Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDK:R5:R6
Extra
PDB:
ATOM 1 O3' G A 4 23.381 97.867 39.603 0.50114.05 O
ATOM 2 P A A 5 23.455 99.428 40.059 0.50111.71 P
ATOM 3 OP1 A A 5 23.322 99.498 41.556 0.50111.00 O
ATOM 4 OP2 A A 5 22.475 100.205 39.202 0.50110.99 O
ATOM 5 O5' A A 5 24.951 99.889 39.722 0.50109.57 O
ATOM 6 C5' A A 5 25.432 99.984 38.352 0.50107.03 C
ATOM 7 C4' A A 5 26.941 99.893 38.340 0.50105.41 C
ATOM 8 O4' A A 5 27.460 100.980 39.157 0.50103.23 O
ATOM 9 C3' A A 5 27.462 98.605 38.972 0.50105.70 C
ATOM 10 O3' A A 5 27.663 97.607 37.959 0.50108.30 O
ATOM 11 C2' A A 5 28.759 99.054 39.660 0.50103.03 C
ATOM 12 O2' A A 5 29.875 99.114 38.784 0.50102.63 O
ATOM 13 C1' A A 5 28.414 100.481 40.088 0.50100.28 C
ATOM 14 N9 A A 5 27.805 100.640 41.417 0.50 95.39 N
ATOM 15 C8 A A 5 27.406 99.671 42.321 0.50 94.25 C
ATOM 16 N7 A A 5 26.792 100.160 43.380 0.50 92.26 N
ATOM 17 C5 A A 5 26.808 101.535 43.168 0.50 91.55 C
ATOM 18 C6 A A 5 26.287 102.624 43.912 0.50 90.75 C
ATOM 19 N6 A A 5 25.579 102.476 45.050 0.50 89.19 N
ATOM 20 N1 A A 5 26.502 103.884 43.426 0.50 88.63 N
ATOM 21 C2 A A 5 27.164 104.017 42.268 0.50 85.82 C
ATOM 22 N3 A A 5 27.675 103.076 41.471 0.50 87.70 N
ATOM 23 C4 A A 5 27.456 101.846 41.985 0.50 91.60 C
ATOM 24 P G A 6 26.813 96.220 37.996 0.50111.19 P
ATOM 25 OP1 G A 6 26.594 95.756 39.417 0.50110.65 O
ATOM 26 OP2 G A 6 27.525 95.320 37.017 0.50111.74 O
ATOM 27 O5' G A 6 25.381 96.574 37.365 0.50110.21 O
TER
ATOM 1 O3' A B 5 27.663 97.607 37.959 0.50108.30 O
ATOM 2 P G B 6 26.813 96.220 37.996 0.50111.19 P
ATOM 3 OP1 G B 6 26.594 95.756 39.417 0.50110.65 O
ATOM 4 OP2 G B 6 27.525 95.320 37.017 0.50111.74 O
ATOM 5 O5' G B 6 25.381 96.574 37.365 0.50110.21 O
ATOM 6 C5' G B 6 25.271 97.165 36.055 0.50108.43 C
ATOM 7 C4' G B 6 25.378 96.100 34.983 0.50106.94 C
ATOM 8 O4' G B 6 24.172 95.279 34.950 0.50107.75 O
ATOM 9 C3' G B 6 25.463 96.681 33.580 0.50105.96 C
ATOM 10 O3' G B 6 26.775 97.103 33.255 0.50102.29 O
ATOM 11 C2' G B 6 24.934 95.549 32.702 0.50106.91 C
ATOM 12 O2' G B 6 25.903 94.557 32.378 0.50107.10 O
ATOM 13 C1' G B 6 23.835 94.974 33.587 0.50108.11 C
ATOM 14 N9 G B 6 22.566 95.627 33.264 0.50109.64 N
ATOM 15 C8 G B 6 21.841 96.501 34.044 0.50110.43 C
ATOM 16 N7 G B 6 20.743 96.921 33.474 0.50110.74 N
ATOM 17 C5 G B 6 20.732 96.287 32.231 0.50110.56 C
ATOM 18 C6 G B 6 19.775 96.343 31.171 0.50110.54 C
ATOM 19 O6 G B 6 18.697 96.967 31.131 0.50109.85 O
ATOM 20 N1 G B 6 20.165 95.563 30.081 0.50110.45 N
ATOM 21 C2 G B 6 21.323 94.813 30.023 0.50111.17 C
ATOM 22 N2 G B 6 21.528 94.127 28.866 0.50111.10 N
ATOM 23 N3 G B 6 22.217 94.736 31.012 0.50111.15 N
ATOM 24 C4 G B 6 21.857 95.494 32.079 0.50110.49 C
