Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BNY:S2:S3
Extra
PDB:
ATOM 1 O3' G A 1 -82.451 -45.232 -44.040 0.50 67.96 O
ATOM 2 P A A 2 -83.779 -46.077 -44.340 0.50 65.06 P
ATOM 3 OP1 A A 2 -84.775 -45.152 -44.932 0.50 63.82 O
ATOM 4 OP2 A A 2 -84.125 -46.838 -43.116 0.50 64.85 O
ATOM 5 O5' A A 2 -83.326 -47.108 -45.465 0.50 64.30 O
ATOM 6 C5' A A 2 -82.528 -48.252 -45.153 0.50 62.47 C
ATOM 7 C4' A A 2 -81.977 -48.845 -46.427 0.50 61.36 C
ATOM 8 O4' A A 2 -83.094 -49.112 -47.316 0.50 60.74 O
ATOM 9 C3' A A 2 -81.056 -47.907 -47.192 0.50 60.66 C
ATOM 10 O3' A A 2 -79.701 -48.184 -46.853 0.50 61.43 O
ATOM 11 C2' A A 2 -81.345 -48.263 -48.645 0.50 59.88 C
ATOM 12 O2' A A 2 -80.660 -49.423 -49.070 0.50 59.50 O
ATOM 13 C1' A A 2 -82.844 -48.552 -48.588 0.50 59.51 C
ATOM 14 N9 A A 2 -83.692 -47.366 -48.705 0.50 58.51 N
ATOM 15 C8 A A 2 -83.328 -46.044 -48.636 0.50 57.97 C
ATOM 16 N7 A A 2 -84.337 -45.213 -48.738 0.50 58.30 N
ATOM 17 C5 A A 2 -85.439 -46.043 -48.893 0.50 57.99 C
ATOM 18 C6 A A 2 -86.812 -45.777 -49.044 0.50 57.93 C
ATOM 19 N6 A A 2 -87.332 -44.547 -49.058 0.50 57.46 N
ATOM 20 N1 A A 2 -87.644 -46.833 -49.178 0.50 58.08 N
ATOM 21 C2 A A 2 -87.124 -48.066 -49.156 0.50 57.49 C
ATOM 22 N3 A A 2 -85.856 -48.443 -49.016 0.50 57.73 N
ATOM 23 C4 A A 2 -85.054 -47.371 -48.887 0.50 58.15 C
ATOM 24 P G A 3 -78.911 -47.214 -45.846 0.50 62.16 P
ATOM 25 OP1 G A 3 -79.295 -45.809 -46.133 0.50 61.41 O
ATOM 26 OP2 G A 3 -77.481 -47.610 -45.902 0.50 61.03 O
ATOM 27 O5' G A 3 -79.472 -47.605 -44.407 0.50 61.61 O
TER
ATOM 1 O3' A B 2 -79.701 -48.184 -46.853 0.50 61.43 O
ATOM 2 P G B 3 -78.911 -47.214 -45.846 0.50 62.16 P
ATOM 3 OP1 G B 3 -79.295 -45.809 -46.133 0.50 61.41 O
ATOM 4 OP2 G B 3 -77.481 -47.610 -45.902 0.50 61.03 O
ATOM 5 O5' G B 3 -79.472 -47.605 -44.407 0.50 61.61 O
ATOM 6 C5' G B 3 -79.362 -48.939 -43.919 0.50 61.37 C
ATOM 7 C4' G B 3 -78.075 -49.100 -43.147 0.50 61.72 C
ATOM 8 O4' G B 3 -78.046 -48.147 -42.051 0.50 62.56 O
ATOM 9 C3' G B 3 -77.870 -50.443 -42.467 0.50 61.22 C
ATOM 10 O3' G B 3 -77.353 -51.409 -43.374 0.50 58.59 O
ATOM 11 C2' G B 3 -76.858 -50.089 -41.386 0.50 61.99 C
ATOM 12 O2' G B 3 -75.543 -49.975 -41.888 0.50 62.83 O
