P G B 31 13.087 19.871 -3.770 1.00 29.50 P
ATOM 3 OP1 G B 31 12.558 19.624 -5.136 1.00 29.61 O
ATOM 4 OP2 G B 31 12.228 20.529 -2.754 1.00 29.08 O
ATOM 5 O5' G B 31 13.577 18.479 -3.174 1.00 28.71 O
ATOM 6 C5' G B 31 14.286 17.548 -3.981 1.00 27.62 C
ATOM 7 C4' G B 31 14.614 16.309 -3.184 1.00 26.56 C
ATOM 8 O4' G B 31 15.528 16.659 -2.111 1.00 26.47 O
ATOM 9 C3' G B 31 13.440 15.654 -2.475 1.00 26.55 C
ATOM 10 O3' G B 31 12.764 14.764 -3.357 1.00 27.05 O
ATOM 11 C2' G B 31 14.145 14.886 -1.362 1.00 25.66 C
ATOM 12 O2' G B 31 14.750 13.692 -1.819 1.00 25.16 O
ATOM 13 C1' G B 31 15.239 15.876 -0.962 1.00 24.88 C
ATOM 14 N9 G B 31 14.858 16.781 0.118 1.00 24.02 N
ATOM 15 C8 G B 31 14.192 17.975 -0.004 1.00 23.28 C
ATOM 16 N7 G B 31 14.013 18.581 1.138 1.00 22.97 N
ATOM 17 C5 G B 31 14.588 17.731 2.074 1.00 23.35 C
ATOM 18 C6 G B 31 14.704 17.859 3.489 1.00 23.49 C
ATOM 19 O6 G B 31 14.306 18.781 4.220 1.00 23.56 O
ATOM 20 N1 G B 31 15.365 16.769 4.047 1.00 22.65 N
ATOM 21 C2 G B 31 15.854 15.696 3.342 1.00 22.56 C
ATOM 22 N2 G B 31 16.472 14.748 4.062 1.00 21.05 N
ATOM 23 N3 G B 31 15.748 15.564 2.026 1.00 23.00 N
ATOM 24 C4 G B 31 15.109 16.612 1.462 1.00 23.27 C
ATOM 25 P U B 32 11.190 14.959 -3.647 1.00 27.66 P
ATOM 26 OP1 U B 32 10.917 14.174 -4.877 1.00 28.59 O
ATOM 27 OP2 U B 32 10.854 16.400 -3.610 1.00 27.64 O
ATOM 28 O5' U B 32 10.468 14.245 -2.417 1.00 28.13 O
TER
ATOM 2 P A A 8 14.490 4.836 3.140 1.00 26.53 P
ATOM 3 OP1 A A 8 13.781 4.406 1.900 1.00 27.40 O
ATOM 4 OP2 A A 8 14.241 4.119 4.415 1.00 27.84 O
ATOM 5 O5' A A 8 16.051 4.794 2.833 1.00 26.22 O
ATOM 6 C5' A A 8 16.982 5.469 3.675 1.00 25.79 C
ATOM 7 C4' A A 8 18.202 5.875 2.882 1.00 24.67 C
ATOM 8 O4' A A 8 17.782 6.537 1.668 1.00 24.80 O
ATOM 9 C3' A A 8 19.103 6.905 3.544 1.00 24.42 C
ATOM 10 O3' A A 8 20.011 6.264 4.429 1.00 24.10 O
ATOM 11 C2' A A 8 19.854 7.501 2.355 1.00 24.40 C
ATOM 12 O2' A A 8 21.009 6.756 2.023 1.00 25.72 O
ATOM 13 C1' A A 8 18.820 7.392 1.228 1.00 23.84 C
ATOM 14 N9 A A 8 18.231 8.671 0.834 1.00 22.69 N
ATOM 15 C8 A A 8 17.943 9.088 -0.443 1.00 22.20 C
ATOM 16 N7 A A 8 17.438 10.294 -0.503 1.00 21.42 N
ATOM 17 C5 A A 8 17.387 10.701 0.824 1.00 21.88 C
ATOM 18 C6 A A 8 16.951 11.889 1.429 1.00 20.97 C
ATOM 19 N6 A A 8 16.475 12.933 0.748 1.00 22.39 N
ATOM 20 N1 A A 8 17.025 11.974 2.774 1.00 20.87 N
ATOM 21 C2 A A 8 17.509 10.927 3.456 1.00 20.90 C
ATOM 22 N3 A A 8 17.954 9.758 3.000 1.00 21.61 N
ATOM 23 C4 A A 8 17.866 9.708 1.659 1.00 21.81 C
ATOM 24 P A A 9 19.831 6.428 6.018 1.00 23.02 P
ATOM 25 OP1 A A 9 20.720 5.436 6.678 1.00 23.63 O
ATOM 26 OP2 A A 9 18.378 6.419 6.314 1.00 23.18 O
ATOM 27 O5' A A 9 20.405 7.882 6.331 1.00 22.61 O
TER
ATOM 1 O3' A B 30 14.432 20.737 -3.910 1.00 30.03 O
ATOM 2 P G B 31 13.087 19.871 -3.770 1.00 29.50 P
ATOM 3 OP1 G B 31 12.558 19.624 -5.136 1.00 29.61 O
ATOM 4 OP2 G B 31 12.228 20.529 -2.754 1.00 29.08 O
ATOM 5 O5' G B 31 13.577 18.479 -3.174 1.00 28.71 O
ATOM 6 C5' G B 31 14.286 17.548 -3.981 1.00 27.62 C
ATOM 7 C4' G B 31 14.614 16.309 -3.184 1.00 26.56 C
ATOM 8 O4' G B 31 15.528 16.659 -2.111 1.00 26.47 O
ATOM 9 C3' G B 31 13.440 15.654 -2.475 1.00 26.55 C
ATOM 10 O3' G B 31 12.764 14.764 -3.357 1.00 27.05 O
ATOM 11 C2' G B 31 14.145 14.886 -1.362 1.00 25.66 C
