ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A736:A771

Extra

PDB:
ATOM 1 O3' A A 735 38.925 -12.814 -6.731 1.00 38.89 O
ATOM 2 P G A 736 39.471 -14.236 -7.226 1.00 46.09 P
ATOM 3 OP1 G A 736 39.855 -14.095 -8.653 1.00 26.59 O
ATOM 4 OP2 G A 736 38.450 -15.256 -6.840 1.00 39.97 O
ATOM 5 O5' G A 736 40.785 -14.415 -6.350 1.00 61.91 O
ATOM 6 C5' G A 736 41.900 -13.547 -6.540 1.00 54.25 C
ATOM 7 C4' G A 736 43.016 -13.868 -5.594 1.00 50.65 C
ATOM 8 O4' G A 736 42.494 -13.814 -4.245 1.00 47.76 O
ATOM 9 C3' G A 736 43.608 -15.262 -5.752 1.00 48.74 C
ATOM 10 O3' G A 736 44.965 -15.245 -5.327 1.00 51.72 O
ATOM 11 C2' G A 736 42.792 -16.058 -4.749 1.00 49.48 C
ATOM 12 O2' G A 736 43.399 -17.249 -4.309 1.00 54.77 O
ATOM 13 C1' G A 736 42.671 -15.058 -3.625 1.00 44.49 C
ATOM 14 N9 G A 736 41.538 -15.298 -2.764 1.00 56.80 N
ATOM 15 C8 G A 736 40.304 -15.703 -3.174 1.00 54.20 C
ATOM 16 N7 G A 736 39.497 -15.831 -2.155 1.00 60.81 N
ATOM 17 C5 G A 736 40.250 -15.506 -1.043 1.00 51.66 C
ATOM 18 C6 G A 736 39.906 -15.481 0.309 1.00 50.37 C
ATOM 19 O6 G A 736 38.825 -15.741 0.834 1.00 63.96 O
ATOM 20 N1 G A 736 40.977 -15.103 1.082 1.00 52.87 N
ATOM 21 C2 G A 736 42.217 -14.770 0.633 1.00 52.75 C
ATOM 22 N2 G A 736 43.106 -14.410 1.571 1.00 53.70 N
ATOM 23 N3 G A 736 42.546 -14.786 -0.633 1.00 50.15 N
ATOM 24 C4 G A 736 41.521 -15.172 -1.400 1.00 55.83 C
ATOM 25 P G A 737 46.158 -15.092 -6.391 1.00 49.08 P
ATOM 26 OP1 G A 737 47.337 -14.644 -5.629 1.00 50.07 O
ATOM 27 OP2 G A 737 45.652 -14.245 -7.501 1.00 49.91 O
ATOM 28 O5' G A 737 46.386 -16.582 -6.909 1.00 41.52 O
TER