ATOM 13 C1' G B 3 -77.365 -48.715 -40.944 0.50 62.84 C
ATOM 14 N9 G B 3 -78.303 -48.816 -39.830 0.50 63.79 N
ATOM 15 C8 G B 3 -79.622 -48.431 -39.811 0.50 63.86 C
ATOM 16 N7 G B 3 -80.211 -48.677 -38.672 0.50 63.62 N
ATOM 17 C5 G B 3 -79.219 -49.254 -37.891 0.50 64.16 C
ATOM 18 C6 G B 3 -79.264 -49.738 -36.562 0.50 64.56 C
ATOM 19 O6 G B 3 -80.223 -49.756 -35.782 0.50 64.89 O
ATOM 20 N1 G B 3 -78.030 -50.245 -36.160 0.50 65.05 N
ATOM 21 C2 G B 3 -76.897 -50.283 -36.939 0.50 65.39 C
ATOM 22 N2 G B 3 -75.798 -50.817 -36.375 0.50 64.67 N
ATOM 23 N3 G B 3 -76.845 -49.834 -38.181 0.50 65.13 N
ATOM 24 C4 G B 3 -78.033 -49.338 -38.590 0.50 64.30 C
ATOM 25 P G B 4 -77.984 -52.884 -43.403 0.50 56.79 P
ATOM 26 OP1 G B 4 -77.664 -53.499 -44.712 0.50 56.88 O
ATOM 27 OP2 G B 4 -79.398 -52.759 -42.975 0.50 56.02 O
ATOM 28 O5' G B 4 -77.190 -53.675 -42.273 0.50 55.98 O
TER
ATOM 2 P A A 2 -83.779 -46.077 -44.340 0.50 65.06 P
ATOM 3 OP1 A A 2 -84.775 -45.152 -44.932 0.50 63.82 O
ATOM 4 OP2 A A 2 -84.125 -46.838 -43.116 0.50 64.85 O
ATOM 5 O5' A A 2 -83.326 -47.108 -45.465 0.50 64.30 O
ATOM 6 C5' A A 2 -82.528 -48.252 -45.153 0.50 62.47 C
ATOM 7 C4' A A 2 -81.977 -48.845 -46.427 0.50 61.36 C
ATOM 8 O4' A A 2 -83.094 -49.112 -47.316 0.50 60.74 O
ATOM 9 C3' A A 2 -81.056 -47.907 -47.192 0.50 60.66 C
ATOM 10 O3' A A 2 -79.701 -48.184 -46.853 0.50 61.43 O
ATOM 11 C2' A A 2 -81.345 -48.263 -48.645 0.50 59.88 C
ATOM 12 O2' A A 2 -80.660 -49.423 -49.070 0.50 59.50 O
ATOM 13 C1' A A 2 -82.844 -48.552 -48.588 0.50 59.51 C
ATOM 14 N9 A A 2 -83.692 -47.366 -48.705 0.50 58.51 N
ATOM 15 C8 A A 2 -83.328 -46.044 -48.636 0.50 57.97 C
ATOM 16 N7 A A 2 -84.337 -45.213 -48.738 0.50 58.30 N
ATOM 17 C5 A A 2 -85.439 -46.043 -48.893 0.50 57.99 C
ATOM 18 C6 A A 2 -86.812 -45.777 -49.044 0.50 57.93 C
ATOM 19 N6 A A 2 -87.332 -44.547 -49.058 0.50 57.46 N
ATOM 20 N1 A A 2 -87.644 -46.833 -49.178 0.50 58.08 N
ATOM 21 C2 A A 2 -87.124 -48.066 -49.156 0.50 57.49 C
ATOM 22 N3 A A 2 -85.856 -48.443 -49.016 0.50 57.73 N
ATOM 23 C4 A A 2 -85.054 -47.371 -48.887 0.50 58.15 C
ATOM 24 P G A 3 -78.911 -47.214 -45.846 0.50 62.16 P
ATOM 25 OP1 G A 3 -79.295 -45.809 -46.133 0.50 61.41 O
