Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1997:1996
Extra
PDB:
ATOM 1 O3' U A 996 31.638 -49.733 19.669 1.00 46.30 O
ATOM 2 P A A 997 32.964 -49.985 20.609 1.00 46.49 P
ATOM 3 OP1 A A 997 33.936 -50.766 19.754 1.00 46.91 O
ATOM 4 OP2 A A 997 32.508 -50.580 21.906 1.00 46.29 O
ATOM 5 O5' A A 997 33.501 -48.498 20.867 1.00 45.98 O
ATOM 6 C5' A A 997 33.632 -47.594 19.796 1.00 46.07 C
ATOM 7 C4' A A 997 33.734 -46.185 20.278 1.00 45.56 C
ATOM 8 O4' A A 997 32.419 -45.700 20.665 1.00 45.41 O
ATOM 9 C3' A A 997 34.567 -45.962 21.526 1.00 45.08 C
ATOM 10 O3' A A 997 35.968 -46.021 21.310 1.00 45.09 O
ATOM 11 C2' A A 997 34.045 -44.608 22.007 1.00 44.64 C
ATOM 12 O2' A A 997 34.506 -43.557 21.173 1.00 44.62 O
ATOM 13 C1' A A 997 32.545 -44.795 21.758 1.00 44.85 C
ATOM 14 N9 A A 997 31.898 -45.394 22.937 1.00 44.69 N
ATOM 15 C8 A A 997 31.686 -46.727 23.156 1.00 44.97 C
ATOM 16 N7 A A 997 31.183 -46.946 24.340 1.00 44.72 N
ATOM 17 C5 A A 997 31.063 -45.685 24.934 1.00 44.26 C
ATOM 18 C6 A A 997 30.576 -45.239 26.186 1.00 43.84 C
ATOM 19 N6 A A 997 30.090 -46.057 27.115 1.00 43.82 N
ATOM 20 N1 A A 997 30.567 -43.902 26.438 1.00 43.46 N
ATOM 21 C2 A A 997 31.069 -43.087 25.499 1.00 43.49 C
ATOM 22 N3 A A 997 31.563 -43.388 24.299 1.00 43.86 N
ATOM 23 C4 A A 997 31.510 -44.712 24.066 1.00 44.24 C
ATOM 24 P A A 998 36.953 -46.382 22.546 1.00 48.11 P
ATOM 25 OP1 A A 998 38.215 -46.939 21.954 1.00 48.37 O
ATOM 26 OP2 A A 998 36.182 -47.213 23.525 1.00 48.07 O
ATOM 27 O5' A A 998 37.226 -44.952 23.205 1.00 47.56 O
TER
ATOM 1 O3' U B 995 26.660 -52.132 23.090 1.00 50.63 O
ATOM 2 P U B 996 28.132 -51.644 23.488 1.00 45.94 P
ATOM 3 OP1 U B 996 29.045 -52.805 23.456 1.00 46.21 O
ATOM 4 OP2 U B 996 27.978 -50.856 24.778 1.00 45.37 O
ATOM 5 O5' U B 996 28.487 -50.664 22.297 1.00 45.99 O
ATOM 6 C5' U B 996 29.210 -51.101 21.163 1.00 46.40 C
ATOM 7 C4' U B 996 29.268 -50.009 20.140 1.00 46.41 C
ATOM 8 O4' U B 996 28.176 -49.074 20.369 1.00 46.18 O
ATOM 9 C3' U B 996 30.477 -49.121 20.195 1.00 46.06 C
ATOM 10 O3' U B 996 31.638 -49.733 19.669 1.00 46.30 O
ATOM 11 C2' U B 996 30.004 -47.889 19.433 1.00 46.01 C
ATOM 12 O2' U B 996 29.984 -48.117 18.037 1.00 46.52 O
ATOM 13 C1' U B 996 28.558 -47.787 19.921 1.00 45.95 C
ATOM 14 N1 U B 996 28.417 -46.826 21.039 1.00 45.37 N
ATOM 15 C2 U B 996 28.684 -45.471 20.748 1.00 45.11 C
ATOM 16 O2 U B 996 28.994 -45.007 19.639 1.00 45.31 O
ATOM 17 N3 U B 996 28.592 -44.658 21.849 1.00 44.59 N
ATOM 18 C4 U B 996 28.284 -45.066 23.122 1.00 44.34 C
ATOM 19 O4 U B 996 28.213 -44.177 23.942 1.00 43.90 O
ATOM 20 C5 U B 996 28.055 -46.462 23.372 1.00 44.62 C
ATOM 21 C6 U B 996 28.126 -47.279 22.322 1.00 45.13 C
