Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BQ5:S4:S5
Extra
PDB:
ATOM 1 O3' G A 3 1.857 103.576 -7.778 0.50 49.61 O
ATOM 2 P A A 4 1.595 105.110 -7.426 0.50 46.44 P
ATOM 3 OP1 A A 4 2.873 105.837 -7.621 0.50 45.05 O
ATOM 4 OP2 A A 4 0.939 105.122 -6.094 0.50 46.40 O
ATOM 5 O5' A A 4 0.553 105.579 -8.538 0.50 46.17 O
ATOM 6 C5' A A 4 -0.855 105.384 -8.373 0.50 45.52 C
ATOM 7 C4' A A 4 -1.572 105.680 -9.671 0.50 44.69 C
ATOM 8 O4' A A 4 -1.252 107.036 -10.070 0.50 44.72 O
ATOM 9 C3' A A 4 -1.145 104.789 -10.830 0.50 44.11 C
ATOM 10 O3' A A 4 -2.071 103.720 -10.967 0.50 44.29 O
ATOM 11 C2' A A 4 -1.224 105.724 -12.029 0.50 43.89 C
ATOM 12 O2' A A 4 -2.533 105.843 -12.544 0.50 43.47 O
ATOM 13 C1' A A 4 -0.792 107.050 -11.405 0.50 44.45 C
ATOM 14 N9 A A 4 0.656 107.238 -11.349 0.50 45.06 N
ATOM 15 C8 A A 4 1.651 106.325 -11.597 0.50 45.61 C
ATOM 16 N7 A A 4 2.860 106.798 -11.412 0.50 45.95 N
ATOM 17 C5 A A 4 2.646 108.114 -11.026 0.50 45.69 C
ATOM 18 C6 A A 4 3.525 109.150 -10.672 0.50 45.98 C
ATOM 19 N6 A A 4 4.853 109.015 -10.640 0.50 46.71 N
ATOM 20 N1 A A 4 2.987 110.345 -10.343 0.50 45.69 N
ATOM 21 C2 A A 4 1.655 110.475 -10.364 0.50 45.09 C
ATOM 22 N3 A A 4 0.726 109.575 -10.671 0.50 44.84 N
ATOM 23 C4 A A 4 1.294 108.402 -10.997 0.50 45.27 C
ATOM 24 P G A 5 -1.652 102.239 -10.524 0.50 44.52 P
ATOM 25 OP1 G A 5 -0.260 101.990 -10.974 0.50 44.42 O
ATOM 26 OP2 G A 5 -2.744 101.332 -10.964 0.50 43.61 O
ATOM 27 O5' G A 5 -1.657 102.293 -8.934 0.50 46.00 O
TER
ATOM 1 O3' A B 4 -2.071 103.720 -10.967 0.50 44.29 O
ATOM 2 P G B 5 -1.652 102.239 -10.524 0.50 44.52 P
ATOM 3 OP1 G B 5 -0.260 101.990 -10.974 0.50 44.42 O
ATOM 4 OP2 G B 5 -2.744 101.332 -10.964 0.50 43.61 O
ATOM 5 O5' G B 5 -1.657 102.293 -8.934 0.50 46.00 O
ATOM 6 C5' G B 5 -2.800 102.757 -8.223 0.50 48.59 C
ATOM 7 C4' G B 5 -3.650 101.588 -7.793 0.50 50.67 C
ATOM 8 O4' G B 5 -2.828 100.636 -7.063 0.50 51.62 O
ATOM 9 C3' G B 5 -4.770 101.918 -6.823 0.50 51.95 C
ATOM 10 O3' G B 5 -5.919 102.430 -7.482 0.50 52.94 O
ATOM 11 C2' G B 5 -5.014 100.567 -6.169 0.50 52.09 C
ATOM 12 O2' G B 5 -5.723 99.671 -7.002 0.50 52.41 O
ATOM 13 C1' G B 5 -3.576 100.080 -5.991 0.50 51.82 C
ATOM 14 N9 G B 5 -3.007 100.574 -4.743 0.50 51.78 N
ATOM 15 C8 G B 5 -1.985 101.482 -4.597 0.50 52.19 C
ATOM 16 N7 G B 5 -1.707 101.744 -3.349 0.50 52.05 N
ATOM 17 C5 G B 5 -2.598 100.960 -2.629 0.50 51.52 C
ATOM 18 C6 G B 5 -2.772 100.819 -1.229 0.50 51.43 C
ATOM 19 O6 G B 5 -2.153 101.381 -0.313 0.50 50.72 O
ATOM 20 N1 G B 5 -3.786 99.911 -0.932 0.50 51.13 N
ATOM 21 C2 G B 5 -4.535 99.229 -1.862 0.50 50.80 C
ATOM 22 N2 G B 5 -5.465 98.393 -1.381 0.50 50.26 N
ATOM 23 N3 G B 5 -4.382 99.355 -3.168 0.50 50.72 N
ATOM 24 C4 G B 5 -3.403 100.229 -3.478 0.50 51.32 C
ATOM 25 P G B 6 -6.678 103.704 -6.862 0.50 54.00 P