ATOM 25 P G B 7 26.973 98.421 32.352 0.50 99.18 P
ATOM 26 OP1 G B 7 28.430 98.764 32.443 0.50 99.03 O
ATOM 27 OP2 G B 7 25.948 99.437 32.766 0.50 97.82 O
ATOM 28 O5' G B 7 26.598 97.952 30.878 0.50 96.53 O
TER
ATOM 2 P A A 5 23.455 99.428 40.059 0.50111.71 P
ATOM 3 OP1 A A 5 23.322 99.498 41.556 0.50111.00 O
ATOM 4 OP2 A A 5 22.475 100.205 39.202 0.50110.99 O
ATOM 5 O5' A A 5 24.951 99.889 39.722 0.50109.57 O
ATOM 6 C5' A A 5 25.432 99.984 38.352 0.50107.03 C
ATOM 7 C4' A A 5 26.941 99.893 38.340 0.50105.41 C
ATOM 8 O4' A A 5 27.460 100.980 39.157 0.50103.23 O
ATOM 9 C3' A A 5 27.462 98.605 38.972 0.50105.70 C
ATOM 10 O3' A A 5 27.663 97.607 37.959 0.50108.30 O
ATOM 11 C2' A A 5 28.759 99.054 39.660 0.50103.03 C
ATOM 12 O2' A A 5 29.875 99.114 38.784 0.50102.63 O
ATOM 13 C1' A A 5 28.414 100.481 40.088 0.50100.28 C
ATOM 14 N9 A A 5 27.805 100.640 41.417 0.50 95.39 N
ATOM 15 C8 A A 5 27.406 99.671 42.321 0.50 94.25 C
ATOM 16 N7 A A 5 26.792 100.160 43.380 0.50 92.26 N
ATOM 17 C5 A A 5 26.808 101.535 43.168 0.50 91.55 C
ATOM 18 C6 A A 5 26.287 102.624 43.912 0.50 90.75 C
ATOM 19 N6 A A 5 25.579 102.476 45.050 0.50 89.19 N
ATOM 20 N1 A A 5 26.502 103.884 43.426 0.50 88.63 N
ATOM 21 C2 A A 5 27.164 104.017 42.268 0.50 85.82 C
ATOM 22 N3 A A 5 27.675 103.076 41.471 0.50 87.70 N
ATOM 23 C4 A A 5 27.456 101.846 41.985 0.50 91.60 C
ATOM 24 P G A 6 26.813 96.220 37.996 0.50111.19 P
ATOM 25 OP1 G A 6 26.594 95.756 39.417 0.50110.65 O
ATOM 26 OP2 G A 6 27.525 95.320 37.017 0.50111.74 O
ATOM 27 O5' G A 6 25.381 96.574 37.365 0.50110.21 O
TER
ATOM 1 O3' A B 5 27.663 97.607 37.959 0.50108.30 O
ATOM 2 P G B 6 26.813 96.220 37.996 0.50111.19 P
ATOM 3 OP1 G B 6 26.594 95.756 39.417 0.50110.65 O
ATOM 4 OP2 G B 6 27.525 95.320 37.017 0.50111.74 O
ATOM 5 O5' G B 6 25.381 96.574 37.365 0.50110.21 O
ATOM 6 C5' G B 6 25.271 97.165 36.055 0.50108.43 C
ATOM 7 C4' G B 6 25.378 96.100 34.983 0.50106.94 C
ATOM 8 O4' G B 6 24.172 95.279 34.950 0.50107.75 O
ATOM 9 C3' G B 6 25.463 96.681 33.580 0.50105.96 C
ATOM 10 O3' G B 6 26.775 97.103 33.255 0.50102.29 O
ATOM 11 C2' G B 6 24.934 95.549 32.702 0.50106.91 C
ATOM 12 O2' G B 6 25.903 94.557 32.378 0.50107.10 O
ATOM 13 C1' G B 6 23.835 94.974 33.587 0.50108.11 C
ATOM 14 N9 G B 6 22.566 95.627 33.264 0.50109.64 N
ATOM 15 C8 G B 6 21.841 96.501 34.044 0.50110.43 C
ATOM 16 N7 G B 6 20.743 96.921 33.474 0.50110.74 N
ATOM 17 C5 G B 6 20.732 96.287 32.231 0.50110.56 C
ATOM 18 C6 G B 6 19.775 96.343 31.171 0.50110.54 C
ATOM 19 O6 G B 6 18.697 96.967 31.131 0.50109.85 O
ATOM 20 N1 G B 6 20.165 95.563 30.081 0.50110.45 N
ATOM 21 C2 G B 6 21.323 94.813 30.023 0.50111.17 C
ATOM 22 N2 G B 6 21.528 94.127 28.866 0.50111.10 N
ATOM 23 N3 G B 6 22.217 94.736 31.012 0.50111.15 N