ATOM 22 P A B 997 32.964 -49.985 20.609 1.00 46.49 P
ATOM 23 OP1 A B 997 33.936 -50.766 19.754 1.00 46.91 O
ATOM 24 OP2 A B 997 32.508 -50.580 21.906 1.00 46.29 O
ATOM 25 O5' A B 997 33.501 -48.498 20.867 1.00 45.98 O
TER
ATOM 2 P A A 997 32.964 -49.985 20.609 1.00 46.49 P
ATOM 3 OP1 A A 997 33.936 -50.766 19.754 1.00 46.91 O
ATOM 4 OP2 A A 997 32.508 -50.580 21.906 1.00 46.29 O
ATOM 5 O5' A A 997 33.501 -48.498 20.867 1.00 45.98 O
ATOM 6 C5' A A 997 33.632 -47.594 19.796 1.00 46.07 C
ATOM 7 C4' A A 997 33.734 -46.185 20.278 1.00 45.56 C
ATOM 8 O4' A A 997 32.419 -45.700 20.665 1.00 45.41 O
ATOM 9 C3' A A 997 34.567 -45.962 21.526 1.00 45.08 C
ATOM 10 O3' A A 997 35.968 -46.021 21.310 1.00 45.09 O
ATOM 11 C2' A A 997 34.045 -44.608 22.007 1.00 44.64 C
ATOM 12 O2' A A 997 34.506 -43.557 21.173 1.00 44.62 O
ATOM 13 C1' A A 997 32.545 -44.795 21.758 1.00 44.85 C
ATOM 14 N9 A A 997 31.898 -45.394 22.937 1.00 44.69 N
ATOM 15 C8 A A 997 31.686 -46.727 23.156 1.00 44.97 C
ATOM 16 N7 A A 997 31.183 -46.946 24.340 1.00 44.72 N
ATOM 17 C5 A A 997 31.063 -45.685 24.934 1.00 44.26 C
ATOM 18 C6 A A 997 30.576 -45.239 26.186 1.00 43.84 C
ATOM 19 N6 A A 997 30.090 -46.057 27.115 1.00 43.82 N
ATOM 20 N1 A A 997 30.567 -43.902 26.438 1.00 43.46 N
ATOM 21 C2 A A 997 31.069 -43.087 25.499 1.00 43.49 C
ATOM 22 N3 A A 997 31.563 -43.388 24.299 1.00 43.86 N
ATOM 23 C4 A A 997 31.510 -44.712 24.066 1.00 44.24 C
ATOM 24 P A A 998 36.953 -46.382 22.546 1.00 48.11 P
ATOM 25 OP1 A A 998 38.215 -46.939 21.954 1.00 48.37 O
ATOM 26 OP2 A A 998 36.182 -47.213 23.525 1.00 48.07 O
ATOM 27 O5' A A 998 37.226 -44.952 23.205 1.00 47.56 O
TER
ATOM 1 O3' U B 995 26.660 -52.132 23.090 1.00 50.63 O
ATOM 2 P U B 996 28.132 -51.644 23.488 1.00 45.94 P
ATOM 3 OP1 U B 996 29.045 -52.805 23.456 1.00 46.21 O
ATOM 4 OP2 U B 996 27.978 -50.856 24.778 1.00 45.37 O
ATOM 5 O5' U B 996 28.487 -50.664 22.297 1.00 45.99 O
ATOM 6 C5' U B 996 29.210 -51.101 21.163 1.00 46.40 C
ATOM 7 C4' U B 996 29.268 -50.009 20.140 1.00 46.41 C
ATOM 8 O4' U B 996 28.176 -49.074 20.369 1.00 46.18 O
ATOM 9 C3' U B 996 30.477 -49.121 20.195 1.00 46.06 C
ATOM 10 O3' U B 996 31.638 -49.733 19.669 1.00 46.30 O
ATOM 11 C2' U B 996 30.004 -47.889 19.433 1.00 46.01 C
ATOM 12 O2' U B 996 29.984 -48.117 18.037 1.00 46.52 O
ATOM 13 C1' U B 996 28.558 -47.787 19.921 1.00 45.95 C
ATOM 14 N1 U B 996 28.417 -46.826 21.039 1.00 45.37 N
ATOM 15 C2 U B 996 28.684 -45.471 20.748 1.00 45.11 C
ATOM 16 O2 U B 996 28.994 -45.007 19.639 1.00 45.31 O
ATOM 17 N3 U B 996 28.592 -44.658 21.849 1.00 44.59 N
ATOM 18 C4 U B 996 28.284 -45.066 23.122 1.00 44.34 C
ATOM 19 O4 U B 996 28.213 -44.177 23.942 1.00 43.90 O
