Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1960:1972
Extra
PDB:
ATOM 1 O3' U A 959 -14.337 -56.457 16.806 1.00157.50 O
ATOM 2 P C A 960 -13.949 -58.019 16.556 1.00188.75 P
ATOM 3 OP1 C A 960 -12.894 -58.369 17.552 1.00188.63 O
ATOM 4 OP2 C A 960 -13.643 -58.171 15.101 1.00188.48 O
ATOM 5 O5' C A 960 -15.287 -58.807 16.905 1.00189.24 O
ATOM 6 C5' C A 960 -16.505 -58.527 16.240 1.00189.45 C
ATOM 7 C4' C A 960 -17.636 -58.422 17.225 1.00189.88 C
ATOM 8 O4' C A 960 -17.890 -59.720 17.819 1.00190.17 O
ATOM 9 C3' C A 960 -17.370 -57.525 18.419 1.00189.88 C
ATOM 10 O3' C A 960 -17.569 -56.152 18.139 1.00189.75 O
ATOM 11 C2' C A 960 -18.309 -58.074 19.484 1.00190.33 C
ATOM 12 O2' C A 960 -19.617 -57.556 19.322 1.00190.62 O
ATOM 13 C1' C A 960 -18.326 -59.562 19.155 1.00190.45 C
ATOM 14 N1 C A 960 -17.446 -60.343 20.047 1.00190.41 N
ATOM 15 C2 C A 960 -17.758 -60.425 21.418 1.00190.69 C
ATOM 16 O2 C A 960 -18.750 -59.839 21.887 1.00190.97 O
ATOM 17 N3 C A 960 -16.957 -61.152 22.226 1.00190.66 N
ATOM 18 C4 C A 960 -15.897 -61.780 21.719 1.00190.37 C
ATOM 19 N4 C A 960 -15.140 -62.485 22.559 1.00190.36 N
ATOM 20 C5 C A 960 -15.560 -61.719 20.335 1.00190.08 C
ATOM 21 C6 C A 960 -16.358 -60.998 19.541 1.00190.12 C
ATOM 22 P C A 961 -17.092 -55.053 19.204 1.00213.13 P
ATOM 23 OP1 C A 961 -17.452 -53.716 18.659 1.00213.02 O
ATOM 24 OP2 C A 961 -15.666 -55.342 19.508 1.00212.81 O
ATOM 25 O5' C A 961 -17.996 -55.389 20.469 1.00213.58 O
TER
ATOM 1 O3' A B 971 -25.108 -58.615 18.521 1.00133.43 O
ATOM 2 P U B 972 -23.952 -57.576 18.945 1.00186.35 P
ATOM 3 OP1 U B 972 -24.165 -57.242 20.371 1.00186.57 O
ATOM 4 OP2 U B 972 -23.955 -56.478 17.946 1.00186.11 O
ATOM 5 O5' U B 972 -22.630 -58.441 18.786 1.00186.06 O
ATOM 6 C5' U B 972 -21.877 -58.392 17.584 1.00185.68 C
ATOM 7 C4' U B 972 -21.719 -59.755 16.961 1.00185.69 C
ATOM 8 O4' U B 972 -20.813 -60.555 17.758 1.00185.64 O
ATOM 9 C3' U B 972 -23.002 -60.570 16.825 1.00186.12 C
ATOM 10 O3' U B 972 -22.942 -61.321 15.617 1.00186.01 O
ATOM 11 C2' U B 972 -22.928 -61.521 18.016 1.00186.35 C
ATOM 12 O2' U B 972 -23.665 -62.719 17.867 1.00186.66 O
ATOM 13 C1' U B 972 -21.429 -61.782 18.092 1.00185.98 C
ATOM 14 N1 U B 972 -20.959 -62.182 19.427 1.00186.07 N
ATOM 15 C2 U B 972 -19.737 -62.829 19.481 1.00185.82 C
ATOM 16 O2 U B 972 -19.055 -63.055 18.483 1.00185.52 O
ATOM 17 N3 U B 972 -19.353 -63.178 20.760 1.00185.92 N
ATOM 18 C4 U B 972 -20.050 -62.962 21.942 1.00186.25 C
ATOM 19 O4 U B 972 -19.570 -63.341 23.017 1.00186.31 O
ATOM 20 C5 U B 972 -21.308 -62.293 21.781 1.00186.50 C
ATOM 21 C6 U B 972 -21.710 -61.937 20.557 1.00186.41 C
