Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1AQ4:S3:S4
Extra
PDB:
ATOM 1 O3' G A 2 2.066 103.340 -7.753 0.60 45.02 O
ATOM 2 P A A 3 2.231 104.950 -7.557 0.60 42.07 P
ATOM 3 OP1 A A 3 3.551 105.347 -8.183 0.60 42.96 O
ATOM 4 OP2 A A 3 1.976 105.304 -6.120 0.60 42.68 O
ATOM 5 O5' A A 3 1.047 105.568 -8.436 0.60 41.02 O
ATOM 6 C5' A A 3 -0.339 105.371 -8.063 0.60 42.62 C
ATOM 7 C4' A A 3 -1.231 105.647 -9.259 0.60 41.65 C
ATOM 8 O4' A A 3 -0.964 106.998 -9.714 0.60 42.90 O
ATOM 9 C3' A A 3 -0.944 104.744 -10.452 0.60 41.52 C
ATOM 10 O3' A A 3 -1.893 103.687 -10.476 0.60 43.34 O
ATOM 11 C2' A A 3 -1.122 105.661 -11.656 0.60 41.06 C
ATOM 12 O2' A A 3 -2.476 105.822 -12.055 0.60 41.22 O
ATOM 13 C1' A A 3 -0.624 106.989 -11.091 0.60 40.71 C
ATOM 14 N9 A A 3 0.825 107.182 -11.168 0.60 37.27 N
ATOM 15 C8 A A 3 1.812 106.276 -11.475 0.60 35.70 C
ATOM 16 N7 A A 3 3.030 106.769 -11.386 0.60 34.32 N
ATOM 17 C5 A A 3 2.829 108.094 -11.005 0.60 33.11 C
ATOM 18 C6 A A 3 3.724 109.155 -10.704 0.60 32.07 C
ATOM 19 N6 A A 3 5.061 109.046 -10.722 0.60 32.27 N
ATOM 20 N1 A A 3 3.183 110.350 -10.361 0.60 33.60 N
ATOM 21 C2 A A 3 1.843 110.466 -10.299 0.60 34.45 C
ATOM 22 N3 A A 3 0.902 109.543 -10.536 0.60 35.15 N
ATOM 23 C4 A A 3 1.471 108.368 -10.887 0.60 35.17 C
ATOM 24 P G A 4 -1.431 102.185 -10.097 0.60 44.44 P
ATOM 25 OP1 G A 4 -0.083 101.908 -10.703 0.60 45.75 O
ATOM 26 OP2 G A 4 -2.605 101.317 -10.467 0.60 45.04 O
ATOM 27 O5' G A 4 -1.274 102.214 -8.506 0.60 43.67 O
TER
ATOM 1 O3' A B 3 -1.893 103.687 -10.476 0.60 43.34 O
ATOM 2 P G B 4 -1.431 102.185 -10.097 0.60 44.44 P
ATOM 3 OP1 G B 4 -0.083 101.908 -10.703 0.60 45.75 O
ATOM 4 OP2 G B 4 -2.605 101.317 -10.467 0.60 45.04 O
ATOM 5 O5' G B 4 -1.274 102.214 -8.506 0.60 43.67 O
ATOM 6 C5' G B 4 -2.384 102.590 -7.671 0.60 42.76 C
ATOM 7 C4' G B 4 -3.260 101.385 -7.401 0.60 42.23 C
ATOM 8 O4' G B 4 -2.547 100.425 -6.567 0.60 42.47 O
ATOM 9 C3' G B 4 -4.539 101.687 -6.639 0.60 42.46 C
ATOM 10 O3' G B 4 -5.565 102.098 -7.543 0.60 40.92 O
ATOM 11 C2' G B 4 -4.857 100.361 -5.947 0.60 42.45 C
ATOM 12 O2' G B 4 -5.588 99.487 -6.791 0.60 45.55 O
ATOM 13 C1' G B 4 -3.447 99.816 -5.645 0.60 41.40 C
ATOM 14 N9 G B 4 -2.997 100.157 -4.297 0.60 38.24 N
ATOM 15 C8 G B 4 -1.925 100.959 -3.952 0.60 37.58 C
ATOM 16 N7 G B 4 -1.819 101.150 -2.663 0.60 36.56 N
ATOM 17 C5 G B 4 -2.869 100.422 -2.129 0.60 34.74 C
ATOM 18 C6 G B 4 -3.278 100.271 -0.782 0.60 35.26 C
ATOM 19 O6 G B 4 -2.787 100.783 0.240 0.60 33.24 O
ATOM 20 N1 G B 4 -4.392 99.437 -0.683 0.60 33.76 N
ATOM 21 C2 G B 4 -5.030 98.845 -1.746 0.60 35.80 C
ATOM 22 N2 G B 4 -6.102 98.096 -1.441 0.60 36.00 N
ATOM 23 N3 G B 4 -4.657 98.979 -3.006 0.60 34.76 N
ATOM 24 C4 G B 4 -3.586 99.778 -3.118 0.60 35.26 C
ATOM 25 P G B 5 -6.571 103.270 -7.113 0.60 38.69 P
