Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21228:21229
Extra
PDB:
ATOM 1 O3' G A1227 -58.402 -45.605 7.002 1.00107.04 O
ATOM 2 P C A1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 3 OP1 C A1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 4 OP2 C A1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 5 O5' C A1228 -57.902 -44.152 8.980 1.00 86.90 O
ATOM 6 C5' C A1228 -57.960 -43.662 10.322 1.00 86.37 C
ATOM 7 C4' C A1228 -56.611 -43.201 10.810 1.00 85.92 C
ATOM 8 O4' C A1228 -55.913 -44.300 11.448 1.00 85.58 O
ATOM 9 C3' C A1228 -55.649 -42.726 9.734 1.00 86.17 C
ATOM 10 O3' C A1228 -55.891 -41.390 9.327 1.00 86.36 O
ATOM 11 C2' C A1228 -54.271 -42.944 10.369 1.00 85.69 C
ATOM 12 O2' C A1228 -53.943 -41.881 11.236 1.00 85.28 O
ATOM 13 C1' C A1228 -54.513 -44.182 11.221 1.00 85.43 C
ATOM 14 N1 C A1228 -53.997 -45.428 10.592 1.00 85.63 N
ATOM 15 C2 C A1228 -54.818 -46.212 9.773 1.00 86.10 C
ATOM 16 O2 C A1228 -55.959 -45.871 9.530 1.00 86.37 O
ATOM 17 N3 C A1228 -54.391 -47.353 9.223 1.00 86.30 N
ATOM 18 C4 C A1228 -53.163 -47.756 9.459 1.00 86.05 C
ATOM 19 N4 C A1228 -52.848 -48.911 8.856 1.00 86.29 N
ATOM 20 C5 C A1228 -52.266 -46.997 10.296 1.00 85.57 C
ATOM 21 C6 C A1228 -52.719 -45.850 10.842 1.00 85.37 C
ATOM 22 P U A1229 -55.810 -40.994 7.771 1.00106.56 P
ATOM 23 OP1 U A1229 -56.220 -39.568 7.665 1.00106.70 O
ATOM 24 OP2 U A1229 -56.575 -42.022 7.015 1.00107.02 O
ATOM 25 O5' U A1229 -54.263 -41.134 7.448 1.00106.44 O
TER
ATOM 1 O3' C B1228 -55.891 -41.390 9.327 1.00 86.36 O
ATOM 2 P U B1229 -55.810 -40.994 7.771 1.00106.56 P
ATOM 3 OP1 U B1229 -56.220 -39.568 7.665 1.00106.70 O
ATOM 4 OP2 U B1229 -56.575 -42.022 7.015 1.00107.02 O
ATOM 5 O5' U B1229 -54.263 -41.134 7.448 1.00106.44 O
ATOM 6 C5' U B1229 -53.313 -40.257 8.034 1.00106.04 C
ATOM 7 C4' U B1229 -51.914 -40.757 7.815 1.00105.93 C
ATOM 8 O4' U B1229 -51.759 -42.051 8.452 1.00105.65 O
ATOM 9 C3' U B1229 -51.526 -40.996 6.364 1.00106.50 C
ATOM 10 O3' U B1229 -51.076 -39.817 5.723 1.00106.73 O
ATOM 11 C2' U B1229 -50.463 -42.080 6.462 1.00106.32 C
ATOM 12 O2' U B1229 -49.200 -41.517 6.780 1.00106.04 O
ATOM 13 C1' U B1229 -50.954 -42.893 7.660 1.00105.88 C
ATOM 14 N1 U B1229 -51.763 -44.068 7.239 1.00106.18 N
ATOM 15 C2 U B1229 -51.064 -45.209 6.876 1.00106.27 C
ATOM 16 O2 U B1229 -49.843 -45.276 6.902 1.00106.12 O
ATOM 17 N3 U B1229 -51.841 -46.268 6.487 1.00106.56 N
ATOM 18 C4 U B1229 -53.211 -46.310 6.411 1.00106.77 C
ATOM 19 O4 U B1229 -53.742 -47.352 6.035 1.00107.03 O
ATOM 20 C5 U B1229 -53.880 -45.102 6.795 1.00106.68 C
ATOM 21 C6 U B1229 -53.151 -44.051 7.190 1.00106.39 C
