Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BNY:R3:R4
Extra
PDB:
ATOM 1 O3' G A 2 -103.082 -32.765 2.213 0.70 66.49 O
ATOM 2 P A A 3 -104.459 -33.541 1.930 0.70 63.68 P
ATOM 3 OP1 A A 3 -104.971 -34.022 3.239 0.70 63.46 O
ATOM 4 OP2 A A 3 -104.222 -34.513 0.829 0.70 62.01 O
ATOM 5 O5' A A 3 -105.448 -32.404 1.414 0.70 63.26 O
ATOM 6 C5' A A 3 -105.272 -31.772 0.144 0.70 62.08 C
ATOM 7 C4' A A 3 -105.935 -30.417 0.166 0.70 61.61 C
ATOM 8 O4' A A 3 -107.336 -30.603 0.500 0.70 61.09 O
ATOM 9 C3' A A 3 -105.364 -29.495 1.235 0.70 61.65 C
ATOM 10 O3' A A 3 -104.378 -28.645 0.642 0.70 62.79 O
ATOM 11 C2' A A 3 -106.590 -28.720 1.715 0.70 60.42 C
ATOM 12 O2' A A 3 -106.912 -27.623 0.886 0.70 60.11 O
ATOM 13 C1' A A 3 -107.689 -29.777 1.592 0.70 59.57 C
ATOM 14 N9 A A 3 -107.854 -30.658 2.750 0.70 57.91 N
ATOM 15 C8 A A 3 -107.050 -30.802 3.856 0.70 57.79 C
ATOM 16 N7 A A 3 -107.453 -31.738 4.684 0.70 56.85 N
ATOM 17 C5 A A 3 -108.607 -32.234 4.091 0.70 56.25 C
ATOM 18 C6 A A 3 -109.500 -33.259 4.461 0.70 55.12 C
ATOM 19 N6 A A 3 -109.360 -34.002 5.561 0.70 53.40 N
ATOM 20 N1 A A 3 -110.554 -33.499 3.647 0.70 54.27 N
ATOM 21 C2 A A 3 -110.691 -32.759 2.538 0.70 53.54 C
ATOM 22 N3 A A 3 -109.917 -31.777 2.081 0.70 54.39 N
ATOM 23 C4 A A 3 -108.878 -31.563 2.911 0.70 56.46 C
ATOM 24 P G A 4 -102.832 -28.766 1.082 0.70 63.05 P
ATOM 25 OP1 G A 4 -102.779 -29.221 2.498 0.70 63.97 O
ATOM 26 OP2 G A 4 -102.175 -27.491 0.695 0.70 62.85 O
ATOM 27 O5' G A 4 -102.232 -29.924 0.165 0.70 61.30 O
TER
ATOM 1 O3' A B 3 -104.378 -28.645 0.642 0.70 62.79 O
ATOM 2 P G B 4 -102.832 -28.766 1.082 0.70 63.05 P
ATOM 3 OP1 G B 4 -102.779 -29.221 2.498 0.70 63.97 O
ATOM 4 OP2 G B 4 -102.175 -27.491 0.695 0.70 62.85 O
ATOM 5 O5' G B 4 -102.232 -29.924 0.165 0.70 61.30 O
ATOM 6 C5' G B 4 -102.372 -29.883 -1.251 0.70 59.56 C
ATOM 7 C4' G B 4 -101.123 -29.314 -1.883 0.70 58.93 C
ATOM 8 O4' G B 4 -99.981 -30.174 -1.610 0.70 58.78 O
ATOM 9 C3' G B 4 -101.154 -29.239 -3.398 0.70 58.55 C
ATOM 10 O3' G B 4 -101.866 -28.094 -3.835 0.70 57.80 O
ATOM 11 C2' G B 4 -99.672 -29.175 -3.740 0.70 58.57 C
ATOM 12 O2' G B 4 -99.111 -27.895 -3.532 0.70 58.36 O
ATOM 13 C1' G B 4 -99.101 -30.169 -2.729 0.70 58.62 C
ATOM 14 N9 G B 4 -99.053 -31.521 -3.275 0.70 59.02 N
ATOM 15 C8 G B 4 -99.747 -32.619 -2.826 0.70 59.47 C
ATOM 16 N7 G B 4 -99.510 -33.698 -3.524 0.70 59.78 N
ATOM 17 C5 G B 4 -98.601 -33.289 -4.492 0.70 59.93 C
ATOM 18 C6 G B 4 -97.975 -34.025 -5.536 0.70 60.12 C
ATOM 19 O6 G B 4 -98.103 -35.227 -5.818 0.70 60.05 O
ATOM 20 N1 G B 4 -97.123 -33.220 -6.290 0.70 59.65 N
ATOM 21 C2 G B 4 -96.900 -31.880 -6.070 0.70 59.95 C
ATOM 22 N2 G B 4 -96.044 -31.276 -6.915 0.70 59.50 N
ATOM 23 N3 G B 4 -97.475 -31.184 -5.097 0.70 59.81 N
ATOM 24 C4 G B 4 -98.307 -31.947 -4.353 0.70 59.53 C
ATOM 25 P G B 5 -102.933 -28.238 -5.024 0.70 57.04 P
