Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:A4:A5
Extra
PDB:
ATOM 1 O3' U A 3 10.254 -28.034 -3.912 1.00114.60 O
ATOM 2 P C A 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 3 OP1 C A 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 4 OP2 C A 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 5 O5' C A 4 10.377 -27.558 -1.470 1.00109.52 O
ATOM 6 C5' C A 4 10.840 -26.236 -1.722 1.00109.92 C
ATOM 7 C4' C A 4 10.040 -25.213 -0.941 1.00109.10 C
ATOM 8 O4' C A 4 8.713 -25.085 -1.506 1.00110.27 O
ATOM 9 C3' C A 4 9.758 -25.560 0.512 1.00106.20 C
ATOM 10 O3' C A 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 11 C2' C A 4 8.625 -24.591 0.805 1.00107.20 C
ATOM 12 O2' C A 4 9.065 -23.264 1.005 1.00108.50 O
ATOM 13 C1' C A 4 7.810 -24.698 -0.480 1.00109.45 C
ATOM 14 N1 C A 4 6.655 -25.663 -0.319 1.00109.00 N
ATOM 15 C2 C A 4 6.720 -27.028 -0.690 1.00108.80 C
ATOM 16 O2 C A 4 7.742 -27.513 -1.192 1.00109.77 O
ATOM 17 N3 C A 4 5.636 -27.823 -0.495 1.00107.83 N
ATOM 18 C4 C A 4 4.530 -27.318 0.045 1.00107.49 C
ATOM 19 N4 C A 4 3.495 -28.144 0.215 1.00106.92 N
ATOM 20 C5 C A 4 4.445 -25.948 0.435 1.00107.94 C
ATOM 21 C6 C A 4 5.510 -25.168 0.241 1.00108.51 C
ATOM 22 P U A 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 23 OP1 U A 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 24 OP2 U A 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 25 O5' U A 5 10.038 -25.882 3.614 1.00100.64 O
TER
ATOM 1 O3' C B 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 2 P U B 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 3 OP1 U B 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 4 OP2 U B 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 5 O5' U B 5 10.038 -25.882 3.614 1.00100.64 O
ATOM 6 C5' U B 5 10.073 -24.595 4.214 1.00100.96 C
ATOM 7 C4' U B 5 8.792 -24.325 4.971 1.00100.31 C
ATOM 8 O4' U B 5 7.666 -24.417 4.066 1.00101.47 O
ATOM 9 C3' U B 5 8.459 -25.342 6.047 1.00 98.22 C
ATOM 10 O3' U B 5 9.190 -25.093 7.231 1.00 97.12 O
ATOM 11 C2' U B 5 6.965 -25.105 6.212 1.00 98.66 C
ATOM 12 O2' U B 5 6.652 -23.935 6.937 1.00 99.54 O
ATOM 13 C1' U B 5 6.545 -24.948 4.753 1.00100.41 C
ATOM 14 N1 U B 5 6.085 -26.252 4.155 1.00100.14 N
ATOM 15 C2 U B 5 4.800 -26.676 4.428 1.00 99.95 C
ATOM 16 O2 U B 5 4.022 -26.041 5.116 1.00 99.94 O
ATOM 17 N3 U B 5 4.450 -27.879 3.861 1.00100.18 N
ATOM 18 C4 U B 5 5.241 -28.692 3.066 1.00100.63 C
ATOM 19 O4 U B 5 4.784 -29.745 2.627 1.00101.04 O
ATOM 20 C5 U B 5 6.570 -28.189 2.824 1.00100.84 C
