Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:B21:B71
Extra
PDB:
ATOM 1 O3' U A 20 -2.414 5.418 -18.033 1.00 65.50 O
ATOM 2 P C A 21 -2.159 4.624 -16.667 1.00 66.25 P
ATOM 3 OP1 C A 21 -3.169 3.556 -16.555 1.00 65.43 O
ATOM 4 OP2 C A 21 -2.010 5.620 -15.577 1.00 66.83 O
ATOM 5 O5' C A 21 -0.704 3.977 -16.878 1.00 66.11 O
ATOM 6 C5' C A 21 -0.351 2.778 -16.194 1.00 65.77 C
ATOM 7 C4' C A 21 -0.442 1.616 -17.162 1.00 65.63 C
ATOM 8 O4' C A 21 0.559 1.794 -18.204 1.00 64.25 O
ATOM 9 C3' C A 21 -0.149 0.251 -16.565 1.00 66.07 C
ATOM 10 O3' C A 21 -1.313 -0.347 -16.012 1.00 67.59 O
ATOM 11 C2' C A 21 0.340 -0.522 -17.791 1.00 64.70 C
ATOM 12 O2' C A 21 -0.706 -1.031 -18.585 1.00 64.71 O
ATOM 13 C1' C A 21 1.135 0.542 -18.538 1.00 62.95 C
ATOM 14 N1 C A 21 2.579 0.460 -18.144 1.00 60.05 N
ATOM 15 C2 C A 21 3.350 -0.584 -18.664 1.00 58.52 C
ATOM 16 O2 C A 21 2.824 -1.379 -19.435 1.00 58.88 O
ATOM 17 N3 C A 21 4.652 -0.699 -18.313 1.00 57.07 N
ATOM 18 C4 C A 21 5.184 0.186 -17.475 1.00 56.76 C
ATOM 19 N4 C A 21 6.468 0.036 -17.165 1.00 55.23 N
ATOM 20 C5 C A 21 4.426 1.261 -16.916 1.00 57.25 C
ATOM 21 C6 C A 21 3.139 1.353 -17.272 1.00 58.64 C
ATOM 22 P U A 22 -1.170 -1.554 -14.965 1.00 69.54 P
ATOM 23 OP1 U A 22 -2.537 -1.906 -14.522 1.00 69.76 O
ATOM 24 OP2 U A 22 -0.162 -1.145 -13.957 1.00 69.65 O
ATOM 25 O5' U A 22 -0.586 -2.783 -15.816 1.00 69.46 O
TER
ATOM 1 O3' A B 70 6.399 7.738 -21.772 1.00 45.21 O
ATOM 2 P U B 71 5.989 7.988 -20.240 1.00 46.60 P
ATOM 3 OP1 U B 71 4.556 7.715 -20.073 1.00 46.40 O
ATOM 4 OP2 U B 71 6.539 9.324 -19.897 1.00 44.55 O
ATOM 5 O5' U B 71 6.729 6.806 -19.466 1.00 46.05 O
ATOM 6 C5' U B 71 7.948 7.018 -18.784 1.00 46.80 C
ATOM 7 C4' U B 71 8.719 5.718 -18.828 1.00 46.85 C
ATOM 8 O4' U B 71 7.897 4.688 -18.219 1.00 47.63 O
ATOM 9 C3' U B 71 8.976 5.202 -20.239 1.00 47.30 C
ATOM 10 O3' U B 71 10.155 5.808 -20.771 1.00 45.84 O
ATOM 11 C2' U B 71 9.118 3.707 -19.967 1.00 47.22 C
ATOM 12 O2' U B 71 10.404 3.348 -19.529 1.00 48.79 O
ATOM 13 C1' U B 71 8.087 3.441 -18.872 1.00 47.72 C
ATOM 14 N1 U B 71 6.803 2.983 -19.495 1.00 48.76 N
ATOM 15 C2 U B 71 6.737 1.735 -20.104 1.00 49.87 C
ATOM 16 O2 U B 71 7.675 0.965 -20.138 1.00 51.78 O
ATOM 17 N3 U B 71 5.530 1.401 -20.682 1.00 49.22 N
ATOM 18 C4 U B 71 4.389 2.189 -20.706 1.00 50.17 C
ATOM 19 O4 U B 71 3.374 1.783 -21.255 1.00 49.93 O
ATOM 20 C5 U B 71 4.526 3.481 -20.064 1.00 50.22 C
ATOM 21 C6 U B 71 5.698 3.820 -19.495 1.00 49.70 C