ATOM 26 OP1 G B 5 -103.835 -27.057 -4.973 0.70 56.16 O
ATOM 27 OP2 G B 5 -103.504 -29.608 -4.934 0.70 56.32 O
ATOM 28 O5' G B 5 -102.045 -28.155 -6.344 0.70 56.96 O
TER
ATOM 2 P A A 3 -104.459 -33.541 1.930 0.70 63.68 P
ATOM 3 OP1 A A 3 -104.971 -34.022 3.239 0.70 63.46 O
ATOM 4 OP2 A A 3 -104.222 -34.513 0.829 0.70 62.01 O
ATOM 5 O5' A A 3 -105.448 -32.404 1.414 0.70 63.26 O
ATOM 6 C5' A A 3 -105.272 -31.772 0.144 0.70 62.08 C
ATOM 7 C4' A A 3 -105.935 -30.417 0.166 0.70 61.61 C
ATOM 8 O4' A A 3 -107.336 -30.603 0.500 0.70 61.09 O
ATOM 9 C3' A A 3 -105.364 -29.495 1.235 0.70 61.65 C
ATOM 10 O3' A A 3 -104.378 -28.645 0.642 0.70 62.79 O
ATOM 11 C2' A A 3 -106.590 -28.720 1.715 0.70 60.42 C
ATOM 12 O2' A A 3 -106.912 -27.623 0.886 0.70 60.11 O
ATOM 13 C1' A A 3 -107.689 -29.777 1.592 0.70 59.57 C
ATOM 14 N9 A A 3 -107.854 -30.658 2.750 0.70 57.91 N
ATOM 15 C8 A A 3 -107.050 -30.802 3.856 0.70 57.79 C
ATOM 16 N7 A A 3 -107.453 -31.738 4.684 0.70 56.85 N
ATOM 17 C5 A A 3 -108.607 -32.234 4.091 0.70 56.25 C
ATOM 18 C6 A A 3 -109.500 -33.259 4.461 0.70 55.12 C
ATOM 19 N6 A A 3 -109.360 -34.002 5.561 0.70 53.40 N
ATOM 20 N1 A A 3 -110.554 -33.499 3.647 0.70 54.27 N
ATOM 21 C2 A A 3 -110.691 -32.759 2.538 0.70 53.54 C
ATOM 22 N3 A A 3 -109.917 -31.777 2.081 0.70 54.39 N
ATOM 23 C4 A A 3 -108.878 -31.563 2.911 0.70 56.46 C
ATOM 24 P G A 4 -102.832 -28.766 1.082 0.70 63.05 P
ATOM 25 OP1 G A 4 -102.779 -29.221 2.498 0.70 63.97 O
ATOM 26 OP2 G A 4 -102.175 -27.491 0.695 0.70 62.85 O
ATOM 27 O5' G A 4 -102.232 -29.924 0.165 0.70 61.30 O
TER
ATOM 1 O3' A B 3 -104.378 -28.645 0.642 0.70 62.79 O
ATOM 2 P G B 4 -102.832 -28.766 1.082 0.70 63.05 P
ATOM 3 OP1 G B 4 -102.779 -29.221 2.498 0.70 63.97 O
ATOM 4 OP2 G B 4 -102.175 -27.491 0.695 0.70 62.85 O
ATOM 5 O5' G B 4 -102.232 -29.924 0.165 0.70 61.30 O
ATOM 6 C5' G B 4 -102.372 -29.883 -1.251 0.70 59.56 C
ATOM 7 C4' G B 4 -101.123 -29.314 -1.883 0.70 58.93 C
ATOM 8 O4' G B 4 -99.981 -30.174 -1.610 0.70 58.78 O
ATOM 9 C3' G B 4 -101.154 -29.239 -3.398 0.70 58.55 C
ATOM 10 O3' G B 4 -101.866 -28.094 -3.835 0.70 57.80 O
ATOM 11 C2' G B 4 -99.672 -29.175 -3.740 0.70 58.57 C
ATOM 12 O2' G B 4 -99.111 -27.895 -3.532 0.70 58.36 O
ATOM 13 C1' G B 4 -99.101 -30.169 -2.729 0.70 58.62 C
ATOM 14 N9 G B 4 -99.053 -31.521 -3.275 0.70 59.02 N
ATOM 15 C8 G B 4 -99.747 -32.619 -2.826 0.70 59.47 C
ATOM 16 N7 G B 4 -99.510 -33.698 -3.524 0.70 59.78 N
ATOM 17 C5 G B 4 -98.601 -33.289 -4.492 0.70 59.93 C
ATOM 18 C6 G B 4 -97.975 -34.025 -5.536 0.70 60.12 C
ATOM 19 O6 G B 4 -98.103 -35.227 -5.818 0.70 60.05 O
ATOM 20 N1 G B 4 -97.123 -33.220 -6.290 0.70 59.65 N
ATOM 21 C2 G B 4 -96.900 -31.880 -6.070 0.70 59.95 C
ATOM 22 N2 G B 4 -96.044 -31.276 -6.915 0.70 59.50 N
ATOM 23 N3 G B 4 -97.475 -31.184 -5.097 0.70 59.81 N
ATOM 24 C4 G B 4 -98.307 -31.947 -4.353 0.70 59.53 C
