Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11376:1887
Extra
PDB:
ATOM 1 O3' G A1375 71.615 -3.460 71.918 1.00 30.24 O
ATOM 2 P C A1376 70.987 -2.022 72.135 1.00 34.53 P
ATOM 3 OP1 C A1376 71.910 -1.068 71.426 1.00 34.65 O
ATOM 4 OP2 C A1376 70.747 -1.854 73.592 1.00 34.61 O
ATOM 5 O5' C A1376 69.592 -2.115 71.369 1.00 34.30 O
ATOM 6 C5' C A1376 69.508 -1.981 69.959 1.00 34.22 C
ATOM 7 C4' C A1376 68.088 -1.748 69.500 1.00 34.03 C
ATOM 8 O4' C A1376 67.200 -2.689 70.173 1.00 33.93 O
ATOM 9 C3' C A1376 67.512 -0.364 69.795 1.00 34.04 C
ATOM 10 O3' C A1376 66.515 -0.040 68.816 1.00 33.90 O
ATOM 11 C2' C A1376 66.812 -0.611 71.127 1.00 34.02 C
ATOM 12 O2' C A1376 65.819 0.305 71.438 1.00 33.97 O
ATOM 13 C1' C A1376 66.218 -1.970 70.897 1.00 33.89 C
ATOM 14 N1 C A1376 65.913 -2.705 72.138 1.00 33.90 N
ATOM 15 C2 C A1376 64.648 -3.202 72.356 1.00 33.76 C
ATOM 16 O2 C A1376 63.819 -3.014 71.523 1.00 33.64 O
ATOM 17 N3 C A1376 64.317 -3.883 73.430 1.00 33.78 N
ATOM 18 C4 C A1376 65.235 -4.111 74.353 1.00 33.94 C
ATOM 19 N4 C A1376 64.911 -4.816 75.444 1.00 33.97 N
ATOM 20 C5 C A1376 66.549 -3.627 74.178 1.00 34.08 C
ATOM 21 C6 C A1376 66.848 -2.952 73.071 1.00 34.06 C
ATOM 22 P A A1377 66.895 0.466 67.330 1.00 30.58 P
ATOM 23 OP1 A A1377 66.327 -0.486 66.355 1.00 30.45 O
ATOM 24 OP2 A A1377 68.326 0.740 67.314 1.00 30.76 O
ATOM 25 O5' A A1377 66.083 1.813 67.217 1.00 30.57 O
TER
ATOM 1 O3' U B 886 63.090 -7.951 69.758 1.00 30.44 O
ATOM 2 P U B 887 63.760 -8.290 68.344 1.00 29.94 P
ATOM 3 OP1 U B 887 62.697 -8.084 67.297 1.00 29.81 O
ATOM 4 OP2 U B 887 64.406 -9.622 68.478 1.00 30.02 O
ATOM 5 O5' U B 887 64.878 -7.220 68.177 1.00 30.04 O
ATOM 6 C5' U B 887 64.675 -5.880 68.514 1.00 30.04 C
ATOM 7 C4' U B 887 65.941 -5.293 69.038 1.00 30.21 C
ATOM 8 O4' U B 887 65.892 -5.337 70.484 1.00 30.27 O
ATOM 9 C3' U B 887 67.187 -6.069 68.625 1.00 30.32 C
ATOM 10 O3' U B 887 68.262 -5.176 68.404 1.00 30.44 O
ATOM 11 C2' U B 887 67.462 -6.923 69.848 1.00 30.40 C
ATOM 12 O2' U B 887 68.795 -7.288 70.005 1.00 30.56 O
ATOM 13 C1' U B 887 67.011 -6.015 70.968 1.00 30.41 C
ATOM 14 N1 U B 887 66.635 -6.723 72.193 1.00 30.43 N
ATOM 15 C2 U B 887 67.534 -6.775 73.267 1.00 30.60 C
ATOM 16 O2 U B 887 68.609 -6.238 73.242 1.00 30.74 O
ATOM 17 N3 U B 887 67.133 -7.455 74.380 1.00 30.63 N
ATOM 18 C4 U B 887 65.887 -8.047 74.493 1.00 30.50 C
ATOM 19 O4 U B 887 65.558 -8.643 75.519 1.00 30.54 O
ATOM 20 C5 U B 887 65.042 -7.933 73.361 1.00 30.32 C
ATOM 21 C6 U B 887 65.426 -7.282 72.276 1.00 30.30 C
