Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12064:12065
Extra
PDB:
ATOM 1 O3' A A2063 -40.812 -9.862 52.364 1.00120.30 O
ATOM 2 P C A2064 -40.217 -8.445 51.978 1.00 97.28 P
ATOM 3 OP1 C A2064 -39.956 -7.721 53.264 1.00 97.07 O
ATOM 4 OP2 C A2064 -41.153 -7.842 50.990 1.00 97.43 O
ATOM 5 O5' C A2064 -38.839 -8.830 51.264 1.00 97.24 O
ATOM 6 C5' C A2064 -38.821 -9.349 49.945 1.00 97.41 C
ATOM 7 C4' C A2064 -37.653 -8.820 49.150 1.00 97.35 C
ATOM 8 O4' C A2064 -37.792 -7.387 48.930 1.00 97.29 O
ATOM 9 C3' C A2064 -36.285 -8.948 49.792 1.00 97.15 C
ATOM 10 O3' C A2064 -35.754 -10.263 49.720 1.00 97.20 O
ATOM 11 C2' C A2064 -35.468 -7.897 49.025 1.00 97.08 C
ATOM 12 O2' C A2064 -35.086 -8.380 47.747 1.00 97.21 O
ATOM 13 C1' C A2064 -36.504 -6.792 48.823 1.00 97.13 C
ATOM 14 N1 C A2064 -36.363 -5.703 49.831 1.00 96.94 N
ATOM 15 C2 C A2064 -37.220 -5.575 50.938 1.00 96.90 C
ATOM 16 O2 C A2064 -38.145 -6.361 51.117 1.00 97.03 O
ATOM 17 N3 C A2064 -37.069 -4.577 51.837 1.00 96.73 N
ATOM 18 C4 C A2064 -36.098 -3.697 51.694 1.00 96.59 C
ATOM 19 N4 C A2064 -36.034 -2.748 52.641 1.00 96.43 N
ATOM 20 C5 C A2064 -35.188 -3.789 50.582 1.00 96.62 C
ATOM 21 C6 C A2064 -35.351 -4.792 49.692 1.00 96.80 C
ATOM 22 P U A2065 -34.688 -10.775 50.819 1.00 94.18 P
ATOM 23 OP1 U A2065 -34.121 -12.058 50.319 1.00 94.26 O
ATOM 24 OP2 U A2065 -35.376 -10.771 52.135 1.00 94.11 O
ATOM 25 O5' U A2065 -33.565 -9.640 50.788 1.00 94.00 O
TER
ATOM 1 O3' C B2064 -35.754 -10.263 49.720 1.00 97.20 O
ATOM 2 P U B2065 -34.688 -10.775 50.819 1.00 94.18 P
ATOM 3 OP1 U B2065 -34.121 -12.058 50.319 1.00 94.26 O
ATOM 4 OP2 U B2065 -35.376 -10.771 52.135 1.00 94.11 O
ATOM 5 O5' U B2065 -33.565 -9.640 50.788 1.00 94.00 O
ATOM 6 C5' U B2065 -32.539 -9.644 49.805 1.00 94.00 C
ATOM 7 C4' U B2065 -31.689 -8.406 49.893 1.00 93.82 C
ATOM 8 O4' U B2065 -32.542 -7.233 49.981 1.00 93.82 O
ATOM 9 C3' U B2065 -30.808 -8.301 51.120 1.00 93.60 C
ATOM 10 O3' U B2065 -29.620 -9.051 51.018 1.00 93.55 O
ATOM 11 C2' U B2065 -30.581 -6.803 51.240 1.00 93.47 C
ATOM 12 O2' U B2065 -29.626 -6.358 50.293 1.00 93.45 O
ATOM 13 C1' U B2065 -31.952 -6.268 50.834 1.00 93.61 C
ATOM 14 N1 U B2065 -32.841 -6.062 52.022 1.00 93.56 N
ATOM 15 C2 U B2065 -32.519 -5.077 52.953 1.00 93.37 C
ATOM 16 O2 U B2065 -31.560 -4.338 52.858 1.00 93.24 O
ATOM 17 N3 U B2065 -33.360 -4.959 54.028 1.00 93.33 N
ATOM 18 C4 U B2065 -34.492 -5.699 54.279 1.00 93.46 C
ATOM 19 O4 U B2065 -35.149 -5.461 55.294 1.00 93.41 O
ATOM 20 C5 U B2065 -34.779 -6.700 53.289 1.00 93.66 C
ATOM 21 C6 U B2065 -33.964 -6.843 52.230 1.00 93.70 C