ATOM 20 C5 U B 996 28.055 -46.462 23.372 1.00 44.62 C
ATOM 21 C6 U B 996 28.126 -47.279 22.322 1.00 45.13 C
ATOM 22 P A B 997 32.964 -49.985 20.609 1.00 46.49 P
ATOM 23 OP1 A B 997 33.936 -50.766 19.754 1.00 46.91 O
ATOM 24 OP2 A B 997 32.508 -50.580 21.906 1.00 46.29 O
ATOM 25 O5' A B 997 33.501 -48.498 20.867 1.00 45.98 O
TER
Atoms:
OP1: (33.936,-50.766,19.754)
OP2: (32.508,-50.580,21.906)
C3': (34.567,-45.962,21.526)
C1': (32.545,-44.795,21.758)
C5': (33.632,-47.594,19.796)
O4': (32.419,-45.700,20.665)
C8: (31.686,-46.727,23.156)
O2': (34.506,-43.557,21.173)
C6: (30.576,-45.239,26.186)
C5: (31.063,-45.685,24.934)
C4: (31.510,-44.712,24.066)
P: (32.964,-49.985,20.609)
C4': (33.734,-46.185,20.278)
C2': (34.045,-44.608,22.007)
C2: (31.069,-43.087,25.499)
N1: (30.567,-43.902,26.438)
N3: (31.563,-43.388,24.299)
N6: (30.090,-46.057,27.115)
N7: (31.183,-46.946,24.340)
N9: (31.898,-45.394,22.937)
O5': (33.501,-48.498,20.867)
O3': (35.968,-46.021,21.310)
OP2: (32.508,-50.580,21.906)
C3': (34.567,-45.962,21.526)
C1': (32.545,-44.795,21.758)
C5': (33.632,-47.594,19.796)
O4': (32.419,-45.700,20.665)
C8: (31.686,-46.727,23.156)
O2': (34.506,-43.557,21.173)
C6: (30.576,-45.239,26.186)
C5: (31.063,-45.685,24.934)
C4: (31.510,-44.712,24.066)
P: (32.964,-49.985,20.609)
C4': (33.734,-46.185,20.278)
C2': (34.045,-44.608,22.007)
C2: (31.069,-43.087,25.499)
N1: (30.567,-43.902,26.438)
N3: (31.563,-43.388,24.299)
N6: (30.090,-46.057,27.115)
N7: (31.183,-46.946,24.340)
N9: (31.898,-45.394,22.937)
O5': (33.501,-48.498,20.867)
O3': (35.968,-46.021,21.310)
C4: (28.284,-45.066,23.122)
N3: (28.592,-44.658,21.849)
OP1: (29.045,-52.805,23.456)
OP2: (27.978,-50.856,24.778)
C2: (28.684,-45.471,20.748)
C1': (28.558,-47.787,19.921)
C3': (30.477,-49.121,20.195)
O5': (28.487,-50.664,22.297)
O4': (28.176,-49.074,20.369)
C5': (29.210,-51.101,21.163)
P: (28.132,-51.644,23.488)
C4': (29.268,-50.009,20.140)
C2': (30.004,-47.889,19.433)
O2': (29.984,-48.117,18.037)
N1: (28.417,-46.826,21.039)
O4: (28.213,-44.177,23.942)
O2: (28.994,-45.007,19.639)
C6: (28.126,-47.279,22.322)
C5: (28.055,-46.462,23.372)
O3': (31.638,-49.733,19.669)
N3: (28.592,-44.658,21.849)
OP1: (29.045,-52.805,23.456)
OP2: (27.978,-50.856,24.778)
C2: (28.684,-45.471,20.748)
C1': (28.558,-47.787,19.921)
C3': (30.477,-49.121,20.195)
O5': (28.487,-50.664,22.297)
O4': (28.176,-49.074,20.369)
C5': (29.210,-51.101,21.163)
P: (28.132,-51.644,23.488)
C4': (29.268,-50.009,20.140)
C2': (30.004,-47.889,19.433)
O2': (29.984,-48.117,18.037)
N1: (28.417,-46.826,21.039)
O4: (28.213,-44.177,23.942)
O2: (28.994,-45.007,19.639)
C6: (28.126,-47.279,22.322)
C5: (28.055,-46.462,23.372)
O3': (31.638,-49.733,19.669)
Image (generated by PyMOL):