ATOM 22 P C B 888 68.818 -4.936 66.911 1.00 29.48 P
ATOM 23 OP1 C B 888 69.937 -4.021 67.023 1.00 29.63 O
ATOM 24 OP2 C B 888 67.703 -4.552 66.062 1.00 29.33 O
ATOM 25 O5' C B 888 69.324 -6.377 66.465 1.00 29.51 O
TER
ATOM 2 P C A1376 70.987 -2.022 72.135 1.00 34.53 P
ATOM 3 OP1 C A1376 71.910 -1.068 71.426 1.00 34.65 O
ATOM 4 OP2 C A1376 70.747 -1.854 73.592 1.00 34.61 O
ATOM 5 O5' C A1376 69.592 -2.115 71.369 1.00 34.30 O
ATOM 6 C5' C A1376 69.508 -1.981 69.959 1.00 34.22 C
ATOM 7 C4' C A1376 68.088 -1.748 69.500 1.00 34.03 C
ATOM 8 O4' C A1376 67.200 -2.689 70.173 1.00 33.93 O
ATOM 9 C3' C A1376 67.512 -0.364 69.795 1.00 34.04 C
ATOM 10 O3' C A1376 66.515 -0.040 68.816 1.00 33.90 O
ATOM 11 C2' C A1376 66.812 -0.611 71.127 1.00 34.02 C
ATOM 12 O2' C A1376 65.819 0.305 71.438 1.00 33.97 O
ATOM 13 C1' C A1376 66.218 -1.970 70.897 1.00 33.89 C
ATOM 14 N1 C A1376 65.913 -2.705 72.138 1.00 33.90 N
ATOM 15 C2 C A1376 64.648 -3.202 72.356 1.00 33.76 C
ATOM 16 O2 C A1376 63.819 -3.014 71.523 1.00 33.64 O
ATOM 17 N3 C A1376 64.317 -3.883 73.430 1.00 33.78 N
ATOM 18 C4 C A1376 65.235 -4.111 74.353 1.00 33.94 C
ATOM 19 N4 C A1376 64.911 -4.816 75.444 1.00 33.97 N
ATOM 20 C5 C A1376 66.549 -3.627 74.178 1.00 34.08 C
ATOM 21 C6 C A1376 66.848 -2.952 73.071 1.00 34.06 C
ATOM 22 P A A1377 66.895 0.466 67.330 1.00 30.58 P
ATOM 23 OP1 A A1377 66.327 -0.486 66.355 1.00 30.45 O
ATOM 24 OP2 A A1377 68.326 0.740 67.314 1.00 30.76 O
ATOM 25 O5' A A1377 66.083 1.813 67.217 1.00 30.57 O
TER
ATOM 1 O3' U B 886 63.090 -7.951 69.758 1.00 30.44 O
ATOM 2 P U B 887 63.760 -8.290 68.344 1.00 29.94 P
ATOM 3 OP1 U B 887 62.697 -8.084 67.297 1.00 29.81 O
ATOM 4 OP2 U B 887 64.406 -9.622 68.478 1.00 30.02 O
ATOM 5 O5' U B 887 64.878 -7.220 68.177 1.00 30.04 O
ATOM 6 C5' U B 887 64.675 -5.880 68.514 1.00 30.04 C
ATOM 7 C4' U B 887 65.941 -5.293 69.038 1.00 30.21 C
ATOM 8 O4' U B 887 65.892 -5.337 70.484 1.00 30.27 O
ATOM 9 C3' U B 887 67.187 -6.069 68.625 1.00 30.32 C
ATOM 10 O3' U B 887 68.262 -5.176 68.404 1.00 30.44 O
ATOM 11 C2' U B 887 67.462 -6.923 69.848 1.00 30.40 C
ATOM 12 O2' U B 887 68.795 -7.288 70.005 1.00 30.56 O
ATOM 13 C1' U B 887 67.011 -6.015 70.968 1.00 30.41 C
ATOM 14 N1 U B 887 66.635 -6.723 72.193 1.00 30.43 N
ATOM 15 C2 U B 887 67.534 -6.775 73.267 1.00 30.60 C
ATOM 16 O2 U B 887 68.609 -6.238 73.242 1.00 30.74 O
ATOM 17 N3 U B 887 67.133 -7.455 74.380 1.00 30.63 N
ATOM 18 C4 U B 887 65.887 -8.047 74.493 1.00 30.50 C
ATOM 19 O4 U B 887 65.558 -8.643 75.519 1.00 30.54 O