ATOM 22 P A B2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 23 OP1 A B2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 24 OP2 A B2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 25 O5' A B2066 -28.841 -9.086 53.392 1.00 86.97 O
TER
ATOM 2 P C A2064 -40.217 -8.445 51.978 1.00 97.28 P
ATOM 3 OP1 C A2064 -39.956 -7.721 53.264 1.00 97.07 O
ATOM 4 OP2 C A2064 -41.153 -7.842 50.990 1.00 97.43 O
ATOM 5 O5' C A2064 -38.839 -8.830 51.264 1.00 97.24 O
ATOM 6 C5' C A2064 -38.821 -9.349 49.945 1.00 97.41 C
ATOM 7 C4' C A2064 -37.653 -8.820 49.150 1.00 97.35 C
ATOM 8 O4' C A2064 -37.792 -7.387 48.930 1.00 97.29 O
ATOM 9 C3' C A2064 -36.285 -8.948 49.792 1.00 97.15 C
ATOM 10 O3' C A2064 -35.754 -10.263 49.720 1.00 97.20 O
ATOM 11 C2' C A2064 -35.468 -7.897 49.025 1.00 97.08 C
ATOM 12 O2' C A2064 -35.086 -8.380 47.747 1.00 97.21 O
ATOM 13 C1' C A2064 -36.504 -6.792 48.823 1.00 97.13 C
ATOM 14 N1 C A2064 -36.363 -5.703 49.831 1.00 96.94 N
ATOM 15 C2 C A2064 -37.220 -5.575 50.938 1.00 96.90 C
ATOM 16 O2 C A2064 -38.145 -6.361 51.117 1.00 97.03 O
ATOM 17 N3 C A2064 -37.069 -4.577 51.837 1.00 96.73 N
ATOM 18 C4 C A2064 -36.098 -3.697 51.694 1.00 96.59 C
ATOM 19 N4 C A2064 -36.034 -2.748 52.641 1.00 96.43 N
ATOM 20 C5 C A2064 -35.188 -3.789 50.582 1.00 96.62 C
ATOM 21 C6 C A2064 -35.351 -4.792 49.692 1.00 96.80 C
ATOM 22 P U A2065 -34.688 -10.775 50.819 1.00 94.18 P
ATOM 23 OP1 U A2065 -34.121 -12.058 50.319 1.00 94.26 O
ATOM 24 OP2 U A2065 -35.376 -10.771 52.135 1.00 94.11 O
ATOM 25 O5' U A2065 -33.565 -9.640 50.788 1.00 94.00 O
TER
ATOM 1 O3' C B2064 -35.754 -10.263 49.720 1.00 97.20 O
ATOM 2 P U B2065 -34.688 -10.775 50.819 1.00 94.18 P
ATOM 3 OP1 U B2065 -34.121 -12.058 50.319 1.00 94.26 O
ATOM 4 OP2 U B2065 -35.376 -10.771 52.135 1.00 94.11 O
ATOM 5 O5' U B2065 -33.565 -9.640 50.788 1.00 94.00 O
ATOM 6 C5' U B2065 -32.539 -9.644 49.805 1.00 94.00 C
ATOM 7 C4' U B2065 -31.689 -8.406 49.893 1.00 93.82 C
ATOM 8 O4' U B2065 -32.542 -7.233 49.981 1.00 93.82 O
ATOM 9 C3' U B2065 -30.808 -8.301 51.120 1.00 93.60 C
ATOM 10 O3' U B2065 -29.620 -9.051 51.018 1.00 93.55 O
ATOM 11 C2' U B2065 -30.581 -6.803 51.240 1.00 93.47 C
ATOM 12 O2' U B2065 -29.626 -6.358 50.293 1.00 93.45 O
ATOM 13 C1' U B2065 -31.952 -6.268 50.834 1.00 93.61 C
ATOM 14 N1 U B2065 -32.841 -6.062 52.022 1.00 93.56 N
ATOM 15 C2 U B2065 -32.519 -5.077 52.953 1.00 93.37 C
ATOM 16 O2 U B2065 -31.560 -4.338 52.858 1.00 93.24 O
ATOM 17 N3 U B2065 -33.360 -4.959 54.028 1.00 93.33 N
ATOM 18 C4 U B2065 -34.492 -5.699 54.279 1.00 93.46 C
ATOM 19 O4 U B2065 -35.149 -5.461 55.294 1.00 93.41 O