ATOM 26 OP2 G A 3 -77.481 -47.610 -45.902 0.50 61.03 O
ATOM 27 O5' G A 3 -79.472 -47.605 -44.407 0.50 61.61 O
TER
ATOM 1 O3' A B 2 -79.701 -48.184 -46.853 0.50 61.43 O
ATOM 2 P G B 3 -78.911 -47.214 -45.846 0.50 62.16 P
ATOM 3 OP1 G B 3 -79.295 -45.809 -46.133 0.50 61.41 O
ATOM 4 OP2 G B 3 -77.481 -47.610 -45.902 0.50 61.03 O
ATOM 5 O5' G B 3 -79.472 -47.605 -44.407 0.50 61.61 O
ATOM 6 C5' G B 3 -79.362 -48.939 -43.919 0.50 61.37 C
ATOM 7 C4' G B 3 -78.075 -49.100 -43.147 0.50 61.72 C
ATOM 8 O4' G B 3 -78.046 -48.147 -42.051 0.50 62.56 O
ATOM 9 C3' G B 3 -77.870 -50.443 -42.467 0.50 61.22 C
ATOM 10 O3' G B 3 -77.353 -51.409 -43.374 0.50 58.59 O
ATOM 11 C2' G B 3 -76.858 -50.089 -41.386 0.50 61.99 C
ATOM 12 O2' G B 3 -75.543 -49.975 -41.888 0.50 62.83 O
ATOM 13 C1' G B 3 -77.365 -48.715 -40.944 0.50 62.84 C
ATOM 14 N9 G B 3 -78.303 -48.816 -39.830 0.50 63.79 N
ATOM 15 C8 G B 3 -79.622 -48.431 -39.811 0.50 63.86 C
ATOM 16 N7 G B 3 -80.211 -48.677 -38.672 0.50 63.62 N
ATOM 17 C5 G B 3 -79.219 -49.254 -37.891 0.50 64.16 C
ATOM 18 C6 G B 3 -79.264 -49.738 -36.562 0.50 64.56 C
ATOM 19 O6 G B 3 -80.223 -49.756 -35.782 0.50 64.89 O
ATOM 20 N1 G B 3 -78.030 -50.245 -36.160 0.50 65.05 N
ATOM 21 C2 G B 3 -76.897 -50.283 -36.939 0.50 65.39 C
ATOM 22 N2 G B 3 -75.798 -50.817 -36.375 0.50 64.67 N
ATOM 23 N3 G B 3 -76.845 -49.834 -38.181 0.50 65.13 N
ATOM 24 C4 G B 3 -78.033 -49.338 -38.590 0.50 64.30 C
ATOM 25 P G B 4 -77.984 -52.884 -43.403 0.50 56.79 P
ATOM 26 OP1 G B 4 -77.664 -53.499 -44.712 0.50 56.88 O
ATOM 27 OP2 G B 4 -79.398 -52.759 -42.975 0.50 56.02 O
ATOM 28 O5' G B 4 -77.190 -53.675 -42.273 0.50 55.98 O
TER
Atoms:
OP1: (-84.775,-45.152,-44.932)
OP2: (-84.125,-46.838,-43.116)
C3': (-81.056,-47.907,-47.192)
C1': (-82.844,-48.552,-48.588)
C5': (-82.528,-48.252,-45.153)
O4': (-83.094,-49.112,-47.316)
C8: (-83.328,-46.044,-48.636)
O2': (-80.660,-49.423,-49.070)
C6: (-86.812,-45.777,-49.044)
C5: (-85.439,-46.043,-48.893)
C4: (-85.054,-47.371,-48.887)
P: (-83.779,-46.077,-44.340)
C4': (-81.977,-48.845,-46.427)
C2': (-81.345,-48.263,-48.645)
C2: (-87.124,-48.066,-49.156)
N1: (-87.644,-46.833,-49.178)
N3: (-85.856,-48.443,-49.016)