ATOM 25 P G B 5 -102.933 -28.238 -5.024 0.70 57.04 P
ATOM 26 OP1 G B 5 -103.835 -27.057 -4.973 0.70 56.16 O
ATOM 27 OP2 G B 5 -103.504 -29.608 -4.934 0.70 56.32 O
ATOM 28 O5' G B 5 -102.045 -28.155 -6.344 0.70 56.96 O
TER
Atoms:
OP1: (-104.971,-34.022,3.239)
OP2: (-104.222,-34.513,0.829)
C3': (-105.364,-29.495,1.235)
C1': (-107.689,-29.777,1.592)
C5': (-105.272,-31.772,0.144)
O4': (-107.336,-30.603,0.500)
C8: (-107.050,-30.802,3.856)
O2': (-106.912,-27.623,0.886)
C6: (-109.500,-33.259,4.461)
C5: (-108.607,-32.234,4.091)
C4: (-108.878,-31.563,2.911)
P: (-104.459,-33.541,1.930)
C4': (-105.935,-30.417,0.166)
C2': (-106.590,-28.720,1.715)
C2: (-110.691,-32.759,2.538)
N1: (-110.554,-33.499,3.647)
N3: (-109.917,-31.777,2.081)
N6: (-109.360,-34.002,5.561)
N7: (-107.453,-31.738,4.684)
N9: (-107.854,-30.658,2.750)
O5': (-105.448,-32.404,1.414)
O3': (-104.378,-28.645,0.642)
OP2: (-104.222,-34.513,0.829)
C3': (-105.364,-29.495,1.235)
C1': (-107.689,-29.777,1.592)
C5': (-105.272,-31.772,0.144)
O4': (-107.336,-30.603,0.500)
C8: (-107.050,-30.802,3.856)
O2': (-106.912,-27.623,0.886)
C6: (-109.500,-33.259,4.461)
C5: (-108.607,-32.234,4.091)
C4: (-108.878,-31.563,2.911)
P: (-104.459,-33.541,1.930)
C4': (-105.935,-30.417,0.166)
C2': (-106.590,-28.720,1.715)
C2: (-110.691,-32.759,2.538)
N1: (-110.554,-33.499,3.647)
N3: (-109.917,-31.777,2.081)
N6: (-109.360,-34.002,5.561)
N7: (-107.453,-31.738,4.684)
N9: (-107.854,-30.658,2.750)
O5': (-105.448,-32.404,1.414)
O3': (-104.378,-28.645,0.642)
OP1: (-102.779,-29.221,2.498)
OP2: (-102.175,-27.491,0.695)
C3': (-101.154,-29.239,-3.398)
C1': (-99.101,-30.169,-2.729)
C5': (-102.372,-29.883,-1.251)
O6: (-98.103,-35.227,-5.818)
O4': (-99.981,-30.174,-1.610)
C8: (-99.747,-32.619,-2.826)
C2: (-96.900,-31.880,-6.070)
C6: (-97.975,-34.025,-5.536)
C5: (-98.601,-33.289,-4.492)
C4: (-98.307,-31.947,-4.353)
P: (-102.832,-28.766,1.082)
C4': (-101.123,-29.314,-1.883)
C2': (-99.672,-29.175,-3.740)
O2': (-99.111,-27.895,-3.532)
N1: (-97.123,-33.220,-6.290)
N2: (-96.044,-31.276,-6.915)
N3: (-97.475,-31.184,-5.097)
N7: (-99.510,-33.698,-3.524)
N9: (-99.053,-31.521,-3.275)
O5': (-102.232,-29.924,0.165)
O3': (-101.866,-28.094,-3.835)
OP2: (-102.175,-27.491,0.695)
C3': (-101.154,-29.239,-3.398)
C1': (-99.101,-30.169,-2.729)
C5': (-102.372,-29.883,-1.251)
O6: (-98.103,-35.227,-5.818)
O4': (-99.981,-30.174,-1.610)
C8: (-99.747,-32.619,-2.826)
C2: (-96.900,-31.880,-6.070)
C6: (-97.975,-34.025,-5.536)
C5: (-98.601,-33.289,-4.492)
C4: (-98.307,-31.947,-4.353)
P: (-102.832,-28.766,1.082)
C4': (-101.123,-29.314,-1.883)
C2': (-99.672,-29.175,-3.740)
O2': (-99.111,-27.895,-3.532)
N1: (-97.123,-33.220,-6.290)
N2: (-96.044,-31.276,-6.915)
N3: (-97.475,-31.184,-5.097)
N7: (-99.510,-33.698,-3.524)
N9: (-99.053,-31.521,-3.275)
O5': (-102.232,-29.924,0.165)
O3': (-101.866,-28.094,-3.835)
Image (generated by PyMOL):