ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A241:A243

Extra

PDB:
ATOM 1 O3' G A 240 -57.248 16.228 -33.446 1.00 41.40 O
ATOM 2 P A A 241 -56.087 16.834 -32.519 1.00 34.30 P
ATOM 3 OP1 A A 241 -56.710 17.173 -31.221 1.00 34.30 O
ATOM 4 OP2 A A 241 -55.419 17.905 -33.290 1.00 34.30 O
ATOM 5 O5' A A 241 -55.093 15.617 -32.335 1.00 34.30 O
ATOM 6 C5' A A 241 -55.489 14.473 -31.601 1.00 34.30 C
ATOM 7 C4' A A 241 -54.629 14.271 -30.382 1.00 34.30 C
ATOM 8 O4' A A 241 -53.257 14.071 -30.800 1.00 34.30 O
ATOM 9 C3' A A 241 -54.604 15.429 -29.399 1.00 34.30 C
ATOM 10 O3' A A 241 -54.402 14.920 -28.075 1.00 34.30 O
ATOM 11 C2' A A 241 -53.377 16.212 -29.844 1.00 34.30 C
ATOM 12 O2' A A 241 -52.803 17.008 -28.837 1.00 34.30 O
ATOM 13 C1' A A 241 -52.437 15.089 -30.278 1.00 34.30 C
ATOM 14 N9 A A 241 -51.500 15.463 -31.331 1.00 33.92 N
ATOM 15 C8 A A 241 -51.595 16.446 -32.280 1.00 33.92 C
ATOM 16 N7 A A 241 -50.578 16.479 -33.110 1.00 33.92 N
ATOM 17 C5 A A 241 -49.783 15.444 -32.679 1.00 33.92 C
ATOM 18 C6 A A 241 -48.566 14.970 -33.142 1.00 33.92 C
ATOM 19 N6 A A 241 -47.921 15.498 -34.176 1.00 33.92 N
ATOM 20 N1 A A 241 -48.031 13.919 -32.502 1.00 33.92 N
ATOM 21 C2 A A 241 -48.701 13.404 -31.464 1.00 33.92 C
ATOM 22 N3 A A 241 -49.861 13.771 -30.929 1.00 33.92 N
ATOM 23 C4 A A 241 -50.343 14.809 -31.600 1.00 33.92 C
ATOM 24 P U A 242 -55.626 14.842 -27.022 1.00 12.94 P
ATOM 25 OP1 U A 242 -56.702 15.754 -27.505 1.00 12.94 O
ATOM 26 OP2 U A 242 -55.040 15.063 -25.658 1.00 12.94 O
ATOM 27 O5' U A 242 -56.137 13.348 -27.160 1.00 12.94 O
TER

ATOM 1 O3' U B 242 -56.678 9.946 -29.898 1.00 12.94 O
ATOM 2 P U B 243 -55.390 9.683 -30.818 1.00 33.82 P
ATOM 3 OP1 U B 243 -55.720 10.169 -32.178 1.00 33.82 O
ATOM 4 OP2 U B 243 -55.023 8.262 -30.639 1.00 33.82 O
ATOM 5 O5' U B 243 -54.272 10.621 -30.179 1.00 33.82 O
ATOM 6 C5' U B 243 -53.409 10.155 -29.153 1.00 33.82 C
ATOM 7 C4' U B 243 -52.166 9.512 -29.718 1.00 33.82 C
ATOM 8 O4' U B 243 -52.255 9.457 -31.159 1.00 33.82 O
ATOM 9 C3' U B 243 -50.835 10.224 -29.475 1.00 33.82 C
ATOM 10 O3' U B 243 -50.321 10.051 -28.166 1.00 33.82 O
ATOM 11 C2' U B 243 -49.958 9.602 -30.542 1.00 33.82 C
ATOM 12 O2' U B 243 -49.498 8.316 -30.143 1.00 33.82 O
ATOM 13 C1' U B 243 -50.956 9.447 -31.698 1.00 33.82 C
ATOM 14 N1 U B 243 -50.816 10.546 -32.654 1.00 34.30 N
ATOM 15 C2 U B 243 -49.665 10.275 -33.339 1.00 34.30 C
ATOM 16 O2 U B 243 -49.010 9.255 -33.117 1.00 34.30 O
ATOM 17 N3 U B 243 -49.300 11.187 -34.265 1.00 34.30 N
ATOM 18 C4 U B 243 -50.016 12.346 -34.529 1.00 34.30 C
ATOM 19 O4 U B 243 -49.598 13.099 -35.392 1.00 34.30 O
ATOM 20 C5 U B 243 -51.198 12.588 -33.763 1.00 34.30 C
ATOM 21 C6 U B 243 -51.561 11.689 -32.842 1.00 34.30 C
ATOM 22 P A B 244 -49.320 11.146 -27.531 1.00 32.62 P
ATOM 23 OP1 A B 244 -48.757 10.557 -26.283 1.00 32.62 O
ATOM 24 OP2 A B 244 -50.073 12.419 -27.444 1.00 32.62 O
ATOM 25 O5' A B 244 -48.171 11.273 -28.628 1.00 32.62 O
TER

Atoms:
OP1: (-56.710,17.173,-31.221)
OP2: (-55.419,17.905,-33.290)
C3': (-54.604,15.429,-29.399)
C1': (-52.437,15.089,-30.278)
C5': (-55.489,14.473,-31.601)
O4': (-53.257,14.071,-30.800)
C8: (-51.595,16.446,-32.280)
O2': (-52.803,17.008,-28.837)
C6: (-48.566,14.970,-33.142)
C5: (-49.783,15.444,-32.679)
C4: (-50.343,14.809,-31.600)
P: (-56.087,16.834,-32.519)
C4': (-54.629,14.271,-30.382)
C2': (-53.377,16.212,-29.844)
C2: (-48.701,13.404,-31.464)
N1: (-48.031,13.919,-32.502)
N3: (-49.861,13.771,-30.929)
N6: (-47.921,15.498,-34.176)
N7: (-50.578,16.479,-33.110)
N9: (-51.500,15.463,-31.331)
O5': (-55.093,15.617,-32.335)
O3': (-54.402,14.920,-28.075)
C4: (-50.016,12.346,-34.529)
N3: (-49.300,11.187,-34.265)
OP1: (-55.720,10.169,-32.178)
OP2: (-55.023,8.262,-30.639)
C2: (-49.665,10.275,-33.339)
C1': (-50.956,9.447,-31.698)
C3': (-50.835,10.224,-29.475)
O5': (-54.272,10.621,-30.179)
O4': (-52.255,9.457,-31.159)
C5': (-53.409,10.155,-29.153)
P: (-55.390,9.683,-30.818)
C4': (-52.166,9.512,-29.718)
C2': (-49.958,9.602,-30.542)
O2': (-49.498,8.316,-30.143)
N1: (-50.816,10.546,-32.654)
O4: (-49.598,13.099,-35.392)
O2: (-49.010,9.255,-33.117)
C6: (-51.561,11.689,-32.842)
C5: (-51.198,12.588,-33.763)
O3': (-50.321,10.051,-28.166)
Image (generated by PyMOL):
PyMOL image
show in jmol