ATOM 26 OP1 G B 5 -7.243 103.821 -8.337 0.60 38.90 O
ATOM 27 OP2 G B 5 -5.779 104.190 -6.232 0.60 38.80 O
ATOM 28 O5' G B 5 -7.620 102.560 -6.144 0.60 35.75 O
TER
ATOM 2 P A A 3 2.231 104.950 -7.557 0.60 42.07 P
ATOM 3 OP1 A A 3 3.551 105.347 -8.183 0.60 42.96 O
ATOM 4 OP2 A A 3 1.976 105.304 -6.120 0.60 42.68 O
ATOM 5 O5' A A 3 1.047 105.568 -8.436 0.60 41.02 O
ATOM 6 C5' A A 3 -0.339 105.371 -8.063 0.60 42.62 C
ATOM 7 C4' A A 3 -1.231 105.647 -9.259 0.60 41.65 C
ATOM 8 O4' A A 3 -0.964 106.998 -9.714 0.60 42.90 O
ATOM 9 C3' A A 3 -0.944 104.744 -10.452 0.60 41.52 C
ATOM 10 O3' A A 3 -1.893 103.687 -10.476 0.60 43.34 O
ATOM 11 C2' A A 3 -1.122 105.661 -11.656 0.60 41.06 C
ATOM 12 O2' A A 3 -2.476 105.822 -12.055 0.60 41.22 O
ATOM 13 C1' A A 3 -0.624 106.989 -11.091 0.60 40.71 C
ATOM 14 N9 A A 3 0.825 107.182 -11.168 0.60 37.27 N
ATOM 15 C8 A A 3 1.812 106.276 -11.475 0.60 35.70 C
ATOM 16 N7 A A 3 3.030 106.769 -11.386 0.60 34.32 N
ATOM 17 C5 A A 3 2.829 108.094 -11.005 0.60 33.11 C
ATOM 18 C6 A A 3 3.724 109.155 -10.704 0.60 32.07 C
ATOM 19 N6 A A 3 5.061 109.046 -10.722 0.60 32.27 N
ATOM 20 N1 A A 3 3.183 110.350 -10.361 0.60 33.60 N
ATOM 21 C2 A A 3 1.843 110.466 -10.299 0.60 34.45 C
ATOM 22 N3 A A 3 0.902 109.543 -10.536 0.60 35.15 N
ATOM 23 C4 A A 3 1.471 108.368 -10.887 0.60 35.17 C
ATOM 24 P G A 4 -1.431 102.185 -10.097 0.60 44.44 P
ATOM 25 OP1 G A 4 -0.083 101.908 -10.703 0.60 45.75 O
ATOM 26 OP2 G A 4 -2.605 101.317 -10.467 0.60 45.04 O
ATOM 27 O5' G A 4 -1.274 102.214 -8.506 0.60 43.67 O
TER
ATOM 1 O3' A B 3 -1.893 103.687 -10.476 0.60 43.34 O
ATOM 2 P G B 4 -1.431 102.185 -10.097 0.60 44.44 P
ATOM 3 OP1 G B 4 -0.083 101.908 -10.703 0.60 45.75 O
ATOM 4 OP2 G B 4 -2.605 101.317 -10.467 0.60 45.04 O
ATOM 5 O5' G B 4 -1.274 102.214 -8.506 0.60 43.67 O
ATOM 6 C5' G B 4 -2.384 102.590 -7.671 0.60 42.76 C
ATOM 7 C4' G B 4 -3.260 101.385 -7.401 0.60 42.23 C
ATOM 8 O4' G B 4 -2.547 100.425 -6.567 0.60 42.47 O
ATOM 9 C3' G B 4 -4.539 101.687 -6.639 0.60 42.46 C
ATOM 10 O3' G B 4 -5.565 102.098 -7.543 0.60 40.92 O
ATOM 11 C2' G B 4 -4.857 100.361 -5.947 0.60 42.45 C
ATOM 12 O2' G B 4 -5.588 99.487 -6.791 0.60 45.55 O
ATOM 13 C1' G B 4 -3.447 99.816 -5.645 0.60 41.40 C
ATOM 14 N9 G B 4 -2.997 100.157 -4.297 0.60 38.24 N
ATOM 15 C8 G B 4 -1.925 100.959 -3.952 0.60 37.58 C
ATOM 16 N7 G B 4 -1.819 101.150 -2.663 0.60 36.56 N
ATOM 17 C5 G B 4 -2.869 100.422 -2.129 0.60 34.74 C
ATOM 18 C6 G B 4 -3.278 100.271 -0.782 0.60 35.26 C
ATOM 19 O6 G B 4 -2.787 100.783 0.240 0.60 33.24 O
ATOM 20 N1 G B 4 -4.392 99.437 -0.683 0.60 33.76 N
ATOM 21 C2 G B 4 -5.030 98.845 -1.746 0.60 35.80 C
ATOM 22 N2 G B 4 -6.102 98.096 -1.441 0.60 36.00 N
ATOM 23 N3 G B 4 -4.657 98.979 -3.006 0.60 34.76 N
ATOM 24 C4 G B 4 -3.586 99.778 -3.118 0.60 35.26 C