ATOM 21 C6 U B 5 6.931 -27.018 3.368 1.00100.78 C
ATOM 22 P G B 6 9.693 -26.326 8.119 1.00 94.97 P
ATOM 23 OP1 G B 6 10.853 -25.861 8.915 1.00 94.83 O
ATOM 24 OP2 G B 6 9.821 -27.532 7.267 1.00 94.19 O
ATOM 25 O5' G B 6 8.447 -26.540 9.093 1.00 94.23 O
TER
ATOM 2 P C A 4 10.670 -28.723 -2.523 1.00111.12 P
ATOM 3 OP1 C A 4 12.129 -28.973 -2.566 1.00110.78 O
ATOM 4 OP2 C A 4 9.752 -29.848 -2.231 1.00109.50 O
ATOM 5 O5' C A 4 10.377 -27.558 -1.470 1.00109.52 O
ATOM 6 C5' C A 4 10.840 -26.236 -1.722 1.00109.92 C
ATOM 7 C4' C A 4 10.040 -25.213 -0.941 1.00109.10 C
ATOM 8 O4' C A 4 8.713 -25.085 -1.506 1.00110.27 O
ATOM 9 C3' C A 4 9.758 -25.560 0.512 1.00106.20 C
ATOM 10 O3' C A 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 11 C2' C A 4 8.625 -24.591 0.805 1.00107.20 C
ATOM 12 O2' C A 4 9.065 -23.264 1.005 1.00108.50 O
ATOM 13 C1' C A 4 7.810 -24.698 -0.480 1.00109.45 C
ATOM 14 N1 C A 4 6.655 -25.663 -0.319 1.00109.00 N
ATOM 15 C2 C A 4 6.720 -27.028 -0.690 1.00108.80 C
ATOM 16 O2 C A 4 7.742 -27.513 -1.192 1.00109.77 O
ATOM 17 N3 C A 4 5.636 -27.823 -0.495 1.00107.83 N
ATOM 18 C4 C A 4 4.530 -27.318 0.045 1.00107.49 C
ATOM 19 N4 C A 4 3.495 -28.144 0.215 1.00106.92 N
ATOM 20 C5 C A 4 4.445 -25.948 0.435 1.00107.94 C
ATOM 21 C6 C A 4 5.510 -25.168 0.241 1.00108.51 C
ATOM 22 P U A 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 23 OP1 U A 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 24 OP2 U A 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 25 O5' U A 5 10.038 -25.882 3.614 1.00100.64 O
TER
ATOM 1 O3' C B 4 10.882 -25.321 1.336 1.00104.64 O
ATOM 2 P U B 5 11.173 -26.293 2.571 1.00101.79 P
ATOM 3 OP1 U B 5 12.496 -25.941 3.135 1.00101.19 O
ATOM 4 OP2 U B 5 10.914 -27.683 2.135 1.00101.33 O
ATOM 5 O5' U B 5 10.038 -25.882 3.614 1.00100.64 O
ATOM 6 C5' U B 5 10.073 -24.595 4.214 1.00100.96 C
ATOM 7 C4' U B 5 8.792 -24.325 4.971 1.00100.31 C
ATOM 8 O4' U B 5 7.666 -24.417 4.066 1.00101.47 O
ATOM 9 C3' U B 5 8.459 -25.342 6.047 1.00 98.22 C
ATOM 10 O3' U B 5 9.190 -25.093 7.231 1.00 97.12 O
ATOM 11 C2' U B 5 6.965 -25.105 6.212 1.00 98.66 C
ATOM 12 O2' U B 5 6.652 -23.935 6.937 1.00 99.54 O
ATOM 13 C1' U B 5 6.545 -24.948 4.753 1.00100.41 C
ATOM 14 N1 U B 5 6.085 -26.252 4.155 1.00100.14 N
ATOM 15 C2 U B 5 4.800 -26.676 4.428 1.00 99.95 C
ATOM 16 O2 U B 5 4.022 -26.041 5.116 1.00 99.94 O
ATOM 17 N3 U B 5 4.450 -27.879 3.861 1.00100.18 N
ATOM 18 C4 U B 5 5.241 -28.692 3.066 1.00100.63 C
