ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2BH2:C4:C5

Extra

PDB:
ATOM 1 O3' G A 3 67.411 2.045 28.246 1.00 68.46 O
ATOM 2 P A A 4 67.214 0.425 28.129 1.00 71.05 P
ATOM 3 OP1 A A 4 67.129 0.089 26.664 1.00 68.46 O
ATOM 4 OP2 A A 4 66.151 0.074 29.105 1.00 69.97 O
ATOM 5 O5' A A 4 68.562 -0.268 28.711 1.00 70.28 O
ATOM 6 C5' A A 4 69.900 0.177 28.402 1.00 69.08 C
ATOM 7 C4' A A 4 70.874 -0.188 29.531 1.00 70.48 C
ATOM 8 O4' A A 4 70.636 0.589 30.748 1.00 70.55 O
ATOM 9 C3' A A 4 70.843 -1.616 30.094 1.00 72.48 C
ATOM 10 O3' A A 4 71.269 -2.620 29.161 1.00 73.91 O
ATOM 11 C2' A A 4 71.758 -1.451 31.320 1.00 72.42 C
ATOM 12 O2' A A 4 73.155 -1.348 31.047 1.00 72.51 O
ATOM 13 C1' A A 4 71.158 -0.140 31.857 1.00 71.62 C
ATOM 14 N9 A A 4 70.097 -0.495 32.773 1.00 70.05 N
ATOM 15 C8 A A 4 68.742 -0.603 32.550 1.00 71.27 C
ATOM 16 N7 A A 4 68.074 -1.015 33.633 1.00 72.54 N
ATOM 17 C5 A A 4 69.067 -1.196 34.593 1.00 72.68 C
ATOM 18 C6 A A 4 69.048 -1.602 35.946 1.00 75.30 C
ATOM 19 N6 A A 4 67.915 -1.922 36.598 1.00 78.05 N
ATOM 20 N1 A A 4 70.245 -1.669 36.602 1.00 74.76 N
ATOM 21 C2 A A 4 71.373 -1.341 35.952 1.00 71.78 C
ATOM 22 N3 A A 4 71.511 -0.944 34.688 1.00 69.11 N
ATOM 23 C4 A A 4 70.320 -0.888 34.069 1.00 70.94 C
ATOM 24 P A A 5 70.459 -4.035 29.114 1.00 78.66 P
ATOM 25 OP1 A A 5 69.313 -3.776 28.185 1.00 76.12 O
ATOM 26 OP2 A A 5 70.247 -4.540 30.513 1.00 74.83 O
ATOM 27 O5' A A 5 71.493 -4.989 28.329 1.00 77.15 O
TER

ATOM 1 O3' A B 4 71.269 -2.620 29.161 1.00 73.91 O
ATOM 2 P A B 5 70.459 -4.035 29.114 1.00 78.66 P
ATOM 3 OP1 A B 5 69.313 -3.776 28.185 1.00 76.12 O
ATOM 4 OP2 A B 5 70.247 -4.540 30.513 1.00 74.83 O
ATOM 5 O5' A B 5 71.493 -4.989 28.329 1.00 77.15 O
ATOM 6 C5' A B 5 71.201 -5.334 26.962 1.00 76.16 C
ATOM 7 C4' A B 5 72.220 -6.308 26.386 1.00 74.52 C
ATOM 8 O4' A B 5 71.530 -7.455 25.837 1.00 76.46 O
ATOM 9 C3' A B 5 73.031 -5.737 25.236 1.00 71.87 C
ATOM 10 O3' A B 5 74.239 -5.189 25.817 1.00 66.45 O
ATOM 11 C2' A B 5 73.247 -6.927 24.279 1.00 73.63 C
ATOM 12 O2' A B 5 74.578 -7.414 24.398 1.00 75.99 O
ATOM 13 C1' A B 5 72.271 -8.019 24.762 1.00 74.47 C
ATOM 14 N9 A B 5 71.271 -8.692 23.881 1.00 72.99 N
ATOM 15 C8 A B 5 70.644 -8.381 22.680 1.00 69.36 C
ATOM 16 N7 A B 5 69.779 -9.328 22.276 1.00 68.77 N
ATOM 17 C5 A B 5 69.838 -10.304 23.264 1.00 71.81 C
ATOM 18 C6 A B 5 69.214 -11.554 23.463 1.00 73.95 C
ATOM 19 N6 A B 5 68.316 -12.074 22.642 1.00 75.12 N
ATOM 20 N1 A B 5 69.505 -12.272 24.571 1.00 77.83 N
ATOM 21 C2 A B 5 70.409 -11.781 25.443 1.00 78.06 C
ATOM 22 N3 A B 5 71.086 -10.627 25.359 1.00 75.70 N
ATOM 23 C4 A B 5 70.748 -9.929 24.249 1.00 73.37 C
ATOM 24 P A B 6 74.905 -3.864 25.197 1.00 60.39 P
ATOM 25 OP1 A B 6 74.429 -3.811 23.804 1.00 61.91 O
ATOM 26 OP2 A B 6 76.332 -3.792 25.549 1.00 56.70 O
ATOM 27 O5' A B 6 74.171 -2.689 26.019 1.00 55.85 O
TER

Atoms:
OP1: (67.129,0.089,26.664)
OP2: (66.151,0.074,29.105)
C3': (70.843,-1.616,30.094)
C1': (71.158,-0.140,31.857)
C5': (69.900,0.177,28.402)
O4': (70.636,0.589,30.748)
C8: (68.742,-0.603,32.550)
O2': (73.155,-1.348,31.047)
C6: (69.048,-1.602,35.946)
C5: (69.067,-1.196,34.593)
C4: (70.320,-0.888,34.069)
P: (67.214,0.425,28.129)
C4': (70.874,-0.188,29.531)
C2': (71.758,-1.451,31.320)
C2: (71.373,-1.341,35.952)
N1: (70.245,-1.669,36.602)
N3: (71.511,-0.944,34.688)
N6: (67.915,-1.922,36.598)
N7: (68.074,-1.015,33.633)
N9: (70.097,-0.495,32.773)
O5': (68.562,-0.268,28.711)
O3': (71.269,-2.620,29.161)
OP1: (69.313,-3.776,28.185)
OP2: (70.247,-4.540,30.513)
C3': (73.031,-5.737,25.236)
C1': (72.271,-8.019,24.762)
C5': (71.201,-5.334,26.962)
O4': (71.530,-7.455,25.837)
C8: (70.644,-8.381,22.680)
O2': (74.578,-7.414,24.398)
C6: (69.214,-11.554,23.463)
C5: (69.838,-10.304,23.264)
C4: (70.748,-9.929,24.249)
P: (70.459,-4.035,29.114)
C4': (72.220,-6.308,26.386)
C2': (73.247,-6.927,24.279)
C2: (70.409,-11.781,25.443)
N1: (69.505,-12.272,24.571)
N3: (71.086,-10.627,25.359)
N6: (68.316,-12.074,22.642)
N7: (69.779,-9.328,22.276)
N9: (71.271,-8.692,23.881)
O5': (71.493,-4.989,28.329)
O3': (74.239,-5.189,25.817)
Image (generated by PyMOL):
PyMOL image
show in jmol