ATOM 22 P C B1230 -51.389 -39.563 4.170 1.00110.14 P
ATOM 23 OP1 C B1230 -50.923 -38.188 3.851 1.00110.26 O
ATOM 24 OP2 C B1230 -52.812 -39.904 3.953 1.00110.44 O
ATOM 25 O5' C B1230 -50.462 -40.634 3.447 1.00110.34 O
TER
ATOM 2 P C A1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 3 OP1 C A1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 4 OP2 C A1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 5 O5' C A1228 -57.902 -44.152 8.980 1.00 86.90 O
ATOM 6 C5' C A1228 -57.960 -43.662 10.322 1.00 86.37 C
ATOM 7 C4' C A1228 -56.611 -43.201 10.810 1.00 85.92 C
ATOM 8 O4' C A1228 -55.913 -44.300 11.448 1.00 85.58 O
ATOM 9 C3' C A1228 -55.649 -42.726 9.734 1.00 86.17 C
ATOM 10 O3' C A1228 -55.891 -41.390 9.327 1.00 86.36 O
ATOM 11 C2' C A1228 -54.271 -42.944 10.369 1.00 85.69 C
ATOM 12 O2' C A1228 -53.943 -41.881 11.236 1.00 85.28 O
ATOM 13 C1' C A1228 -54.513 -44.182 11.221 1.00 85.43 C
ATOM 14 N1 C A1228 -53.997 -45.428 10.592 1.00 85.63 N
ATOM 15 C2 C A1228 -54.818 -46.212 9.773 1.00 86.10 C
ATOM 16 O2 C A1228 -55.959 -45.871 9.530 1.00 86.37 O
ATOM 17 N3 C A1228 -54.391 -47.353 9.223 1.00 86.30 N
ATOM 18 C4 C A1228 -53.163 -47.756 9.459 1.00 86.05 C
ATOM 19 N4 C A1228 -52.848 -48.911 8.856 1.00 86.29 N
ATOM 20 C5 C A1228 -52.266 -46.997 10.296 1.00 85.57 C
ATOM 21 C6 C A1228 -52.719 -45.850 10.842 1.00 85.37 C
ATOM 22 P U A1229 -55.810 -40.994 7.771 1.00106.56 P
ATOM 23 OP1 U A1229 -56.220 -39.568 7.665 1.00106.70 O
ATOM 24 OP2 U A1229 -56.575 -42.022 7.015 1.00107.02 O
ATOM 25 O5' U A1229 -54.263 -41.134 7.448 1.00106.44 O
TER
ATOM 1 O3' C B1228 -55.891 -41.390 9.327 1.00 86.36 O
ATOM 2 P U B1229 -55.810 -40.994 7.771 1.00106.56 P
ATOM 3 OP1 U B1229 -56.220 -39.568 7.665 1.00106.70 O
ATOM 4 OP2 U B1229 -56.575 -42.022 7.015 1.00107.02 O
ATOM 5 O5' U B1229 -54.263 -41.134 7.448 1.00106.44 O
ATOM 6 C5' U B1229 -53.313 -40.257 8.034 1.00106.04 C
ATOM 7 C4' U B1229 -51.914 -40.757 7.815 1.00105.93 C
ATOM 8 O4' U B1229 -51.759 -42.051 8.452 1.00105.65 O
ATOM 9 C3' U B1229 -51.526 -40.996 6.364 1.00106.50 C
ATOM 10 O3' U B1229 -51.076 -39.817 5.723 1.00106.73 O
ATOM 11 C2' U B1229 -50.463 -42.080 6.462 1.00106.32 C
ATOM 12 O2' U B1229 -49.200 -41.517 6.780 1.00106.04 O
ATOM 13 C1' U B1229 -50.954 -42.893 7.660 1.00105.88 C
ATOM 14 N1 U B1229 -51.763 -44.068 7.239 1.00106.18 N
ATOM 15 C2 U B1229 -51.064 -45.209 6.876 1.00106.27 C
ATOM 16 O2 U B1229 -49.843 -45.276 6.902 1.00106.12 O
ATOM 17 N3 U B1229 -51.841 -46.268 6.487 1.00106.56 N
ATOM 18 C4 U B1229 -53.211 -46.310 6.411 1.00106.77 C
ATOM 19 O4 U B1229 -53.742 -47.352 6.035 1.00107.03 O