ATOM 22 P G B 973 -23.509 -60.696 14.248 1.00149.07 P
ATOM 23 OP1 G B 973 -24.951 -60.379 14.485 1.00149.47 O
ATOM 24 OP2 G B 973 -23.157 -61.651 13.161 1.00148.93 O
ATOM 25 O5' G B 973 -22.655 -59.343 14.078 1.00148.67 O
TER
ATOM 2 P C A 960 -13.949 -58.019 16.556 1.00188.75 P
ATOM 3 OP1 C A 960 -12.894 -58.369 17.552 1.00188.63 O
ATOM 4 OP2 C A 960 -13.643 -58.171 15.101 1.00188.48 O
ATOM 5 O5' C A 960 -15.287 -58.807 16.905 1.00189.24 O
ATOM 6 C5' C A 960 -16.505 -58.527 16.240 1.00189.45 C
ATOM 7 C4' C A 960 -17.636 -58.422 17.225 1.00189.88 C
ATOM 8 O4' C A 960 -17.890 -59.720 17.819 1.00190.17 O
ATOM 9 C3' C A 960 -17.370 -57.525 18.419 1.00189.88 C
ATOM 10 O3' C A 960 -17.569 -56.152 18.139 1.00189.75 O
ATOM 11 C2' C A 960 -18.309 -58.074 19.484 1.00190.33 C
ATOM 12 O2' C A 960 -19.617 -57.556 19.322 1.00190.62 O
ATOM 13 C1' C A 960 -18.326 -59.562 19.155 1.00190.45 C
ATOM 14 N1 C A 960 -17.446 -60.343 20.047 1.00190.41 N
ATOM 15 C2 C A 960 -17.758 -60.425 21.418 1.00190.69 C
ATOM 16 O2 C A 960 -18.750 -59.839 21.887 1.00190.97 O
ATOM 17 N3 C A 960 -16.957 -61.152 22.226 1.00190.66 N
ATOM 18 C4 C A 960 -15.897 -61.780 21.719 1.00190.37 C
ATOM 19 N4 C A 960 -15.140 -62.485 22.559 1.00190.36 N
ATOM 20 C5 C A 960 -15.560 -61.719 20.335 1.00190.08 C
ATOM 21 C6 C A 960 -16.358 -60.998 19.541 1.00190.12 C
ATOM 22 P C A 961 -17.092 -55.053 19.204 1.00213.13 P
ATOM 23 OP1 C A 961 -17.452 -53.716 18.659 1.00213.02 O
ATOM 24 OP2 C A 961 -15.666 -55.342 19.508 1.00212.81 O
ATOM 25 O5' C A 961 -17.996 -55.389 20.469 1.00213.58 O
TER
ATOM 1 O3' A B 971 -25.108 -58.615 18.521 1.00133.43 O
ATOM 2 P U B 972 -23.952 -57.576 18.945 1.00186.35 P
ATOM 3 OP1 U B 972 -24.165 -57.242 20.371 1.00186.57 O
ATOM 4 OP2 U B 972 -23.955 -56.478 17.946 1.00186.11 O
ATOM 5 O5' U B 972 -22.630 -58.441 18.786 1.00186.06 O
ATOM 6 C5' U B 972 -21.877 -58.392 17.584 1.00185.68 C
ATOM 7 C4' U B 972 -21.719 -59.755 16.961 1.00185.69 C
ATOM 8 O4' U B 972 -20.813 -60.555 17.758 1.00185.64 O
ATOM 9 C3' U B 972 -23.002 -60.570 16.825 1.00186.12 C
ATOM 10 O3' U B 972 -22.942 -61.321 15.617 1.00186.01 O
ATOM 11 C2' U B 972 -22.928 -61.521 18.016 1.00186.35 C
ATOM 12 O2' U B 972 -23.665 -62.719 17.867 1.00186.66 O
ATOM 13 C1' U B 972 -21.429 -61.782 18.092 1.00185.98 C
ATOM 14 N1 U B 972 -20.959 -62.182 19.427 1.00186.07 N
ATOM 15 C2 U B 972 -19.737 -62.829 19.481 1.00185.82 C
ATOM 16 O2 U B 972 -19.055 -63.055 18.483 1.00185.52 O
ATOM 17 N3 U B 972 -19.353 -63.178 20.760 1.00185.92 N
ATOM 18 C4 U B 972 -20.050 -62.962 21.942 1.00186.25 C
ATOM 19 O4 U B 972 -19.570 -63.341 23.017 1.00186.31 O
ATOM 20 C5 U B 972 -21.308 -62.293 21.781 1.00186.50 C