ATOM 24 C4 G B 6 21.857 95.494 32.079 0.50110.49 C
ATOM 25 P G B 7 26.973 98.421 32.352 0.50 99.18 P
ATOM 26 OP1 G B 7 28.430 98.764 32.443 0.50 99.03 O
ATOM 27 OP2 G B 7 25.948 99.437 32.766 0.50 97.82 O
ATOM 28 O5' G B 7 26.598 97.952 30.878 0.50 96.53 O
TER
Atoms:
OP1: (23.322,99.498,41.556)
OP2: (22.475,100.205,39.202)
C3': (27.462,98.605,38.972)
C1': (28.414,100.481,40.088)
C5': (25.432,99.984,38.352)
O4': (27.460,100.980,39.157)
C8: (27.406,99.671,42.321)
O2': (29.875,99.114,38.784)
C6: (26.287,102.624,43.912)
C5: (26.808,101.535,43.168)
C4: (27.456,101.846,41.985)
P: (23.455,99.428,40.059)
C4': (26.941,99.893,38.340)
C2': (28.759,99.054,39.660)
C2: (27.164,104.017,42.268)
N1: (26.502,103.884,43.426)
N3: (27.675,103.076,41.471)
N6: (25.579,102.476,45.050)
N7: (26.792,100.160,43.380)
N9: (27.805,100.640,41.417)
O5': (24.951,99.889,39.722)
O3': (27.663,97.607,37.959)
OP2: (22.475,100.205,39.202)
C3': (27.462,98.605,38.972)
C1': (28.414,100.481,40.088)
C5': (25.432,99.984,38.352)
O4': (27.460,100.980,39.157)
C8: (27.406,99.671,42.321)
O2': (29.875,99.114,38.784)
C6: (26.287,102.624,43.912)
C5: (26.808,101.535,43.168)
C4: (27.456,101.846,41.985)
P: (23.455,99.428,40.059)
C4': (26.941,99.893,38.340)
C2': (28.759,99.054,39.660)
C2: (27.164,104.017,42.268)
N1: (26.502,103.884,43.426)
N3: (27.675,103.076,41.471)
N6: (25.579,102.476,45.050)
N7: (26.792,100.160,43.380)
N9: (27.805,100.640,41.417)
O5': (24.951,99.889,39.722)
O3': (27.663,97.607,37.959)
OP1: (26.594,95.756,39.417)
OP2: (27.525,95.320,37.017)
C3': (25.463,96.681,33.580)
C1': (23.835,94.974,33.587)
C5': (25.271,97.165,36.055)
O6: (18.697,96.967,31.131)
O4': (24.172,95.279,34.950)
C8: (21.841,96.501,34.044)
C2: (21.323,94.813,30.023)
C6: (19.775,96.343,31.171)
C5: (20.732,96.287,32.231)
C4: (21.857,95.494,32.079)
P: (26.813,96.220,37.996)
C4': (25.378,96.100,34.983)
C2': (24.934,95.549,32.702)
O2': (25.903,94.557,32.378)
N1: (20.165,95.563,30.081)
N2: (21.528,94.127,28.866)
N3: (22.217,94.736,31.012)
N7: (20.743,96.921,33.474)
N9: (22.566,95.627,33.264)
O5': (25.381,96.574,37.365)
O3': (26.775,97.103,33.255)
OP2: (27.525,95.320,37.017)
C3': (25.463,96.681,33.580)
C1': (23.835,94.974,33.587)
C5': (25.271,97.165,36.055)
O6: (18.697,96.967,31.131)
O4': (24.172,95.279,34.950)
C8: (21.841,96.501,34.044)
C2: (21.323,94.813,30.023)
C6: (19.775,96.343,31.171)
C5: (20.732,96.287,32.231)
C4: (21.857,95.494,32.079)
P: (26.813,96.220,37.996)
C4': (25.378,96.100,34.983)
C2': (24.934,95.549,32.702)
O2': (25.903,94.557,32.378)
N1: (20.165,95.563,30.081)
N2: (21.528,94.127,28.866)
N3: (22.217,94.736,31.012)
N7: (20.743,96.921,33.474)
N9: (22.566,95.627,33.264)
O5': (25.381,96.574,37.365)
O3': (26.775,97.103,33.255)
Image (generated by PyMOL):