ATOM 20 C5 U B 887 65.042 -7.933 73.361 1.00 30.32 C
ATOM 21 C6 U B 887 65.426 -7.282 72.276 1.00 30.30 C
ATOM 22 P C B 888 68.818 -4.936 66.911 1.00 29.48 P
ATOM 23 OP1 C B 888 69.937 -4.021 67.023 1.00 29.63 O
ATOM 24 OP2 C B 888 67.703 -4.552 66.062 1.00 29.33 O
ATOM 25 O5' C B 888 69.324 -6.377 66.465 1.00 29.51 O
TER
Atoms:
C2: (64.648,-3.202,72.356)
OP1: (71.910,-1.068,71.426)
OP2: (70.747,-1.854,73.592)
C4: (65.235,-4.111,74.353)
O5': (69.592,-2.115,71.369)
C3': (67.512,-0.364,69.795)
C1': (66.218,-1.970,70.897)
O4': (67.200,-2.689,70.173)
C5': (69.508,-1.981,69.959)
P: (70.987,-2.022,72.135)
O2: (63.819,-3.014,71.523)
C4': (68.088,-1.748,69.500)
C2': (66.812,-0.611,71.127)
O2': (65.819,0.305,71.438)
N1: (65.913,-2.705,72.138)
N3: (64.317,-3.883,73.430)
N4: (64.911,-4.816,75.444)
C6: (66.848,-2.952,73.071)
C5: (66.549,-3.627,74.178)
O3': (66.515,-0.040,68.816)
OP1: (71.910,-1.068,71.426)
OP2: (70.747,-1.854,73.592)
C4: (65.235,-4.111,74.353)
O5': (69.592,-2.115,71.369)
C3': (67.512,-0.364,69.795)
C1': (66.218,-1.970,70.897)
O4': (67.200,-2.689,70.173)
C5': (69.508,-1.981,69.959)
P: (70.987,-2.022,72.135)
O2: (63.819,-3.014,71.523)
C4': (68.088,-1.748,69.500)
C2': (66.812,-0.611,71.127)
O2': (65.819,0.305,71.438)
N1: (65.913,-2.705,72.138)
N3: (64.317,-3.883,73.430)
N4: (64.911,-4.816,75.444)
C6: (66.848,-2.952,73.071)
C5: (66.549,-3.627,74.178)
O3': (66.515,-0.040,68.816)
C4: (65.887,-8.047,74.493)
N3: (67.133,-7.455,74.380)
OP1: (62.697,-8.084,67.297)
OP2: (64.406,-9.622,68.478)
C2: (67.534,-6.775,73.267)
C1': (67.011,-6.015,70.968)
C3': (67.187,-6.069,68.625)
O5': (64.878,-7.220,68.177)
O4': (65.892,-5.337,70.484)
C5': (64.675,-5.880,68.514)
P: (63.760,-8.290,68.344)
C4': (65.941,-5.293,69.038)
C2': (67.462,-6.923,69.848)
O2': (68.795,-7.288,70.005)
N1: (66.635,-6.723,72.193)
O4: (65.558,-8.643,75.519)
O2: (68.609,-6.238,73.242)
C6: (65.426,-7.282,72.276)
C5: (65.042,-7.933,73.361)
O3': (68.262,-5.176,68.404)
N3: (67.133,-7.455,74.380)
OP1: (62.697,-8.084,67.297)
OP2: (64.406,-9.622,68.478)
C2: (67.534,-6.775,73.267)
C1': (67.011,-6.015,70.968)
C3': (67.187,-6.069,68.625)
O5': (64.878,-7.220,68.177)
O4': (65.892,-5.337,70.484)
C5': (64.675,-5.880,68.514)
P: (63.760,-8.290,68.344)
C4': (65.941,-5.293,69.038)
C2': (67.462,-6.923,69.848)
O2': (68.795,-7.288,70.005)
N1: (66.635,-6.723,72.193)
O4: (65.558,-8.643,75.519)
O2: (68.609,-6.238,73.242)
C6: (65.426,-7.282,72.276)
C5: (65.042,-7.933,73.361)
O3': (68.262,-5.176,68.404)
Image (generated by PyMOL):