ATOM 25 P G B 5 -6.571 103.270 -7.113 0.60 38.69 P
ATOM 26 OP1 G B 5 -7.243 103.821 -8.337 0.60 38.90 O
ATOM 27 OP2 G B 5 -5.779 104.190 -6.232 0.60 38.80 O
ATOM 28 O5' G B 5 -7.620 102.560 -6.144 0.60 35.75 O
TER
Atoms:
OP1: (3.551,105.347,-8.183)
OP2: (1.976,105.304,-6.120)
C3': (-0.944,104.744,-10.452)
C1': (-0.624,106.989,-11.091)
C5': (-0.339,105.371,-8.063)
O4': (-0.964,106.998,-9.714)
C8: (1.812,106.276,-11.475)
O2': (-2.476,105.822,-12.055)
C6: (3.724,109.155,-10.704)
C5: (2.829,108.094,-11.005)
C4: (1.471,108.368,-10.887)
P: (2.231,104.950,-7.557)
C4': (-1.231,105.647,-9.259)
C2': (-1.122,105.661,-11.656)
C2: (1.843,110.466,-10.299)
N1: (3.183,110.350,-10.361)
N3: (0.902,109.543,-10.536)
N6: (5.061,109.046,-10.722)
N7: (3.030,106.769,-11.386)
N9: (0.825,107.182,-11.168)
O5': (1.047,105.568,-8.436)
O3': (-1.893,103.687,-10.476)
OP2: (1.976,105.304,-6.120)
C3': (-0.944,104.744,-10.452)
C1': (-0.624,106.989,-11.091)
C5': (-0.339,105.371,-8.063)
O4': (-0.964,106.998,-9.714)
C8: (1.812,106.276,-11.475)
O2': (-2.476,105.822,-12.055)
C6: (3.724,109.155,-10.704)
C5: (2.829,108.094,-11.005)
C4: (1.471,108.368,-10.887)
P: (2.231,104.950,-7.557)
C4': (-1.231,105.647,-9.259)
C2': (-1.122,105.661,-11.656)
C2: (1.843,110.466,-10.299)
N1: (3.183,110.350,-10.361)
N3: (0.902,109.543,-10.536)
N6: (5.061,109.046,-10.722)
N7: (3.030,106.769,-11.386)
N9: (0.825,107.182,-11.168)
O5': (1.047,105.568,-8.436)
O3': (-1.893,103.687,-10.476)
OP1: (-0.083,101.908,-10.703)
OP2: (-2.605,101.317,-10.467)
C3': (-4.539,101.687,-6.639)
C1': (-3.447,99.816,-5.645)
C5': (-2.384,102.590,-7.671)
O6: (-2.787,100.783,0.240)
O4': (-2.547,100.425,-6.567)
C8: (-1.925,100.959,-3.952)
C2: (-5.030,98.845,-1.746)
C6: (-3.278,100.271,-0.782)
C5: (-2.869,100.422,-2.129)
C4: (-3.586,99.778,-3.118)
P: (-1.431,102.185,-10.097)
C4': (-3.260,101.385,-7.401)
C2': (-4.857,100.361,-5.947)
O2': (-5.588,99.487,-6.791)
N1: (-4.392,99.437,-0.683)
N2: (-6.102,98.096,-1.441)
N3: (-4.657,98.979,-3.006)
N7: (-1.819,101.150,-2.663)
N9: (-2.997,100.157,-4.297)
O5': (-1.274,102.214,-8.506)
O3': (-5.565,102.098,-7.543)
OP2: (-2.605,101.317,-10.467)
C3': (-4.539,101.687,-6.639)
C1': (-3.447,99.816,-5.645)
C5': (-2.384,102.590,-7.671)
O6: (-2.787,100.783,0.240)
O4': (-2.547,100.425,-6.567)
C8: (-1.925,100.959,-3.952)
C2: (-5.030,98.845,-1.746)
C6: (-3.278,100.271,-0.782)
C5: (-2.869,100.422,-2.129)
C4: (-3.586,99.778,-3.118)
P: (-1.431,102.185,-10.097)
C4': (-3.260,101.385,-7.401)
C2': (-4.857,100.361,-5.947)
O2': (-5.588,99.487,-6.791)
N1: (-4.392,99.437,-0.683)
N2: (-6.102,98.096,-1.441)
N3: (-4.657,98.979,-3.006)
N7: (-1.819,101.150,-2.663)
N9: (-2.997,100.157,-4.297)
O5': (-1.274,102.214,-8.506)
O3': (-5.565,102.098,-7.543)
Image (generated by PyMOL):