ATOM 12 O2' G B 31 14.750 13.692 -1.819 1.00 25.16 O
ATOM 13 C1' G B 31 15.239 15.876 -0.962 1.00 24.88 C
ATOM 14 N9 G B 31 14.858 16.781 0.118 1.00 24.02 N
ATOM 15 C8 G B 31 14.192 17.975 -0.004 1.00 23.28 C
ATOM 16 N7 G B 31 14.013 18.581 1.138 1.00 22.97 N
ATOM 17 C5 G B 31 14.588 17.731 2.074 1.00 23.35 C
ATOM 18 C6 G B 31 14.704 17.859 3.489 1.00 23.49 C
ATOM 19 O6 G B 31 14.306 18.781 4.220 1.00 23.56 O
ATOM 20 N1 G B 31 15.365 16.769 4.047 1.00 22.65 N
ATOM 21 C2 G B 31 15.854 15.696 3.342 1.00 22.56 C
ATOM 22 N2 G B 31 16.472 14.748 4.062 1.00 21.05 N
ATOM 23 N3 G B 31 15.748 15.564 2.026 1.00 23.00 N
ATOM 24 C4 G B 31 15.109 16.612 1.462 1.00 23.27 C
ATOM 25 P U B 32 11.190 14.959 -3.647 1.00 27.66 P
ATOM 26 OP1 U B 32 10.917 14.174 -4.877 1.00 28.59 O
ATOM 27 OP2 U B 32 10.854 16.400 -3.610 1.00 27.64 O
ATOM 28 O5' U B 32 10.468 14.245 -2.417 1.00 28.13 O
TER
Atoms:
OP1: (13.781,4.406,1.900)
OP2: (14.241,4.119,4.415)
C3': (19.103,6.905,3.544)
C1': (18.820,7.392,1.228)
C5': (16.982,5.469,3.675)
O4': (17.782,6.537,1.668)
C8: (17.943,9.088,-0.443)
O2': (21.009,6.756,2.023)
C6: (16.951,11.889,1.429)
C5: (17.387,10.701,0.824)
C4: (17.866,9.708,1.659)
P: (14.490,4.836,3.140)
C4': (18.202,5.875,2.882)
C2': (19.854,7.501,2.355)
C2: (17.509,10.927,3.456)
N1: (17.025,11.974,2.774)
N3: (17.954,9.758,3.000)
N6: (16.475,12.933,0.748)
N7: (17.438,10.294,-0.503)
N9: (18.231,8.671,0.834)
O5': (16.051,4.794,2.833)
O3': (20.011,6.264,4.429)
OP2: (14.241,4.119,4.415)
C3': (19.103,6.905,3.544)
C1': (18.820,7.392,1.228)
C5': (16.982,5.469,3.675)
O4': (17.782,6.537,1.668)
C8: (17.943,9.088,-0.443)
O2': (21.009,6.756,2.023)
C6: (16.951,11.889,1.429)
C5: (17.387,10.701,0.824)
C4: (17.866,9.708,1.659)
P: (14.490,4.836,3.140)
C4': (18.202,5.875,2.882)
C2': (19.854,7.501,2.355)
C2: (17.509,10.927,3.456)
N1: (17.025,11.974,2.774)
N3: (17.954,9.758,3.000)
N6: (16.475,12.933,0.748)
N7: (17.438,10.294,-0.503)
N9: (18.231,8.671,0.834)
O5': (16.051,4.794,2.833)
O3': (20.011,6.264,4.429)
OP1: (12.558,19.624,-5.136)
OP2: (12.228,20.529,-2.754)
C3': (13.440,15.654,-2.475)
C1': (15.239,15.876,-0.962)
C5': (14.286,17.548,-3.981)
O6: (14.306,18.781,4.220)
O4': (15.528,16.659,-2.111)
C8: (14.192,17.975,-0.004)
C2: (15.854,15.696,3.342)
C6: (14.704,17.859,3.489)
C5: (14.588,17.731,2.074)
C4: (15.109,16.612,1.462)
P: (13.087,19.871,-3.770)
C4': (14.614,16.309,-3.184)
C2': (14.145,14.886,-1.362)
O2': (14.750,13.692,-1.819)
N1: (15.365,16.769,4.047)
N2: (16.472,14.748,4.062)
N3: (15.748,15.564,2.026)
N7: (14.013,18.581,1.138)
N9: (14.858,16.781,0.118)
O5': (13.577,18.479,-3.174)
O3': (12.764,14.764,-3.357)
OP2: (12.228,20.529,-2.754)
C3': (13.440,15.654,-2.475)
C1': (15.239,15.876,-0.962)
C5': (14.286,17.548,-3.981)
O6: (14.306,18.781,4.220)
O4': (15.528,16.659,-2.111)
C8: (14.192,17.975,-0.004)
C2: (15.854,15.696,3.342)
C6: (14.704,17.859,3.489)
C5: (14.588,17.731,2.074)
C4: (15.109,16.612,1.462)
P: (13.087,19.871,-3.770)
C4': (14.614,16.309,-3.184)
C2': (14.145,14.886,-1.362)
O2': (14.750,13.692,-1.819)
N1: (15.365,16.769,4.047)
N2: (16.472,14.748,4.062)
N3: (15.748,15.564,2.026)
N7: (14.013,18.581,1.138)
N9: (14.858,16.781,0.118)
O5': (13.577,18.479,-3.174)
O3': (12.764,14.764,-3.357)
Image (generated by PyMOL):