ATOM 19 O4 U B 5 4.784 -29.745 2.627 1.00101.04 O
ATOM 20 C5 U B 5 6.570 -28.189 2.824 1.00100.84 C
ATOM 21 C6 U B 5 6.931 -27.018 3.368 1.00100.78 C
ATOM 22 P G B 6 9.693 -26.326 8.119 1.00 94.97 P
ATOM 23 OP1 G B 6 10.853 -25.861 8.915 1.00 94.83 O
ATOM 24 OP2 G B 6 9.821 -27.532 7.267 1.00 94.19 O
ATOM 25 O5' G B 6 8.447 -26.540 9.093 1.00 94.23 O
TER
Atoms:
C2: (6.720,-27.028,-0.690)
OP1: (12.129,-28.973,-2.566)
OP2: (9.752,-29.848,-2.231)
C4: (4.530,-27.318,0.045)
O5': (10.377,-27.558,-1.470)
C3': (9.758,-25.560,0.512)
C1': (7.810,-24.698,-0.480)
O4': (8.713,-25.085,-1.506)
C5': (10.840,-26.236,-1.722)
P: (10.670,-28.723,-2.523)
O2: (7.742,-27.513,-1.192)
C4': (10.040,-25.213,-0.941)
C2': (8.625,-24.591,0.805)
O2': (9.065,-23.264,1.005)
N1: (6.655,-25.663,-0.319)
N3: (5.636,-27.823,-0.495)
N4: (3.495,-28.144,0.215)
C6: (5.510,-25.168,0.241)
C5: (4.445,-25.948,0.435)
O3': (10.882,-25.321,1.336)
OP1: (12.129,-28.973,-2.566)
OP2: (9.752,-29.848,-2.231)
C4: (4.530,-27.318,0.045)
O5': (10.377,-27.558,-1.470)
C3': (9.758,-25.560,0.512)
C1': (7.810,-24.698,-0.480)
O4': (8.713,-25.085,-1.506)
C5': (10.840,-26.236,-1.722)
P: (10.670,-28.723,-2.523)
O2: (7.742,-27.513,-1.192)
C4': (10.040,-25.213,-0.941)
C2': (8.625,-24.591,0.805)
O2': (9.065,-23.264,1.005)
N1: (6.655,-25.663,-0.319)
N3: (5.636,-27.823,-0.495)
N4: (3.495,-28.144,0.215)
C6: (5.510,-25.168,0.241)
C5: (4.445,-25.948,0.435)
O3': (10.882,-25.321,1.336)
C4: (5.241,-28.692,3.066)
N3: (4.450,-27.879,3.861)
OP1: (12.496,-25.941,3.135)
OP2: (10.914,-27.683,2.135)
C2: (4.800,-26.676,4.428)
C1': (6.545,-24.948,4.753)
C3': (8.459,-25.342,6.047)
O5': (10.038,-25.882,3.614)
O4': (7.666,-24.417,4.066)
C5': (10.073,-24.595,4.214)
P: (11.173,-26.293,2.571)
C4': (8.792,-24.325,4.971)
C2': (6.965,-25.105,6.212)
O2': (6.652,-23.935,6.937)
N1: (6.085,-26.252,4.155)
O4: (4.784,-29.745,2.627)
O2: (4.022,-26.041,5.116)
C6: (6.931,-27.018,3.368)
C5: (6.570,-28.189,2.824)
O3': (9.190,-25.093,7.231)
N3: (4.450,-27.879,3.861)
OP1: (12.496,-25.941,3.135)
OP2: (10.914,-27.683,2.135)
C2: (4.800,-26.676,4.428)
C1': (6.545,-24.948,4.753)
C3': (8.459,-25.342,6.047)
O5': (10.038,-25.882,3.614)
O4': (7.666,-24.417,4.066)
C5': (10.073,-24.595,4.214)
P: (11.173,-26.293,2.571)
C4': (8.792,-24.325,4.971)
C2': (6.965,-25.105,6.212)
O2': (6.652,-23.935,6.937)
N1: (6.085,-26.252,4.155)
O4: (4.784,-29.745,2.627)
O2: (4.022,-26.041,5.116)
C6: (6.931,-27.018,3.368)
C5: (6.570,-28.189,2.824)
O3': (9.190,-25.093,7.231)
Image (generated by PyMOL):