ATOM 1 O3' U B 770 41.273 -20.665 -6.577 1.00 47.28 O
ATOM 2 P G B 771 42.730 -20.229 -6.072 1.00 45.37 P
ATOM 3 OP1 G B 771 42.864 -20.687 -4.666 1.00 52.02 O
ATOM 4 OP2 G B 771 42.900 -18.790 -6.388 1.00 46.03 O
ATOM 5 O5' G B 771 43.661 -21.076 -6.993 1.00 35.86 O
ATOM 6 C5' G B 771 43.423 -21.085 -8.351 1.00 41.41 C
ATOM 7 C4' G B 771 44.349 -21.989 -9.060 1.00 43.39 C
ATOM 8 O4' G B 771 43.767 -23.314 -9.111 1.00 48.05 O
ATOM 9 C3' G B 771 44.602 -21.587 -10.492 1.00 45.44 C
ATOM 10 O3' G B 771 45.733 -20.736 -10.593 1.00 29.18 O
ATOM 11 C2' G B 771 44.719 -22.911 -11.235 1.00 49.57 C
ATOM 12 O2' G B 771 46.038 -23.424 -11.138 1.00 47.88 O
ATOM 13 C1' G B 771 43.790 -23.812 -10.416 1.00 47.55 C
ATOM 14 N9 G B 771 42.399 -23.811 -10.904 1.00 38.93 N
ATOM 15 C8 G B 771 41.769 -22.968 -11.766 1.00 52.04 C
ATOM 16 N7 G B 771 40.490 -23.243 -11.927 1.00 57.77 N
ATOM 17 C5 G B 771 40.254 -24.331 -11.104 1.00 49.50 C
ATOM 18 C6 G B 771 39.050 -25.074 -10.863 1.00 58.76 C
ATOM 19 O6 G B 771 37.903 -24.918 -11.354 1.00 59.97 O
ATOM 20 N1 G B 771 39.273 -26.088 -9.938 1.00 47.89 N
ATOM 21 C2 G B 771 40.485 -26.335 -9.365 1.00 50.00 C
ATOM 22 N2 G B 771 40.509 -27.360 -8.504 1.00 60.33 N
ATOM 23 N3 G B 771 41.595 -25.656 -9.592 1.00 47.90 N
ATOM 24 C4 G B 771 41.418 -24.669 -10.464 1.00 42.26 C
ATOM 25 P A B 772 46.080 -19.989 -11.969 1.00 36.23 P
ATOM 26 OP1 A B 772 46.832 -18.763 -11.606 1.00 42.80 O
ATOM 27 OP2 A B 772 44.833 -19.847 -12.739 1.00 47.55 O
ATOM 28 O5' A B 772 47.030 -21.055 -12.683 1.00 45.31 O
TER

Atoms:
OP1: (39.855,-14.095,-8.653)
OP2: (38.450,-15.256,-6.840)
C3': (43.608,-15.262,-5.752)
C1': (42.671,-15.058,-3.625)
C5': (41.900,-13.547,-6.540)
O6: (38.825,-15.741,0.834)
O4': (42.494,-13.814,-4.245)
C8: (40.304,-15.703,-3.174)
C2: (42.217,-14.770,0.633)
C6: (39.906,-15.481,0.309)
C5: (40.250,-15.506,-1.043)
C4: (41.521,-15.172,-1.400)
P: (39.471,-14.236,-7.226)
C4': (43.016,-13.868,-5.594)
C2': (42.792,-16.058,-4.749)
O2': (43.399,-17.249,-4.309)
N1: (40.977,-15.103,1.082)
N2: (43.106,-14.410,1.571)
N3: (42.546,-14.786,-0.633)
N7: (39.497,-15.831,-2.155)
N9: (41.538,-15.298,-2.764)
O5': (40.785,-14.415,-6.350)
O3': (44.965,-15.245,-5.327)
OP1: (42.864,-20.687,-4.666)
OP2: (42.900,-18.790,-6.388)
C3': (44.602,-21.587,-10.492)
C1': (43.790,-23.812,-10.416)
C5': (43.423,-21.085,-8.351)
O6: (37.903,-24.918,-11.354)
O4': (43.767,-23.314,-9.111)
C8: (41.769,-22.968,-11.766)
C2: (40.485,-26.335,-9.365)
C6: (39.050,-25.074,-10.863)
C5: (40.254,-24.331,-11.104)
C4: (41.418,-24.669,-10.464)
P: (42.730,-20.229,-6.072)
C4': (44.349,-21.989,-9.060)
C2': (44.719,-22.911,-11.235)
O2': (46.038,-23.424,-11.138)
N1: (39.273,-26.088,-9.938)
N2: (40.509,-27.360,-8.504)
N3: (41.595,-25.656,-9.592)
N7: (40.490,-23.243,-11.927)
N9: (42.399,-23.811,-10.904)
O5': (43.661,-21.076,-6.993)
O3': (45.733,-20.736,-10.593)
Image (generated by PyMOL):
PyMOL image
show in jmol