ATOM 26 OP1 G B 6 -7.217 104.519 -7.980 0.50 53.85 O
ATOM 27 OP2 G B 6 -5.738 104.325 -5.886 0.50 53.47 O
ATOM 28 O5' G B 6 -7.907 103.079 -6.058 0.50 52.78 O
TER
ATOM 2 P A A 4 1.595 105.110 -7.426 0.50 46.44 P
ATOM 3 OP1 A A 4 2.873 105.837 -7.621 0.50 45.05 O
ATOM 4 OP2 A A 4 0.939 105.122 -6.094 0.50 46.40 O
ATOM 5 O5' A A 4 0.553 105.579 -8.538 0.50 46.17 O
ATOM 6 C5' A A 4 -0.855 105.384 -8.373 0.50 45.52 C
ATOM 7 C4' A A 4 -1.572 105.680 -9.671 0.50 44.69 C
ATOM 8 O4' A A 4 -1.252 107.036 -10.070 0.50 44.72 O
ATOM 9 C3' A A 4 -1.145 104.789 -10.830 0.50 44.11 C
ATOM 10 O3' A A 4 -2.071 103.720 -10.967 0.50 44.29 O
ATOM 11 C2' A A 4 -1.224 105.724 -12.029 0.50 43.89 C
ATOM 12 O2' A A 4 -2.533 105.843 -12.544 0.50 43.47 O
ATOM 13 C1' A A 4 -0.792 107.050 -11.405 0.50 44.45 C
ATOM 14 N9 A A 4 0.656 107.238 -11.349 0.50 45.06 N
ATOM 15 C8 A A 4 1.651 106.325 -11.597 0.50 45.61 C
ATOM 16 N7 A A 4 2.860 106.798 -11.412 0.50 45.95 N
ATOM 17 C5 A A 4 2.646 108.114 -11.026 0.50 45.69 C
ATOM 18 C6 A A 4 3.525 109.150 -10.672 0.50 45.98 C
ATOM 19 N6 A A 4 4.853 109.015 -10.640 0.50 46.71 N
ATOM 20 N1 A A 4 2.987 110.345 -10.343 0.50 45.69 N
ATOM 21 C2 A A 4 1.655 110.475 -10.364 0.50 45.09 C
ATOM 22 N3 A A 4 0.726 109.575 -10.671 0.50 44.84 N
ATOM 23 C4 A A 4 1.294 108.402 -10.997 0.50 45.27 C
ATOM 24 P G A 5 -1.652 102.239 -10.524 0.50 44.52 P
ATOM 25 OP1 G A 5 -0.260 101.990 -10.974 0.50 44.42 O
ATOM 26 OP2 G A 5 -2.744 101.332 -10.964 0.50 43.61 O
ATOM 27 O5' G A 5 -1.657 102.293 -8.934 0.50 46.00 O
TER
ATOM 1 O3' A B 4 -2.071 103.720 -10.967 0.50 44.29 O
ATOM 2 P G B 5 -1.652 102.239 -10.524 0.50 44.52 P
ATOM 3 OP1 G B 5 -0.260 101.990 -10.974 0.50 44.42 O
ATOM 4 OP2 G B 5 -2.744 101.332 -10.964 0.50 43.61 O
ATOM 5 O5' G B 5 -1.657 102.293 -8.934 0.50 46.00 O
ATOM 6 C5' G B 5 -2.800 102.757 -8.223 0.50 48.59 C
ATOM 7 C4' G B 5 -3.650 101.588 -7.793 0.50 50.67 C
ATOM 8 O4' G B 5 -2.828 100.636 -7.063 0.50 51.62 O
ATOM 9 C3' G B 5 -4.770 101.918 -6.823 0.50 51.95 C
ATOM 10 O3' G B 5 -5.919 102.430 -7.482 0.50 52.94 O
ATOM 11 C2' G B 5 -5.014 100.567 -6.169 0.50 52.09 C
ATOM 12 O2' G B 5 -5.723 99.671 -7.002 0.50 52.41 O
ATOM 13 C1' G B 5 -3.576 100.080 -5.991 0.50 51.82 C
ATOM 14 N9 G B 5 -3.007 100.574 -4.743 0.50 51.78 N
ATOM 15 C8 G B 5 -1.985 101.482 -4.597 0.50 52.19 C
ATOM 16 N7 G B 5 -1.707 101.744 -3.349 0.50 52.05 N
ATOM 17 C5 G B 5 -2.598 100.960 -2.629 0.50 51.52 C
ATOM 18 C6 G B 5 -2.772 100.819 -1.229 0.50 51.43 C
ATOM 19 O6 G B 5 -2.153 101.381 -0.313 0.50 50.72 O
ATOM 20 N1 G B 5 -3.786 99.911 -0.932 0.50 51.13 N
ATOM 21 C2 G B 5 -4.535 99.229 -1.862 0.50 50.80 C
ATOM 22 N2 G B 5 -5.465 98.393 -1.381 0.50 50.26 N
ATOM 23 N3 G B 5 -4.382 99.355 -3.168 0.50 50.72 N
ATOM 24 C4 G B 5 -3.403 100.229 -3.478 0.50 51.32 C