N6: (-87.332,-44.547,-49.058)
N7: (-84.337,-45.213,-48.738)
N9: (-83.692,-47.366,-48.705)
O5': (-83.326,-47.108,-45.465)
O3': (-79.701,-48.184,-46.853)
OP2: (-84.125,-46.838,-43.116)
C3': (-81.056,-47.907,-47.192)
C1': (-82.844,-48.552,-48.588)
C5': (-82.528,-48.252,-45.153)
O4': (-83.094,-49.112,-47.316)
C8: (-83.328,-46.044,-48.636)
O2': (-80.660,-49.423,-49.070)
C6: (-86.812,-45.777,-49.044)
C5: (-85.439,-46.043,-48.893)
C4: (-85.054,-47.371,-48.887)
P: (-83.779,-46.077,-44.340)
C4': (-81.977,-48.845,-46.427)
C2': (-81.345,-48.263,-48.645)
C2: (-87.124,-48.066,-49.156)
N1: (-87.644,-46.833,-49.178)
N3: (-85.856,-48.443,-49.016)
N6: (-87.332,-44.547,-49.058)
N7: (-84.337,-45.213,-48.738)
N9: (-83.692,-47.366,-48.705)
O5': (-83.326,-47.108,-45.465)
O3': (-79.701,-48.184,-46.853)
OP1: (-79.295,-45.809,-46.133)
OP2: (-77.481,-47.610,-45.902)
C3': (-77.870,-50.443,-42.467)
C1': (-77.365,-48.715,-40.944)
C5': (-79.362,-48.939,-43.919)
O6: (-80.223,-49.756,-35.782)
O4': (-78.046,-48.147,-42.051)
C8: (-79.622,-48.431,-39.811)
C2: (-76.897,-50.283,-36.939)
C6: (-79.264,-49.738,-36.562)
C5: (-79.219,-49.254,-37.891)
C4: (-78.033,-49.338,-38.590)
P: (-78.911,-47.214,-45.846)
C4': (-78.075,-49.100,-43.147)
C2': (-76.858,-50.089,-41.386)
O2': (-75.543,-49.975,-41.888)
N1: (-78.030,-50.245,-36.160)
N2: (-75.798,-50.817,-36.375)
N3: (-76.845,-49.834,-38.181)
N7: (-80.211,-48.677,-38.672)
N9: (-78.303,-48.816,-39.830)
O5': (-79.472,-47.605,-44.407)
O3': (-77.353,-51.409,-43.374)
OP2: (-77.481,-47.610,-45.902)
C3': (-77.870,-50.443,-42.467)
C1': (-77.365,-48.715,-40.944)
C5': (-79.362,-48.939,-43.919)
O6: (-80.223,-49.756,-35.782)
O4': (-78.046,-48.147,-42.051)
C8: (-79.622,-48.431,-39.811)
C2: (-76.897,-50.283,-36.939)
C6: (-79.264,-49.738,-36.562)
C5: (-79.219,-49.254,-37.891)
C4: (-78.033,-49.338,-38.590)
P: (-78.911,-47.214,-45.846)
C4': (-78.075,-49.100,-43.147)
C2': (-76.858,-50.089,-41.386)
O2': (-75.543,-49.975,-41.888)
N1: (-78.030,-50.245,-36.160)
N2: (-75.798,-50.817,-36.375)
N3: (-76.845,-49.834,-38.181)
N7: (-80.211,-48.677,-38.672)
N9: (-78.303,-48.816,-39.830)
O5': (-79.472,-47.605,-44.407)
O3': (-77.353,-51.409,-43.374)
Image (generated by PyMOL):