ATOM 21 C6 U B 972 -21.710 -61.937 20.557 1.00186.41 C
ATOM 22 P G B 973 -23.509 -60.696 14.248 1.00149.07 P
ATOM 23 OP1 G B 973 -24.951 -60.379 14.485 1.00149.47 O
ATOM 24 OP2 G B 973 -23.157 -61.651 13.161 1.00148.93 O
ATOM 25 O5' G B 973 -22.655 -59.343 14.078 1.00148.67 O
TER
Atoms:
C2: (-17.758,-60.425,21.418)
OP1: (-12.894,-58.369,17.552)
OP2: (-13.643,-58.171,15.101)
C4: (-15.897,-61.780,21.719)
O5': (-15.287,-58.807,16.905)
C3': (-17.370,-57.525,18.419)
C1': (-18.326,-59.562,19.155)
O4': (-17.890,-59.720,17.819)
C5': (-16.505,-58.527,16.240)
P: (-13.949,-58.019,16.556)
O2: (-18.750,-59.839,21.887)
C4': (-17.636,-58.422,17.225)
C2': (-18.309,-58.074,19.484)
O2': (-19.617,-57.556,19.322)
N1: (-17.446,-60.343,20.047)
N3: (-16.957,-61.152,22.226)
N4: (-15.140,-62.485,22.559)
C6: (-16.358,-60.998,19.541)
C5: (-15.560,-61.719,20.335)
O3': (-17.569,-56.152,18.139)
OP1: (-12.894,-58.369,17.552)
OP2: (-13.643,-58.171,15.101)
C4: (-15.897,-61.780,21.719)
O5': (-15.287,-58.807,16.905)
C3': (-17.370,-57.525,18.419)
C1': (-18.326,-59.562,19.155)
O4': (-17.890,-59.720,17.819)
C5': (-16.505,-58.527,16.240)
P: (-13.949,-58.019,16.556)
O2: (-18.750,-59.839,21.887)
C4': (-17.636,-58.422,17.225)
C2': (-18.309,-58.074,19.484)
O2': (-19.617,-57.556,19.322)
N1: (-17.446,-60.343,20.047)
N3: (-16.957,-61.152,22.226)
N4: (-15.140,-62.485,22.559)
C6: (-16.358,-60.998,19.541)
C5: (-15.560,-61.719,20.335)
O3': (-17.569,-56.152,18.139)
C4: (-20.050,-62.962,21.942)
N3: (-19.353,-63.178,20.760)
OP1: (-24.165,-57.242,20.371)
OP2: (-23.955,-56.478,17.946)
C2: (-19.737,-62.829,19.481)
C1': (-21.429,-61.782,18.092)
C3': (-23.002,-60.570,16.825)
O5': (-22.630,-58.441,18.786)
O4': (-20.813,-60.555,17.758)
C5': (-21.877,-58.392,17.584)
P: (-23.952,-57.576,18.945)
C4': (-21.719,-59.755,16.961)
C2': (-22.928,-61.521,18.016)
O2': (-23.665,-62.719,17.867)
N1: (-20.959,-62.182,19.427)
O4: (-19.570,-63.341,23.017)
O2: (-19.055,-63.055,18.483)
C6: (-21.710,-61.937,20.557)
C5: (-21.308,-62.293,21.781)
O3': (-22.942,-61.321,15.617)
N3: (-19.353,-63.178,20.760)
OP1: (-24.165,-57.242,20.371)
OP2: (-23.955,-56.478,17.946)
C2: (-19.737,-62.829,19.481)
C1': (-21.429,-61.782,18.092)
C3': (-23.002,-60.570,16.825)
O5': (-22.630,-58.441,18.786)
O4': (-20.813,-60.555,17.758)
C5': (-21.877,-58.392,17.584)
P: (-23.952,-57.576,18.945)
C4': (-21.719,-59.755,16.961)
C2': (-22.928,-61.521,18.016)
O2': (-23.665,-62.719,17.867)
N1: (-20.959,-62.182,19.427)
O4: (-19.570,-63.341,23.017)
O2: (-19.055,-63.055,18.483)
C6: (-21.710,-61.937,20.557)
C5: (-21.308,-62.293,21.781)
O3': (-22.942,-61.321,15.617)
Image (generated by PyMOL):