ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0222:0221

Extra

PDB:
ATOM 1 O3' U A 221 49.566 106.915 20.869 1.00 49.54 O
ATOM 2 P A A 222 49.308 107.052 19.292 1.00 51.43 P
ATOM 3 OP1 A A 222 48.305 108.145 19.116 1.00 48.33 O
ATOM 4 OP2 A A 222 49.036 105.704 18.725 1.00 49.67 O
ATOM 5 O5' A A 222 50.725 107.518 18.732 1.00 51.02 O
ATOM 6 C5' A A 222 51.372 108.686 19.265 1.00 51.32 C
ATOM 7 C4' A A 222 52.841 108.680 18.922 1.00 50.77 C
ATOM 8 O4' A A 222 53.532 107.640 19.659 1.00 49.80 O
ATOM 9 C3' A A 222 53.178 108.402 17.473 1.00 51.22 C
ATOM 10 O3' A A 222 53.035 109.563 16.673 1.00 54.82 O
ATOM 11 C2' A A 222 54.614 107.894 17.557 1.00 50.00 C
ATOM 12 O2' A A 222 55.585 108.918 17.668 1.00 49.74 O
ATOM 13 C1' A A 222 54.585 107.116 18.868 1.00 48.17 C
ATOM 14 N9 A A 222 54.328 105.700 18.631 1.00 46.88 N
ATOM 15 C8 A A 222 53.114 105.071 18.494 1.00 46.36 C
ATOM 16 N7 A A 222 53.213 103.786 18.261 1.00 47.28 N
ATOM 17 C5 A A 222 54.582 103.553 18.248 1.00 44.78 C
ATOM 18 C6 A A 222 55.337 102.393 18.044 1.00 44.03 C
ATOM 19 N6 A A 222 54.799 101.201 17.797 1.00 46.57 N
ATOM 20 N1 A A 222 56.681 102.496 18.097 1.00 44.51 N
ATOM 21 C2 A A 222 57.219 103.695 18.334 1.00 45.19 C
ATOM 22 N3 A A 222 56.613 104.862 18.536 1.00 46.23 N
ATOM 23 C4 A A 222 55.279 104.720 18.480 1.00 45.30 C
ATOM 24 P C A 223 53.162 109.440 15.078 1.00 58.34 P
ATOM 25 OP1 C A 223 52.972 110.816 14.538 1.00 59.57 O
ATOM 26 OP2 C A 223 52.312 108.325 14.572 1.00 55.81 O
ATOM 27 O5' C A 223 54.684 109.027 14.895 1.00 56.23 O
TER

ATOM 1 O3' A B 220 48.165 101.141 22.027 1.00 46.38 O
ATOM 2 P U B 221 48.394 101.886 20.627 1.00 48.66 P
ATOM 3 OP1 U B 221 47.052 102.288 20.149 1.00 47.92 O
ATOM 4 OP2 U B 221 49.276 101.051 19.759 1.00 44.62 O
ATOM 5 O5' U B 221 49.183 103.203 21.044 1.00 48.45 O
ATOM 6 C5' U B 221 48.598 104.120 21.980 1.00 48.95 C
ATOM 7 C4' U B 221 49.616 105.119 22.447 1.00 49.04 C
ATOM 8 O4' U B 221 50.659 104.463 23.209 1.00 50.26 O
ATOM 9 C3' U B 221 50.355 105.848 21.348 1.00 48.94 C
ATOM 10 O3' U B 221 49.566 106.915 20.869 1.00 49.54 O
ATOM 11 C2' U B 221 51.625 106.305 22.053 1.00 49.45 C
ATOM 12 O2' U B 221 51.410 107.468 22.823 1.00 51.11 O
ATOM 13 C1' U B 221 51.889 105.136 23.003 1.00 49.42 C
ATOM 14 N1 U B 221 52.862 104.170 22.475 1.00 48.66 N
ATOM 15 C2 U B 221 54.190 104.343 22.807 1.00 48.66 C
ATOM 16 O2 U B 221 54.589 105.266 23.492 1.00 51.37 O
ATOM 17 N3 U B 221 55.037 103.394 22.302 1.00 47.92 N
ATOM 18 C4 U B 221 54.698 102.321 21.511 1.00 47.68 C
ATOM 19 O4 U B 221 55.575 101.541 21.139 1.00 49.83 O
ATOM 20 C5 U B 221 53.314 102.223 21.202 1.00 45.88 C
ATOM 21 C6 U B 221 52.465 103.125 21.681 1.00 47.32 C
ATOM 22 P A B 222 49.308 107.052 19.292 1.00 51.43 P
ATOM 23 OP1 A B 222 48.305 108.145 19.116 1.00 48.33 O
ATOM 24 OP2 A B 222 49.036 105.704 18.725 1.00 49.67 O
ATOM 25 O5' A B 222 50.725 107.518 18.732 1.00 51.02 O
TER

Atoms:
OP1: (48.305,108.145,19.116)
OP2: (49.036,105.704,18.725)
C3': (53.178,108.402,17.473)
C1': (54.585,107.116,18.868)
C5': (51.372,108.686,19.265)
O4': (53.532,107.640,19.659)
C8: (53.114,105.071,18.494)
O2': (55.585,108.918,17.668)
C6: (55.337,102.393,18.044)
C5: (54.582,103.553,18.248)
C4: (55.279,104.720,18.480)
P: (49.308,107.052,19.292)
C4': (52.841,108.680,18.922)
C2': (54.614,107.894,17.557)
C2: (57.219,103.695,18.334)
N1: (56.681,102.496,18.097)
N3: (56.613,104.862,18.536)
N6: (54.799,101.201,17.797)
N7: (53.213,103.786,18.261)
N9: (54.328,105.700,18.631)
O5': (50.725,107.518,18.732)
O3': (53.035,109.563,16.673)
C4: (54.698,102.321,21.511)
N3: (55.037,103.394,22.302)
OP1: (47.052,102.288,20.149)
OP2: (49.276,101.051,19.759)
C2: (54.190,104.343,22.807)
C1': (51.889,105.136,23.003)
C3': (50.355,105.848,21.348)
O5': (49.183,103.203,21.044)
O4': (50.659,104.463,23.209)
C5': (48.598,104.120,21.980)
P: (48.394,101.886,20.627)
C4': (49.616,105.119,22.447)
C2': (51.625,106.305,22.053)
O2': (51.410,107.468,22.823)
N1: (52.862,104.170,22.475)
O4: (55.575,101.541,21.139)
O2: (54.589,105.266,23.492)
C6: (52.465,103.125,21.681)
C5: (53.314,102.223,21.202)
O3': (49.566,106.915,20.869)
Image (generated by PyMOL):
PyMOL image
show in jmol