ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2BH2:D4:D5

Extra

PDB:
ATOM 1 O3' G A 3 48.352 -19.077 20.604 1.00 45.50 O
ATOM 2 P A A 4 48.753 -18.124 21.846 1.00 51.23 P
ATOM 3 OP1 A A 4 48.383 -16.776 21.346 1.00 51.16 O
ATOM 4 OP2 A A 4 50.143 -18.463 22.287 1.00 51.29 O
ATOM 5 O5' A A 4 47.803 -18.443 23.107 1.00 47.70 O
ATOM 6 C5' A A 4 46.377 -18.313 22.998 1.00 49.20 C
ATOM 7 C4' A A 4 45.695 -19.215 24.013 1.00 49.55 C
ATOM 8 O4' A A 4 46.054 -20.616 23.772 1.00 48.31 O
ATOM 9 C3' A A 4 46.148 -18.982 25.439 1.00 52.17 C
ATOM 10 O3' A A 4 45.661 -17.724 25.968 1.00 54.98 O
ATOM 11 C2' A A 4 45.702 -20.291 26.097 1.00 52.72 C
ATOM 12 O2' A A 4 44.315 -20.489 26.299 1.00 55.19 O
ATOM 13 C1' A A 4 46.186 -21.280 25.030 1.00 50.51 C
ATOM 14 N9 A A 4 47.571 -21.718 25.246 1.00 49.20 N
ATOM 15 C8 A A 4 48.720 -21.278 24.636 1.00 47.58 C
ATOM 16 N7 A A 4 49.804 -21.876 25.058 1.00 48.20 N
ATOM 17 C5 A A 4 49.344 -22.792 25.997 1.00 51.28 C
ATOM 18 C6 A A 4 49.997 -23.745 26.828 1.00 55.24 C
ATOM 19 N6 A A 4 51.338 -23.919 26.805 1.00 55.71 N
ATOM 20 N1 A A 4 49.228 -24.506 27.674 1.00 54.41 N
ATOM 21 C2 A A 4 47.888 -24.315 27.677 1.00 54.67 C
ATOM 22 N3 A A 4 47.160 -23.446 26.939 1.00 52.22 N
ATOM 23 C4 A A 4 47.957 -22.713 26.119 1.00 52.31 C
ATOM 24 P A A 5 46.740 -16.685 26.600 1.00 59.52 P
ATOM 25 OP1 A A 5 47.517 -15.953 25.548 1.00 59.62 O
ATOM 26 OP2 A A 5 47.453 -17.395 27.676 1.00 59.99 O
ATOM 27 O5' A A 5 45.888 -15.492 27.172 1.00 57.95 O
TER

ATOM 1 O3' A B 4 45.661 -17.724 25.968 1.00 54.98 O
ATOM 2 P A B 5 46.740 -16.685 26.600 1.00 59.52 P
ATOM 3 OP1 A B 5 47.517 -15.953 25.548 1.00 59.62 O
ATOM 4 OP2 A B 5 47.453 -17.395 27.676 1.00 59.99 O
ATOM 5 O5' A B 5 45.888 -15.492 27.172 1.00 57.95 O
ATOM 6 C5' A B 5 44.713 -15.754 27.868 1.00 59.81 C
ATOM 7 C4' A B 5 44.127 -14.442 28.358 1.00 59.86 C
ATOM 8 O4' A B 5 45.082 -13.377 28.565 1.00 62.31 O
ATOM 9 C3' A B 5 43.199 -13.681 27.433 1.00 56.57 C
ATOM 10 O3' A B 5 42.149 -14.528 27.204 1.00 53.34 O
ATOM 11 C2' A B 5 42.855 -12.523 28.371 1.00 60.70 C
ATOM 12 O2' A B 5 41.860 -12.842 29.375 1.00 57.78 O
ATOM 13 C1' A B 5 44.266 -12.262 28.967 1.00 62.70 C
ATOM 14 N9 A B 5 44.998 -11.043 28.554 1.00 63.78 N
ATOM 15 C8 A B 5 45.188 -10.473 27.304 1.00 63.63 C
ATOM 16 N7 A B 5 45.925 -9.375 27.302 1.00 63.00 N
ATOM 17 C5 A B 5 46.270 -9.257 28.628 1.00 64.96 C
ATOM 18 C6 A B 5 47.052 -8.321 29.314 1.00 67.55 C
ATOM 19 N6 A B 5 47.635 -7.314 28.711 1.00 71.43 N
ATOM 20 N1 A B 5 47.224 -8.469 30.648 1.00 69.90 N
ATOM 21 C2 A B 5 46.599 -9.518 31.254 1.00 69.26 C
ATOM 22 N3 A B 5 45.827 -10.476 30.712 1.00 65.36 N
ATOM 23 C4 A B 5 45.715 -10.268 29.402 1.00 64.16 C
ATOM 24 P A B 6 41.445 -14.628 25.791 1.00 49.17 P
ATOM 25 OP1 A B 6 41.689 -13.304 25.142 1.00 45.32 O
ATOM 26 OP2 A B 6 40.123 -15.188 26.180 1.00 45.17 O
ATOM 27 O5' A B 6 42.280 -15.805 25.090 1.00 43.49 O
TER

Atoms:
OP1: (48.383,-16.776,21.346)
OP2: (50.143,-18.463,22.287)
C3': (46.148,-18.982,25.439)
C1': (46.186,-21.280,25.030)
C5': (46.377,-18.313,22.998)
O4': (46.054,-20.616,23.772)
C8: (48.720,-21.278,24.636)
O2': (44.315,-20.489,26.299)
C6: (49.997,-23.745,26.828)
C5: (49.344,-22.792,25.997)
C4: (47.957,-22.713,26.119)
P: (48.753,-18.124,21.846)
C4': (45.695,-19.215,24.013)
C2': (45.702,-20.291,26.097)
C2: (47.888,-24.315,27.677)
N1: (49.228,-24.506,27.674)
N3: (47.160,-23.446,26.939)
N6: (51.338,-23.919,26.805)
N7: (49.804,-21.876,25.058)
N9: (47.571,-21.718,25.246)
O5': (47.803,-18.443,23.107)
O3': (45.661,-17.724,25.968)
OP1: (47.517,-15.953,25.548)
OP2: (47.453,-17.395,27.676)
C3': (43.199,-13.681,27.433)
C1': (44.266,-12.262,28.967)
C5': (44.713,-15.754,27.868)
O4': (45.082,-13.377,28.565)
C8: (45.188,-10.473,27.304)
O2': (41.860,-12.842,29.375)
C6: (47.052,-8.321,29.314)
C5: (46.270,-9.257,28.628)
C4: (45.715,-10.268,29.402)
P: (46.740,-16.685,26.600)
C4': (44.127,-14.442,28.358)
C2': (42.855,-12.523,28.371)
C2: (46.599,-9.518,31.254)
N1: (47.224,-8.469,30.648)
N3: (45.827,-10.476,30.712)
N6: (47.635,-7.314,28.711)
N7: (45.925,-9.375,27.302)
N9: (44.998,-11.043,28.554)
O5': (45.888,-15.492,27.172)
O3': (42.149,-14.528,27.204)
Image (generated by PyMOL):
PyMOL image
show in jmol