ATOM 20 C5 U B1229 -53.880 -45.102 6.795 1.00106.68 C
ATOM 21 C6 U B1229 -53.151 -44.051 7.190 1.00106.39 C
ATOM 22 P C B1230 -51.389 -39.563 4.170 1.00110.14 P
ATOM 23 OP1 C B1230 -50.923 -38.188 3.851 1.00110.26 O
ATOM 24 OP2 C B1230 -52.812 -39.904 3.953 1.00110.44 O
ATOM 25 O5' C B1230 -50.462 -40.634 3.447 1.00110.34 O
TER
Atoms:
C2: (-54.818,-46.212,9.773)
OP1: (-59.007,-46.418,9.261)
OP2: (-60.283,-44.499,8.161)
C4: (-53.163,-47.756,9.459)
O5': (-57.902,-44.152,8.980)
C3': (-55.649,-42.726,9.734)
C1': (-54.513,-44.182,11.221)
O4': (-55.913,-44.300,11.448)
C5': (-57.960,-43.662,10.322)
P: (-58.993,-45.193,8.424)
O2: (-55.959,-45.871,9.530)
C4': (-56.611,-43.201,10.810)
C2': (-54.271,-42.944,10.369)
O2': (-53.943,-41.881,11.236)
N1: (-53.997,-45.428,10.592)
N3: (-54.391,-47.353,9.223)
N4: (-52.848,-48.911,8.856)
C6: (-52.719,-45.850,10.842)
C5: (-52.266,-46.997,10.296)
O3': (-55.891,-41.390,9.327)
OP1: (-59.007,-46.418,9.261)
OP2: (-60.283,-44.499,8.161)
C4: (-53.163,-47.756,9.459)
O5': (-57.902,-44.152,8.980)
C3': (-55.649,-42.726,9.734)
C1': (-54.513,-44.182,11.221)
O4': (-55.913,-44.300,11.448)
C5': (-57.960,-43.662,10.322)
P: (-58.993,-45.193,8.424)
O2: (-55.959,-45.871,9.530)
C4': (-56.611,-43.201,10.810)
C2': (-54.271,-42.944,10.369)
O2': (-53.943,-41.881,11.236)
N1: (-53.997,-45.428,10.592)
N3: (-54.391,-47.353,9.223)
N4: (-52.848,-48.911,8.856)
C6: (-52.719,-45.850,10.842)
C5: (-52.266,-46.997,10.296)
O3': (-55.891,-41.390,9.327)
C4: (-53.211,-46.310,6.411)
N3: (-51.841,-46.268,6.487)
OP1: (-56.220,-39.568,7.665)
OP2: (-56.575,-42.022,7.015)
C2: (-51.064,-45.209,6.876)
C1': (-50.954,-42.893,7.660)
C3': (-51.526,-40.996,6.364)
O5': (-54.263,-41.134,7.448)
O4': (-51.759,-42.051,8.452)
C5': (-53.313,-40.257,8.034)
P: (-55.810,-40.994,7.771)
C4': (-51.914,-40.757,7.815)
C2': (-50.463,-42.080,6.462)
O2': (-49.200,-41.517,6.780)
N1: (-51.763,-44.068,7.239)
O4: (-53.742,-47.352,6.035)
O2: (-49.843,-45.276,6.902)
C6: (-53.151,-44.051,7.190)
C5: (-53.880,-45.102,6.795)
O3': (-51.076,-39.817,5.723)
N3: (-51.841,-46.268,6.487)
OP1: (-56.220,-39.568,7.665)
OP2: (-56.575,-42.022,7.015)
C2: (-51.064,-45.209,6.876)
C1': (-50.954,-42.893,7.660)
C3': (-51.526,-40.996,6.364)
O5': (-54.263,-41.134,7.448)
O4': (-51.759,-42.051,8.452)
C5': (-53.313,-40.257,8.034)
P: (-55.810,-40.994,7.771)
C4': (-51.914,-40.757,7.815)
C2': (-50.463,-42.080,6.462)
O2': (-49.200,-41.517,6.780)
N1: (-51.763,-44.068,7.239)
O4: (-53.742,-47.352,6.035)
O2: (-49.843,-45.276,6.902)
C6: (-53.151,-44.051,7.190)
C5: (-53.880,-45.102,6.795)
O3': (-51.076,-39.817,5.723)
Image (generated by PyMOL):