ATOM 22 P U B 72 10.483 5.903 -22.350 1.00 44.59 P
ATOM 23 OP1 U B 72 11.858 6.405 -22.467 1.00 44.14 O
ATOM 24 OP2 U B 72 9.384 6.623 -23.010 1.00 43.56 O
ATOM 25 O5' U B 72 10.379 4.415 -22.880 1.00 44.16 O
TER
ATOM 2 P C A 21 -2.159 4.624 -16.667 1.00 66.25 P
ATOM 3 OP1 C A 21 -3.169 3.556 -16.555 1.00 65.43 O
ATOM 4 OP2 C A 21 -2.010 5.620 -15.577 1.00 66.83 O
ATOM 5 O5' C A 21 -0.704 3.977 -16.878 1.00 66.11 O
ATOM 6 C5' C A 21 -0.351 2.778 -16.194 1.00 65.77 C
ATOM 7 C4' C A 21 -0.442 1.616 -17.162 1.00 65.63 C
ATOM 8 O4' C A 21 0.559 1.794 -18.204 1.00 64.25 O
ATOM 9 C3' C A 21 -0.149 0.251 -16.565 1.00 66.07 C
ATOM 10 O3' C A 21 -1.313 -0.347 -16.012 1.00 67.59 O
ATOM 11 C2' C A 21 0.340 -0.522 -17.791 1.00 64.70 C
ATOM 12 O2' C A 21 -0.706 -1.031 -18.585 1.00 64.71 O
ATOM 13 C1' C A 21 1.135 0.542 -18.538 1.00 62.95 C
ATOM 14 N1 C A 21 2.579 0.460 -18.144 1.00 60.05 N
ATOM 15 C2 C A 21 3.350 -0.584 -18.664 1.00 58.52 C
ATOM 16 O2 C A 21 2.824 -1.379 -19.435 1.00 58.88 O
ATOM 17 N3 C A 21 4.652 -0.699 -18.313 1.00 57.07 N
ATOM 18 C4 C A 21 5.184 0.186 -17.475 1.00 56.76 C
ATOM 19 N4 C A 21 6.468 0.036 -17.165 1.00 55.23 N
ATOM 20 C5 C A 21 4.426 1.261 -16.916 1.00 57.25 C
ATOM 21 C6 C A 21 3.139 1.353 -17.272 1.00 58.64 C
ATOM 22 P U A 22 -1.170 -1.554 -14.965 1.00 69.54 P
ATOM 23 OP1 U A 22 -2.537 -1.906 -14.522 1.00 69.76 O
ATOM 24 OP2 U A 22 -0.162 -1.145 -13.957 1.00 69.65 O
ATOM 25 O5' U A 22 -0.586 -2.783 -15.816 1.00 69.46 O
TER
ATOM 1 O3' A B 70 6.399 7.738 -21.772 1.00 45.21 O
ATOM 2 P U B 71 5.989 7.988 -20.240 1.00 46.60 P
ATOM 3 OP1 U B 71 4.556 7.715 -20.073 1.00 46.40 O
ATOM 4 OP2 U B 71 6.539 9.324 -19.897 1.00 44.55 O
ATOM 5 O5' U B 71 6.729 6.806 -19.466 1.00 46.05 O
ATOM 6 C5' U B 71 7.948 7.018 -18.784 1.00 46.80 C
ATOM 7 C4' U B 71 8.719 5.718 -18.828 1.00 46.85 C
ATOM 8 O4' U B 71 7.897 4.688 -18.219 1.00 47.63 O
ATOM 9 C3' U B 71 8.976 5.202 -20.239 1.00 47.30 C
ATOM 10 O3' U B 71 10.155 5.808 -20.771 1.00 45.84 O
ATOM 11 C2' U B 71 9.118 3.707 -19.967 1.00 47.22 C
ATOM 12 O2' U B 71 10.404 3.348 -19.529 1.00 48.79 O
ATOM 13 C1' U B 71 8.087 3.441 -18.872 1.00 47.72 C
ATOM 14 N1 U B 71 6.803 2.983 -19.495 1.00 48.76 N
ATOM 15 C2 U B 71 6.737 1.735 -20.104 1.00 49.87 C
ATOM 16 O2 U B 71 7.675 0.965 -20.138 1.00 51.78 O
ATOM 17 N3 U B 71 5.530 1.401 -20.682 1.00 49.22 N
ATOM 18 C4 U B 71 4.389 2.189 -20.706 1.00 50.17 C
ATOM 19 O4 U B 71 3.374 1.783 -21.255 1.00 49.93 O
