ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIM:A151:A152

Extra

PDB:
ATOM 1 O3' U A 150 59.027 -2.764 26.234 1.00 47.78 O
ATOM 2 P C A 151 58.445 -2.824 27.727 1.00 48.62 P
ATOM 3 OP1 C A 151 59.416 -2.199 28.658 1.00 48.79 O
ATOM 4 OP2 C A 151 58.013 -4.223 27.968 1.00 48.66 O
ATOM 5 O5' C A 151 57.173 -1.853 27.611 1.00 49.32 O
ATOM 6 C5' C A 151 55.975 -2.094 28.351 1.00 50.55 C
ATOM 7 C4' C A 151 54.778 -2.353 27.442 1.00 51.45 C
ATOM 8 O4' C A 151 55.191 -2.819 26.123 1.00 51.84 O
ATOM 9 C3' C A 151 53.795 -3.415 27.930 1.00 51.90 C
ATOM 10 O3' C A 151 52.493 -3.070 27.453 1.00 52.59 O
ATOM 11 C2' C A 151 54.325 -4.661 27.228 1.00 51.87 C
ATOM 12 O2' C A 151 53.378 -5.706 27.196 1.00 51.46 O
ATOM 13 C1' C A 151 54.541 -4.052 25.844 1.00 52.11 C
ATOM 14 N1 C A 151 55.326 -4.871 24.833 1.00 52.35 N
ATOM 15 C2 C A 151 54.735 -5.954 24.142 1.00 52.42 C
ATOM 16 O2 C A 151 53.557 -6.266 24.352 1.00 52.83 O
ATOM 17 N3 C A 151 55.480 -6.650 23.240 1.00 52.27 N
ATOM 18 C4 C A 151 56.753 -6.310 23.012 1.00 52.23 C
ATOM 19 N4 C A 151 57.449 -7.016 22.119 1.00 51.88 N
ATOM 20 C5 C A 151 57.374 -5.219 23.694 1.00 52.47 C
ATOM 21 C6 C A 151 56.631 -4.539 24.580 1.00 52.54 C
ATOM 22 P U A 152 51.262 -2.719 28.419 1.00 53.06 P
ATOM 23 OP1 U A 152 51.789 -2.139 29.678 1.00 53.32 O
ATOM 24 OP2 U A 152 50.406 -3.926 28.466 1.00 52.68 O
ATOM 25 O5' U A 152 50.468 -1.584 27.599 1.00 52.45 O
TER

ATOM 1 O3' C B 151 52.493 -3.070 27.453 1.00 52.59 O
ATOM 2 P U B 152 51.262 -2.719 28.419 1.00 53.06 P
ATOM 3 OP1 U B 152 51.789 -2.139 29.678 1.00 53.32 O
ATOM 4 OP2 U B 152 50.406 -3.926 28.466 1.00 52.68 O
ATOM 5 O5' U B 152 50.468 -1.584 27.599 1.00 52.45 O
ATOM 6 C5' U B 152 50.843 -0.201 27.641 1.00 51.55 C
ATOM 7 C4' U B 152 51.351 0.287 26.290 1.00 51.07 C
ATOM 8 O4' U B 152 52.379 -0.590 25.748 1.00 50.95 O
ATOM 9 C3' U B 152 50.303 0.419 25.179 1.00 50.58 C
ATOM 10 O3' U B 152 50.312 1.753 24.689 1.00 49.81 O
ATOM 11 C2' U B 152 50.796 -0.536 24.097 1.00 50.62 C
ATOM 12 O2' U B 152 50.490 -0.100 22.789 1.00 50.79 O
ATOM 13 C1' U B 152 52.292 -0.412 24.351 1.00 50.61 C
ATOM 14 N1 U B 152 53.199 -1.334 23.577 1.00 50.34 N
ATOM 15 C2 U B 152 54.523 -0.967 23.416 1.00 50.04 C
ATOM 16 O2 U B 152 54.991 0.054 23.885 1.00 49.99 O
ATOM 17 N3 U B 152 55.293 -1.846 22.689 1.00 49.86 N
ATOM 18 C4 U B 152 54.874 -3.032 22.110 1.00 49.79 C
ATOM 19 O4 U B 152 55.674 -3.717 21.485 1.00 49.49 O
ATOM 20 C5 U B 152 53.482 -3.348 22.315 1.00 50.07 C
ATOM 21 C6 U B 152 52.712 -2.506 23.019 1.00 50.31 C
ATOM 22 P C B 153 49.010 2.685 24.729 1.00 49.13 P
ATOM 23 OP1 C B 153 48.058 2.121 25.722 1.00 49.35 O
ATOM 24 OP2 C B 153 48.579 2.918 23.328 1.00 48.70 O
ATOM 25 O5' C B 153 49.612 4.058 25.294 1.00 47.69 O
TER

Atoms:
C2: (54.735,-5.954,24.142)
OP1: (59.416,-2.199,28.658)
OP2: (58.013,-4.223,27.968)
C4: (56.753,-6.310,23.012)
O5': (57.173,-1.853,27.611)
C3': (53.795,-3.415,27.930)
C1': (54.541,-4.052,25.844)
O4': (55.191,-2.819,26.123)
C5': (55.975,-2.094,28.351)
P: (58.445,-2.824,27.727)
O2: (53.557,-6.266,24.352)
C4': (54.778,-2.353,27.442)
C2': (54.325,-4.661,27.228)
O2': (53.378,-5.706,27.196)
N1: (55.326,-4.871,24.833)
N3: (55.480,-6.650,23.240)
N4: (57.449,-7.016,22.119)
C6: (56.631,-4.539,24.580)
C5: (57.374,-5.219,23.694)
O3': (52.493,-3.070,27.453)
C4: (54.874,-3.032,22.110)
N3: (55.293,-1.846,22.689)
OP1: (51.789,-2.139,29.678)
OP2: (50.406,-3.926,28.466)
C2: (54.523,-0.967,23.416)
C1': (52.292,-0.412,24.351)
C3': (50.303,0.419,25.179)
O5': (50.468,-1.584,27.599)
O4': (52.379,-0.590,25.748)
C5': (50.843,-0.201,27.641)
P: (51.262,-2.719,28.419)
C4': (51.351,0.287,26.290)
C2': (50.796,-0.536,24.097)
O2': (50.490,-0.100,22.789)
N1: (53.199,-1.334,23.577)
O4: (55.674,-3.717,21.485)
O2: (54.991,0.054,23.885)
C6: (52.712,-2.506,23.019)
C5: (53.482,-3.348,22.315)
O3': (50.312,1.753,24.689)
Image (generated by PyMOL):
PyMOL image
show in jmol