ATOM 20 C5 U B2065 -34.779 -6.700 53.289 1.00 93.66 C
ATOM 21 C6 U B2065 -33.964 -6.843 52.230 1.00 93.70 C
ATOM 22 P A B2066 -29.212 -10.069 52.188 1.00 87.20 P
ATOM 23 OP1 A B2066 -27.994 -10.796 51.732 1.00 87.17 O
ATOM 24 OP2 A B2066 -30.421 -10.855 52.516 1.00 87.33 O
ATOM 25 O5' A B2066 -28.841 -9.086 53.392 1.00 86.97 O
TER
Atoms:
C2: (-37.220,-5.575,50.938)
OP1: (-39.956,-7.721,53.264)
OP2: (-41.153,-7.842,50.990)
C4: (-36.098,-3.697,51.694)
O5': (-38.839,-8.830,51.264)
C3': (-36.285,-8.948,49.792)
C1': (-36.504,-6.792,48.823)
O4': (-37.792,-7.387,48.930)
C5': (-38.821,-9.349,49.945)
P: (-40.217,-8.445,51.978)
O2: (-38.145,-6.361,51.117)
C4': (-37.653,-8.820,49.150)
C2': (-35.468,-7.897,49.025)
O2': (-35.086,-8.380,47.747)
N1: (-36.363,-5.703,49.831)
N3: (-37.069,-4.577,51.837)
N4: (-36.034,-2.748,52.641)
C6: (-35.351,-4.792,49.692)
C5: (-35.188,-3.789,50.582)
O3': (-35.754,-10.263,49.720)
OP1: (-39.956,-7.721,53.264)
OP2: (-41.153,-7.842,50.990)
C4: (-36.098,-3.697,51.694)
O5': (-38.839,-8.830,51.264)
C3': (-36.285,-8.948,49.792)
C1': (-36.504,-6.792,48.823)
O4': (-37.792,-7.387,48.930)
C5': (-38.821,-9.349,49.945)
P: (-40.217,-8.445,51.978)
O2: (-38.145,-6.361,51.117)
C4': (-37.653,-8.820,49.150)
C2': (-35.468,-7.897,49.025)
O2': (-35.086,-8.380,47.747)
N1: (-36.363,-5.703,49.831)
N3: (-37.069,-4.577,51.837)
N4: (-36.034,-2.748,52.641)
C6: (-35.351,-4.792,49.692)
C5: (-35.188,-3.789,50.582)
O3': (-35.754,-10.263,49.720)
C4: (-34.492,-5.699,54.279)
N3: (-33.360,-4.959,54.028)
OP1: (-34.121,-12.058,50.319)
OP2: (-35.376,-10.771,52.135)
C2: (-32.519,-5.077,52.953)
C1': (-31.952,-6.268,50.834)
C3': (-30.808,-8.301,51.120)
O5': (-33.565,-9.640,50.788)
O4': (-32.542,-7.233,49.981)
C5': (-32.539,-9.644,49.805)
P: (-34.688,-10.775,50.819)
C4': (-31.689,-8.406,49.893)
C2': (-30.581,-6.803,51.240)
O2': (-29.626,-6.358,50.293)
N1: (-32.841,-6.062,52.022)
O4: (-35.149,-5.461,55.294)
O2: (-31.560,-4.338,52.858)
C6: (-33.964,-6.843,52.230)
C5: (-34.779,-6.700,53.289)
O3': (-29.620,-9.051,51.018)
N3: (-33.360,-4.959,54.028)
OP1: (-34.121,-12.058,50.319)
OP2: (-35.376,-10.771,52.135)
C2: (-32.519,-5.077,52.953)
C1': (-31.952,-6.268,50.834)
C3': (-30.808,-8.301,51.120)
O5': (-33.565,-9.640,50.788)
O4': (-32.542,-7.233,49.981)
C5': (-32.539,-9.644,49.805)
P: (-34.688,-10.775,50.819)
C4': (-31.689,-8.406,49.893)
C2': (-30.581,-6.803,51.240)
O2': (-29.626,-6.358,50.293)
N1: (-32.841,-6.062,52.022)
O4: (-35.149,-5.461,55.294)
O2: (-31.560,-4.338,52.858)
C6: (-33.964,-6.843,52.230)
C5: (-34.779,-6.700,53.289)
O3': (-29.620,-9.051,51.018)
Image (generated by PyMOL):