ATOM 25 P G B 6 -6.678 103.704 -6.862 0.50 54.00 P
ATOM 26 OP1 G B 6 -7.217 104.519 -7.980 0.50 53.85 O
ATOM 27 OP2 G B 6 -5.738 104.325 -5.886 0.50 53.47 O
ATOM 28 O5' G B 6 -7.907 103.079 -6.058 0.50 52.78 O
TER
Atoms:
OP1: (2.873,105.837,-7.621)
OP2: (0.939,105.122,-6.094)
C3': (-1.145,104.789,-10.830)
C1': (-0.792,107.050,-11.405)
C5': (-0.855,105.384,-8.373)
O4': (-1.252,107.036,-10.070)
C8: (1.651,106.325,-11.597)
O2': (-2.533,105.843,-12.544)
C6: (3.525,109.150,-10.672)
C5: (2.646,108.114,-11.026)
C4: (1.294,108.402,-10.997)
P: (1.595,105.110,-7.426)
C4': (-1.572,105.680,-9.671)
C2': (-1.224,105.724,-12.029)
C2: (1.655,110.475,-10.364)
N1: (2.987,110.345,-10.343)
N3: (0.726,109.575,-10.671)
N6: (4.853,109.015,-10.640)
N7: (2.860,106.798,-11.412)
N9: (0.656,107.238,-11.349)
O5': (0.553,105.579,-8.538)
O3': (-2.071,103.720,-10.967)
OP2: (0.939,105.122,-6.094)
C3': (-1.145,104.789,-10.830)
C1': (-0.792,107.050,-11.405)
C5': (-0.855,105.384,-8.373)
O4': (-1.252,107.036,-10.070)
C8: (1.651,106.325,-11.597)
O2': (-2.533,105.843,-12.544)
C6: (3.525,109.150,-10.672)
C5: (2.646,108.114,-11.026)
C4: (1.294,108.402,-10.997)
P: (1.595,105.110,-7.426)
C4': (-1.572,105.680,-9.671)
C2': (-1.224,105.724,-12.029)
C2: (1.655,110.475,-10.364)
N1: (2.987,110.345,-10.343)
N3: (0.726,109.575,-10.671)
N6: (4.853,109.015,-10.640)
N7: (2.860,106.798,-11.412)
N9: (0.656,107.238,-11.349)
O5': (0.553,105.579,-8.538)
O3': (-2.071,103.720,-10.967)
OP1: (-0.260,101.990,-10.974)
OP2: (-2.744,101.332,-10.964)
C3': (-4.770,101.918,-6.823)
C1': (-3.576,100.080,-5.991)
C5': (-2.800,102.757,-8.223)
O6: (-2.153,101.381,-0.313)
O4': (-2.828,100.636,-7.063)
C8: (-1.985,101.482,-4.597)
C2: (-4.535,99.229,-1.862)
C6: (-2.772,100.819,-1.229)
C5: (-2.598,100.960,-2.629)
C4: (-3.403,100.229,-3.478)
P: (-1.652,102.239,-10.524)
C4': (-3.650,101.588,-7.793)
C2': (-5.014,100.567,-6.169)
O2': (-5.723,99.671,-7.002)
N1: (-3.786,99.911,-0.932)
N2: (-5.465,98.393,-1.381)
N3: (-4.382,99.355,-3.168)
N7: (-1.707,101.744,-3.349)
N9: (-3.007,100.574,-4.743)
O5': (-1.657,102.293,-8.934)
O3': (-5.919,102.430,-7.482)
OP2: (-2.744,101.332,-10.964)
C3': (-4.770,101.918,-6.823)
C1': (-3.576,100.080,-5.991)
C5': (-2.800,102.757,-8.223)
O6: (-2.153,101.381,-0.313)
O4': (-2.828,100.636,-7.063)
C8: (-1.985,101.482,-4.597)
C2: (-4.535,99.229,-1.862)
C6: (-2.772,100.819,-1.229)
C5: (-2.598,100.960,-2.629)
C4: (-3.403,100.229,-3.478)
P: (-1.652,102.239,-10.524)
C4': (-3.650,101.588,-7.793)
C2': (-5.014,100.567,-6.169)
O2': (-5.723,99.671,-7.002)
N1: (-3.786,99.911,-0.932)
N2: (-5.465,98.393,-1.381)
N3: (-4.382,99.355,-3.168)
N7: (-1.707,101.744,-3.349)
N9: (-3.007,100.574,-4.743)
O5': (-1.657,102.293,-8.934)
O3': (-5.919,102.430,-7.482)
Image (generated by PyMOL):