ATOM 20 C5 U B 71 4.526 3.481 -20.064 1.00 50.22 C
ATOM 21 C6 U B 71 5.698 3.820 -19.495 1.00 49.70 C
ATOM 22 P U B 72 10.483 5.903 -22.350 1.00 44.59 P
ATOM 23 OP1 U B 72 11.858 6.405 -22.467 1.00 44.14 O
ATOM 24 OP2 U B 72 9.384 6.623 -23.010 1.00 43.56 O
ATOM 25 O5' U B 72 10.379 4.415 -22.880 1.00 44.16 O
TER
Atoms:
C2: (3.350,-0.584,-18.664)
OP1: (-3.169,3.556,-16.555)
OP2: (-2.010,5.620,-15.577)
C4: (5.184,0.186,-17.475)
O5': (-0.704,3.977,-16.878)
C3': (-0.149,0.251,-16.565)
C1': (1.135,0.542,-18.538)
O4': (0.559,1.794,-18.204)
C5': (-0.351,2.778,-16.194)
P: (-2.159,4.624,-16.667)
O2: (2.824,-1.379,-19.435)
C4': (-0.442,1.616,-17.162)
C2': (0.340,-0.522,-17.791)
O2': (-0.706,-1.031,-18.585)
N1: (2.579,0.460,-18.144)
N3: (4.652,-0.699,-18.313)
N4: (6.468,0.036,-17.165)
C6: (3.139,1.353,-17.272)
C5: (4.426,1.261,-16.916)
O3': (-1.313,-0.347,-16.012)
OP1: (-3.169,3.556,-16.555)
OP2: (-2.010,5.620,-15.577)
C4: (5.184,0.186,-17.475)
O5': (-0.704,3.977,-16.878)
C3': (-0.149,0.251,-16.565)
C1': (1.135,0.542,-18.538)
O4': (0.559,1.794,-18.204)
C5': (-0.351,2.778,-16.194)
P: (-2.159,4.624,-16.667)
O2: (2.824,-1.379,-19.435)
C4': (-0.442,1.616,-17.162)
C2': (0.340,-0.522,-17.791)
O2': (-0.706,-1.031,-18.585)
N1: (2.579,0.460,-18.144)
N3: (4.652,-0.699,-18.313)
N4: (6.468,0.036,-17.165)
C6: (3.139,1.353,-17.272)
C5: (4.426,1.261,-16.916)
O3': (-1.313,-0.347,-16.012)
C4: (4.389,2.189,-20.706)
N3: (5.530,1.401,-20.682)
OP1: (4.556,7.715,-20.073)
OP2: (6.539,9.324,-19.897)
C2: (6.737,1.735,-20.104)
C1': (8.087,3.441,-18.872)
C3': (8.976,5.202,-20.239)
O5': (6.729,6.806,-19.466)
O4': (7.897,4.688,-18.219)
C5': (7.948,7.018,-18.784)
P: (5.989,7.988,-20.240)
C4': (8.719,5.718,-18.828)
C2': (9.118,3.707,-19.967)
O2': (10.404,3.348,-19.529)
N1: (6.803,2.983,-19.495)
O4: (3.374,1.783,-21.255)
O2: (7.675,0.965,-20.138)
C6: (5.698,3.820,-19.495)
C5: (4.526,3.481,-20.064)
O3': (10.155,5.808,-20.771)
N3: (5.530,1.401,-20.682)
OP1: (4.556,7.715,-20.073)
OP2: (6.539,9.324,-19.897)
C2: (6.737,1.735,-20.104)
C1': (8.087,3.441,-18.872)
C3': (8.976,5.202,-20.239)
O5': (6.729,6.806,-19.466)
O4': (7.897,4.688,-18.219)
C5': (7.948,7.018,-18.784)
P: (5.989,7.988,-20.240)
C4': (8.719,5.718,-18.828)
C2': (9.118,3.707,-19.967)
O2': (10.404,3.348,-19.529)
N1: (6.803,2.983,-19.495)
O4: (3.374,1.783,-21.255)
O2: (7.675,0.965,-20.138)
C6: (5.698,3.820,-19.495)
C5: (4.526,3.481,-20.064)
O3': (10.155,5.808,-20.771)
Image (generated by PyMOL):